UBERON:0003457: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 14: | Line 14: | ||
|obo_creation_date= | |obo_creation_date= | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 17:03, 26 June 2012
| Name: | head bone | ||
|---|---|---|---|
| Definition: | "A bone that is part of a head [Obol]." [OBOL:automatic] | ||
| Xrefs: |
| ||
| Synonyms: |
"adult head bone" EXACT [OBOL:automatic] "adult head bone organ" EXACT [OBOL:automatic] "bone of adult head" EXACT [OBOL:automatic] "bone of head" EXACT [OBOL:automatic] "bone organ of adult head" EXACT [OBOL:automatic] "bone organ of head" EXACT [OBOL:automatic] "head bone organ" EXACT [OBOL:automatic] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0007914(head or neck bone) |
|---|
Children
| is a: | UBERON:0002397 (maxilla),UBERON:0003462 (facial bone),UBERON:0004766 (cranial bone) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10813-111B3 (normal embryonic palatal mesenchymal cell line:HEPM)
- 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
- 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
- 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
- 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
- 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
- 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)
Mouse (Mus musculus)
- 10813-111B3 (normal embryonic palatal mesenchymal cell line:HEPM)
- 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
- 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
- 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
- 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
- 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
- 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003457 (head bone), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE2:Hg19::chr17:54893192..54893195,-#_053239a5c279b55de3cd36b9b14b37cb | p14@C17orf67 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr17:54893192..54893195,-#_053239a5c279b55de3cd36b9b14b37cb | p14@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893213..54893220,-#_a5461e78606393fc6e4c26b3fd452e96 | p12@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:57353655..57353662,-#_a5461e78606393fc6e4c26b3fd452e96 | p@chr8:57353655..57353662, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893269..54893278,-#_a5461e78606393fc6e4c26b3fd452e96 | p11@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:57353655..57353662,-#_a5461e78606393fc6e4c26b3fd452e96 | p@chr8:57353655..57353662, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893213..54893220,-#_a5461e78606393fc6e4c26b3fd452e96 | p12@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893292..54893300,-#_a5461e78606393fc6e4c26b3fd452e96 | p13@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893269..54893278,-#_a5461e78606393fc6e4c26b3fd452e96 | p11@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893292..54893300,-#_a5461e78606393fc6e4c26b3fd452e96 | p13@C17orf67 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:58626291..58626298,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr3:58626291..58626298, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:102297728..102297742,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr14:102297728..102297742, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:133957514..133957529,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr7:133957514..133957529, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:30710416..30710440,-#_df4e2f44fb501671f107a758dc1e06a1 | p2@Otof |
| 1.87e-86 | FFCP PHASE1:Mm9::chr12:13508046..13508055,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr12:13508046..13508055, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:35012397..35012405,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr3:35012397..35012405, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:115556972..115556979,+#_df4e2f44fb501671f107a758dc1e06a1 | p3@Kncn |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:13983102..13983126,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr17:13983102..13983126, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42206784..42206793,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr9:42206784..42206793, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:67011941..67011951,+#_df4e2f44fb501671f107a758dc1e06a1 | p3@Gm1322 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42206730..42206739,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr9:42206730..42206739, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:37195838..37195870,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr13:37195838..37195870, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:114603036..114603048,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr11:114603036..114603048, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr8:125802236..125802251,-#_df4e2f44fb501671f107a758dc1e06a1 | p3@Fanca |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:69811606..69811616,+#_df4e2f44fb501671f107a758dc1e06a1 | p2@Otol1 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:81327205..81327211,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr18:81327205..81327211, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:11599532..11599539,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr11:11599532..11599539, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:77084875..77084885,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr12:77084875..77084885, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:115556972..115556979,+#_df4e2f44fb501671f107a758dc1e06a1 | p3@Kncn |
| 1.87e-86 | FFCP PHASE1:Mm9::chr16:45693840..45693856,-#_df4e2f44fb501671f107a758dc1e06a1 | p1@Tmprss7 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:47293496..47293510,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr14:47293496..47293510, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:93218682..93218691,+#_df4e2f44fb501671f107a758dc1e06a1 | p2@Espnl |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:4689776..4689785,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr11:4689776..4689785, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:154208086..154208123,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr4:154208086..154208123, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:85334335..85334353,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr15:85334335..85334353, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:113251614..113251623,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr6:113251614..113251623, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:78257454..78257465,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr13:78257454..78257465, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:48087761..48087775,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr13:48087761..48087775, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:20649897..20649907,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr14:20649897..20649907, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:43454162..43454170,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr1:43454162..43454170, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr18:81327205..81327211,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr18:81327205..81327211, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:38104702..38104718,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr18:38104702..38104718, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:27252925..27252939,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr17:27252925..27252939, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:154459246..154459253,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr3:154459246..154459253, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42208023..42208043,-#_df4e2f44fb501671f107a758dc1e06a1 | p4@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr8:13414266..13414279,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr8:13414266..13414279, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:78257454..78257465,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr13:78257454..78257465, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:63733478..63733491,-#_df4e2f44fb501671f107a758dc1e06a1 | p1@Dytn |
| 1.87e-86 | FFCP PHASE2:Mm9::chrX:154140800..154140810,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chrX:154140800..154140810, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr8:94180607..94180619,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr8:94180607..94180619, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:170417150..170417155,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr2:170417150..170417155, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:59222033..59222043,+#_df4e2f44fb501671f107a758dc1e06a1 | p7@A730017C20Rik |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:43454162..43454170,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr1:43454162..43454170, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:107349418..107349423,-#_df4e2f44fb501671f107a758dc1e06a1 | p5@Otogl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:182528388..182528403,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr1:182528388..182528403, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr18:59222033..59222043,+#_df4e2f44fb501671f107a758dc1e06a1 | p7@A730017C20Rik |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:31335869..31335899,-#_df4e2f44fb501671f107a758dc1e06a1 | p1@Tmprss3 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207792..42207805,-#_df4e2f44fb501671f107a758dc1e06a1 | p11@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:133802857..133802884,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr4:133802857..133802884, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:73232344..73232356,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr2:73232344..73232356, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:13983160..13983167,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr17:13983160..13983167, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:86745686..86745727,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr6:86745686..86745727, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207697..42207705,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr9:42207697..42207705, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:88068153..88068160,-#_df4e2f44fb501671f107a758dc1e06a1 | p10@Sec11a |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:107349378..107349390,-#_df4e2f44fb501671f107a758dc1e06a1 | p1@Otogl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:14685072..14685084,+#_df4e2f44fb501671f107a758dc1e06a1 | p41@Cacnb2 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:89215319..89215330,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr15:89215319..89215330, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:88068153..88068160,-#_df4e2f44fb501671f107a758dc1e06a1 | p10@Sec11a |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:21371424..21371435,-#_df4e2f44fb501671f107a758dc1e06a1 | p2@Slc26a5 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:172843796..172843799,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr1:172843796..172843799, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:194818647..194818660,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr1:194818647..194818660, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:68423014..68423037,+#_df4e2f44fb501671f107a758dc1e06a1 | p1@Grxcr1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr16:93971357..93971363,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr16:93971357..93971363, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:50968647..50968668,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr9:50968647..50968668, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:30619378..30619412,-#_df4e2f44fb501671f107a758dc1e06a1 | p11@Tsga14 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:102123535..102123544,+#_df4e2f44fb501671f107a758dc1e06a1 | p5@BC030867 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:35012425..35012439,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr3:35012425..35012439, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:144115382..144115389,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr5:144115382..144115389, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:21028739..21028785,-#_df4e2f44fb501671f107a758dc1e06a1 | p1@Tmc1 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:92087926..92087938,+#_df4e2f44fb501671f107a758dc1e06a1 | p2@Plscr5 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:58626291..58626298,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr3:58626291..58626298, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:154208086..154208123,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr4:154208086..154208123, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:31335903..31335921,-#_df4e2f44fb501671f107a758dc1e06a1 | p2@Tmprss3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:3909290..3909299,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr5:3909290..3909299, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:154459184..154459195,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr3:154459184..154459195, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:172843813..172843834,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr1:172843813..172843834, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:130461150..130461185,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr4:130461150..130461185, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:72652660..72652667,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr5:72652660..72652667, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:81091447..81091464,+#_df4e2f44fb501671f107a758dc1e06a1 | p9@Ankrd24 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:100724698..100724706,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr3:100724698..100724706, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:30619378..30619412,-#_df4e2f44fb501671f107a758dc1e06a1 | p11@Tsga14 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207983..42207995,-#_df4e2f44fb501671f107a758dc1e06a1 | p3@Tecta |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:10536797..10536802,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr19:10536797..10536802, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:56208792..56208814,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr9:56208792..56208814, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207887..42207960,-#_df4e2f44fb501671f107a758dc1e06a1 | p1@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:50968647..50968668,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr9:50968647..50968668, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:121206667..121206674,-#_df4e2f44fb501671f107a758dc1e06a1 | p2@Strc |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:4689837..4689845,-#_df4e2f44fb501671f107a758dc1e06a1 | p@chr11:4689837..4689845, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:102297747..102297765,+#_df4e2f44fb501671f107a758dc1e06a1 | p@chr14:102297747..102297765, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:30710455..30710464,-#_df4e2f44fb501671f107a758dc1e06a1 | p9@Otof |
