Personal tools

UBERON:0009201: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{UBERON |id=UBERON:0009201 |name=nephric duct |namespace= |def="A nephric duct is a tube that drains a primitive kidney[GO]." [GO:0072176] |xref= |is_a=UBERON:0000058;;...")
 
No edit summary
Line 21: Line 21:
|part_of=UBERON:0002113
|part_of=UBERON:0002113
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|preceded_by=
}}
}}

Revision as of 17:26, 15 June 2012

Name:nephric duct
Definition:"A nephric duct is a tube that drains a primitive kidney[GO]." [GO:0072176]
Comments:pronephric duct or mesonephric duct

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000058(duct),UBERON:0003914(epithelial tube),UBERON:0004819(kidney epithelium),UBERON:0006553(renal duct),UBERON:0006555(excretory tube)
part_of:UBERON:0002113(kidney)



Children

is a:UBERON:0003060 (pronephric duct),UBERON:0003074 (mesonephric duct)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0009201 (nephric duct), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.58e-86FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_e2abe83880ba1d2bc690a5cf9591ad22p4@Spink12
1.58e-86FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_e2abe83880ba1d2bc690a5cf9591ad22p4@Spink12
3.28e-58FFCP PHASE2:Mm9::chr6:54359310..54359337,-#_006addc8dc83332a4f4d9db9adb060d7p@chr6:54359310..54359337, -
3.28e-58FFCP PHASE2:Mm9::chr13:21383212..21383225,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21383212..21383225, -
3.28e-58FFCP PHASE1:Mm9::chr13:21383212..21383225,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21383212..21383225, -
3.28e-58FFCP PHASE2:Mm9::chr14:66521865..66521876,+#_006addc8dc83332a4f4d9db9adb060d7p@chr14:66521865..66521876, +
3.28e-58FFCP PHASE2:Mm9::chr5:75559819..75559830,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:75559819..75559830, +
3.28e-58FFCP PHASE1:Mm9::chr1:90156002..90156013,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:90156002..90156013, +
3.28e-58FFCP PHASE1:Mm9::chr16:23308115..23308126,+#_006addc8dc83332a4f4d9db9adb060d7p@chr16:23308115..23308126, +
3.28e-58FFCP PHASE2:Mm9::chr2:75866210..75866235,+#_006addc8dc83332a4f4d9db9adb060d7p@chr2:75866210..75866235, +
3.28e-58FFCP PHASE2:Mm9::chr2:164479340..164479350,+#_006addc8dc83332a4f4d9db9adb060d7p@chr2:164479340..164479350, +
3.28e-58FFCP PHASE2:Mm9::chr17:24670830..24670845,+#_006addc8dc83332a4f4d9db9adb060d7p@chr17:24670830..24670845, +
3.28e-58FFCP PHASE2:Mm9::chr1:89596972..89596981,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:89596972..89596981, +
3.28e-58FFCP PHASE1:Mm9::chr1:155698178..155698191,-#_006addc8dc83332a4f4d9db9adb060d7p@chr1:155698178..155698191, -
3.28e-58FFCP PHASE1:Mm9::chr18:44261480..44261486,+#_006addc8dc83332a4f4d9db9adb060d7p@chr18:44261480..44261486, +
3.28e-58FFCP PHASE2:Mm9::chr12:16663110..16663116,+#_006addc8dc83332a4f4d9db9adb060d7p3@Ntsr2
3.28e-58FFCP PHASE2:Mm9::chr8:96014490..96014496,+#_006addc8dc83332a4f4d9db9adb060d7p@chr8:96014490..96014496, +
3.28e-58FFCP PHASE1:Mm9::chr9:35657557..35657582,-#_006addc8dc83332a4f4d9db9adb060d7p2@Gm3428
3.28e-58FFCP PHASE2:Mm9::chr8:23057222..23057234,+#_006addc8dc83332a4f4d9db9adb060d7p1@Defb13
3.28e-58FFCP PHASE1:Mm9::chr2:164464249..164464258,-#_006addc8dc83332a4f4d9db9adb060d7p@chr2:164464249..164464258, -
3.28e-58FFCP PHASE2:Mm9::chr13:21378774..21378782,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21378774..21378782, -
3.28e-58FFCP PHASE2:Mm9::chr11:101959194..101959224,-#_006addc8dc83332a4f4d9db9adb060d7p@chr11:101959194..101959224, -
3.28e-58FFCP PHASE1:Mm9::chr15:54678915..54678922,-#_006addc8dc83332a4f4d9db9adb060d7p@chr15:54678915..54678922, -
3.28e-58FFCP PHASE2:Mm9::chr2:152302768..152302774,+#_006addc8dc83332a4f4d9db9adb060d7p4@Defb20
3.28e-58FFCP PHASE1:Mm9::chr1:192816674..192816714,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:192816674..192816714, +
3.28e-58FFCP PHASE2:Mm9::chrX:20422498..20422506,+#_006addc8dc83332a4f4d9db9adb060d7p@chrX:20422498..20422506, +
3.28e-58FFCP PHASE1:Mm9::chr1:89597818..89597827,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:89597818..89597827, +
3.28e-58FFCP PHASE2:Mm9::chr2:25349414..25349424,-#_006addc8dc83332a4f4d9db9adb060d7p5@Lcn12
3.28e-58FFCP PHASE2:Mm9::chr2:164439019..164439029,+#_006addc8dc83332a4f4d9db9adb060d7p1@Wfdc6b
3.28e-58FFCP PHASE1:Mm9::chr8:22061721..22061728,-#_006addc8dc83332a4f4d9db9adb060d7p2@Gm6040, p2@LOC100503992
3.28e-58FFCP PHASE2:Mm9::chr17:14306714..14306740,+#_006addc8dc83332a4f4d9db9adb060d7p@chr17:14306714..14306740, +
3.28e-58FFCP PHASE2:Mm9::chr2:148676859..148676866,-#_006addc8dc83332a4f4d9db9adb060d7p5@9230104L09Rik
3.28e-58FFCP PHASE2:Mm9::chr3:103650758..103650778,+#_006addc8dc83332a4f4d9db9adb060d7p@chr3:103650758..103650778, +
3.28e-58FFCP PHASE2:Mm9::chr10:127470322..127470326,+#_006addc8dc83332a4f4d9db9adb060d7p@chr10:127470322..127470326, +
3.28e-58FFCP PHASE2:Mm9::chr4:40010825..40010844,-#_006addc8dc83332a4f4d9db9adb060d7p@chr4:40010825..40010844, -
3.28e-58FFCP PHASE2:Mm9::chr10:56515486..56515496,+#_006addc8dc83332a4f4d9db9adb060d7p@chr10:56515486..56515496, +
3.28e-58FFCP PHASE1:Mm9::chr2:167480413..167480463,-#_006addc8dc83332a4f4d9db9adb060d7p@chr2:167480413..167480463, -
3.28e-58FFCP PHASE2:Mm9::chr8:113585714..113585722,-#_006addc8dc83332a4f4d9db9adb060d7p@chr8:113585714..113585722, -
3.28e-58FFCP PHASE2:Mm9::chr13:21379306..21379315,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21379306..21379315, -
3.28e-58FFCP PHASE2:Mm9::chr9:35651788..35651804,-#_006addc8dc83332a4f4d9db9adb060d7p1@9230110F15Rik
3.28e-58FFCP PHASE2:Mm9::chr2:172632171..172632178,-#_006addc8dc83332a4f4d9db9adb060d7p@chr2:172632171..172632178, -
3.28e-58FFCP PHASE1:Mm9::chr11:101958887..101958896,-#_006addc8dc83332a4f4d9db9adb060d7p@chr11:101958887..101958896, -
3.28e-58FFCP PHASE2:Mm9::chr2:167480413..167480463,-#_006addc8dc83332a4f4d9db9adb060d7p@chr2:167480413..167480463, -
3.28e-58FFCP PHASE2:Mm9::chr11:59845376..59845393,-#_006addc8dc83332a4f4d9db9adb060d7p@chr11:59845376..59845393, -
3.28e-58FFCP PHASE2:Mm9::chr18:74784728..74784738,+#_006addc8dc83332a4f4d9db9adb060d7p@chr18:74784728..74784738, +
3.28e-58FFCP PHASE1:Mm9::chr1:87922778..87922788,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:87922778..87922788, +
3.28e-58FFCP PHASE2:Mm9::chr9:26688157..26688159,-#_006addc8dc83332a4f4d9db9adb060d7p@chr9:26688157..26688159, -
3.28e-58FFCP PHASE1:Mm9::chr10:116399500..116399516,+#_006addc8dc83332a4f4d9db9adb060d7p@chr10:116399500..116399516, +
3.28e-58FFCP PHASE2:Mm9::chr14:52542661..52542668,-#_006addc8dc83332a4f4d9db9adb060d7p3@Rnase13
3.28e-58FFCP PHASE2:Mm9::chr14:103746280..103746298,+#_006addc8dc83332a4f4d9db9adb060d7p@chr14:103746280..103746298, +
3.28e-58FFCP PHASE1:Mm9::chr8:19141447..19141469,+#_006addc8dc83332a4f4d9db9adb060d7p@chr8:19141447..19141469, +
3.28e-58FFCP PHASE2:Mm9::chrX:130496372..130496393,-#_006addc8dc83332a4f4d9db9adb060d7p@chrX:130496372..130496393, -
3.28e-58FFCP PHASE2:Mm9::chr13:23683348..23683398,+#_006addc8dc83332a4f4d9db9adb060d7p@chr13:23683348..23683398, +
3.28e-58FFCP PHASE1:Mm9::chr12:110131571..110131579,-#_006addc8dc83332a4f4d9db9adb060d7p15@Wars
3.28e-58FFCP PHASE2:Mm9::chr8:19141429..19141440,+#_006addc8dc83332a4f4d9db9adb060d7p@chr8:19141429..19141440, +
3.28e-58FFCP PHASE1:Mm9::chr16:43230846..43230884,+#_006addc8dc83332a4f4d9db9adb060d7p@chr16:43230846..43230884, +
3.28e-58FFCP PHASE2:Mm9::chr9:34813361..34813403,-#_006addc8dc83332a4f4d9db9adb060d7p@chr9:34813361..34813403, -
3.28e-58FFCP PHASE1:Mm9::chr11:34107586..34107593,-#_006addc8dc83332a4f4d9db9adb060d7p@chr11:34107586..34107593, -
3.28e-58FFCP PHASE1:Mm9::chr10:56515486..56515496,+#_006addc8dc83332a4f4d9db9adb060d7p@chr10:56515486..56515496, +
3.28e-58FFCP PHASE2:Mm9::chr1:90155966..90155989,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:90155966..90155989, +
3.28e-58FFCP PHASE1:Mm9::chr13:21378774..21378782,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21378774..21378782, -
3.28e-58FFCP PHASE2:Mm9::chr14:51627616..51627623,+#_006addc8dc83332a4f4d9db9adb060d7p2@Rnase10
3.28e-58FFCP PHASE1:Mm9::chrX:50280152..50280179,+#_006addc8dc83332a4f4d9db9adb060d7p@chrX:50280152..50280179, +
3.28e-58FFCP PHASE1:Mm9::chr5:31379878..31379883,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:31379878..31379883, +
3.28e-58FFCP PHASE2:Mm9::chrX:103276578..103276585,+#_006addc8dc83332a4f4d9db9adb060d7p@chrX:103276578..103276585, +
3.28e-58FFCP PHASE2:Mm9::chr13:21379118..21379120,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21379118..21379120, -
3.28e-58FFCP PHASE2:Mm9::chr9:35585507..35585517,-#_006addc8dc83332a4f4d9db9adb060d7p4@Gm17727
3.28e-58FFCP PHASE1:Mm9::chr11:96140694..96140720,+#_006addc8dc83332a4f4d9db9adb060d7p@chr11:96140694..96140720, +
3.28e-58FFCP PHASE1:Mm9::chr9:70761885..70761895,+#_006addc8dc83332a4f4d9db9adb060d7p@chr9:70761885..70761895, +
3.28e-58FFCP PHASE1:Mm9::chr5:75559819..75559830,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:75559819..75559830, +
3.28e-58FFCP PHASE1:Mm9::chr8:19062951..19062955,+#_006addc8dc83332a4f4d9db9adb060d7p@chr8:19062951..19062955, +
3.28e-58FFCP PHASE2:Mm9::chr5:31379477..31379481,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:31379477..31379481, +
3.28e-58FFCP PHASE1:Mm9::chr5:110773580..110773589,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:110773580..110773589, +
3.28e-58FFCP PHASE2:Mm9::chr18:44264128..44264135,+#_006addc8dc83332a4f4d9db9adb060d7p5@Spink12
3.28e-58FFCP PHASE2:Mm9::chr6:118298429..118298448,+#_006addc8dc83332a4f4d9db9adb060d7p@chr6:118298429..118298448, +
3.28e-58FFCP PHASE1:Mm9::chr11:116901540..116901549,-#_006addc8dc83332a4f4d9db9adb060d7p4@uc007mmw.1
3.28e-58FFCP PHASE2:Mm9::chr1:89597834..89597840,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:89597834..89597840, +
3.28e-58FFCP PHASE1:Mm9::chr1:155738967..155738974,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:155738967..155738974, +
3.28e-58FFCP PHASE2:Mm9::chr11:116901629..116901639,-#_006addc8dc83332a4f4d9db9adb060d7p3@uc007mmw.1
3.28e-58FFCP PHASE1:Mm9::chr2:164479326..164479336,+#_006addc8dc83332a4f4d9db9adb060d7p@chr2:164479326..164479336, +
3.28e-58FFCP PHASE1:Mm9::chr2:148625223..148625234,+#_006addc8dc83332a4f4d9db9adb060d7p@chr2:148625223..148625234, +
3.28e-58FFCP PHASE2:Mm9::chr13:21378871..21378901,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21378871..21378901, -
3.28e-58FFCP PHASE1:Mm9::chr17:14306714..14306740,+#_006addc8dc83332a4f4d9db9adb060d7p@chr17:14306714..14306740, +
3.28e-58FFCP PHASE1:Mm9::chr15:72756032..72756041,-#_006addc8dc83332a4f4d9db9adb060d7p@chr15:72756032..72756041, -
3.28e-58FFCP PHASE2:Mm9::chr13:52712744..52712754,+#_006addc8dc83332a4f4d9db9adb060d7p@chr13:52712744..52712754, +
3.28e-58FFCP PHASE2:Mm9::chr2:74440187..74440209,-#_006addc8dc83332a4f4d9db9adb060d7p@chr2:74440187..74440209, -
3.28e-58FFCP PHASE2:Mm9::chr9:26611214..26611227,-#_006addc8dc83332a4f4d9db9adb060d7p@chr9:26611214..26611227, -
3.28e-58FFCP PHASE1:Mm9::chr13:21379322..21379338,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21379322..21379338, -
3.28e-58FFCP PHASE2:Mm9::chr7:151928014..151928021,+#_006addc8dc83332a4f4d9db9adb060d7p@chr7:151928014..151928021, +
3.28e-58FFCP PHASE1:Mm9::chr9:26688157..26688159,-#_006addc8dc83332a4f4d9db9adb060d7p@chr9:26688157..26688159, -
3.28e-58FFCP PHASE1:Mm9::chr5:100634942..100634968,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:100634942..100634968, +
3.28e-58FFCP PHASE2:Mm9::chr16:23308182..23308185,+#_006addc8dc83332a4f4d9db9adb060d7p@chr16:23308182..23308185, +
3.28e-58FFCP PHASE1:Mm9::chr4:106731469..106731481,-#_006addc8dc83332a4f4d9db9adb060d7p@chr4:106731469..106731481, -
3.28e-58FFCP PHASE2:Mm9::chr2:25678985..25679033,+#_006addc8dc83332a4f4d9db9adb060d7p@chr2:25678985..25679033, +
3.28e-58FFCP PHASE1:Mm9::chr12:16664775..16664784,+#_006addc8dc83332a4f4d9db9adb060d7p@chr12:16664775..16664784, +
3.28e-58FFCP PHASE2:Mm9::chr14:69143309..69143319,-#_006addc8dc83332a4f4d9db9adb060d7p@chr14:69143309..69143319, -
3.28e-58FFCP PHASE1:Mm9::chrX:156829476..156829504,+#_006addc8dc83332a4f4d9db9adb060d7p@chrX:156829476..156829504, +
3.28e-58FFCP PHASE1:Mm9::chr9:35651788..35651804,-#_006addc8dc83332a4f4d9db9adb060d7p1@9230110F15Rik
3.28e-58FFCP PHASE2:Mm9::chrX:75798132..75798152,-#_006addc8dc83332a4f4d9db9adb060d7p@chrX:75798132..75798152, -
3.28e-58FFCP PHASE2:Mm9::chr11:101958876..101958883,+#_006addc8dc83332a4f4d9db9adb060d7p@chr11:101958876..101958883, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0009201&oldid=1833415"