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|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
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Revision as of 17:06, 26 June 2012

Name:limb/fin field

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0001048(primordium)



Children

is a:UBERON:0005729 (forelimb/pectoral fin field),UBERON:0005730 (hindlimb/pelvic fin field),UBERON:0005733 (limb field)
develops from:UBERON:0004357 (paired limb/fin bud)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005732 (limb/fin field), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr4:186423235..186423240,-#_2c3d356be744605df720ea8200ea27d2p@chr4:186423235..186423240, -
5.42e-195FFCP PHASE2:Hg19::chr2:76859417..76859418,+#_2c3d356be744605df720ea8200ea27d2p@chr2:76859417..76859418, +
5.42e-195FFCP PHASE1:Hg19::chr10:79759687..79759690,+#_2c3d356be744605df720ea8200ea27d2p@chr10:79759687..79759690, +
5.42e-195FFCP PHASE2:Hg19::chr22:25535147..25535150,+#_2c3d356be744605df720ea8200ea27d2p@chr22:25535147..25535150, +
5.42e-195FFCP PHASE1:Hg19::chr2:179396370..179396375,-#_2c3d356be744605df720ea8200ea27d2p@chr2:179396370..179396375, -
5.42e-195FFCP PHASE2:Hg19::chr7:128483294..128483304,+#_2c3d356be744605df720ea8200ea27d2p@chr7:128483294..128483304, +
5.42e-195FFCP PHASE2:Hg19::chr10:97176812..97176813,+#_2c3d356be744605df720ea8200ea27d2p@chr10:97176812..97176813, +
5.42e-195FFCP PHASE2:Hg19::chr2:179396370..179396375,-#_2c3d356be744605df720ea8200ea27d2p@chr2:179396370..179396375, -
5.42e-195FFCP PHASE1:Hg19::chr4:85166508..85166512,+#_2c3d356be744605df720ea8200ea27d2p@chr4:85166508..85166512, +
5.42e-195FFCP PHASE1:Hg19::chr7:128483294..128483304,+#_2c3d356be744605df720ea8200ea27d2p@chr7:128483294..128483304, +
5.42e-195FFCP PHASE2:Hg19::chr4:85166508..85166512,+#_2c3d356be744605df720ea8200ea27d2p@chr4:85166508..85166512, +
5.42e-195FFCP PHASE2:Hg19::chr11:3691037..3691040,+#_2c3d356be744605df720ea8200ea27d2p@chr11:3691037..3691040, +
5.42e-195FFCP PHASE2:Hg19::chr10:79759687..79759690,+#_2c3d356be744605df720ea8200ea27d2p@chr10:79759687..79759690, +
5.42e-195FFCP PHASE1:Hg19::chr10:97176812..97176813,+#_2c3d356be744605df720ea8200ea27d2p@chr10:97176812..97176813, +
5.42e-195FFCP PHASE1:Hg19::chr2:76859417..76859418,+#_2c3d356be744605df720ea8200ea27d2p@chr2:76859417..76859418, +
5.42e-195FFCP PHASE1:Hg19::chr11:3691037..3691040,+#_2c3d356be744605df720ea8200ea27d2p@chr11:3691037..3691040, +
5.42e-195FFCP PHASE1:Hg19::chr4:186423235..186423240,-#_2c3d356be744605df720ea8200ea27d2p@chr4:186423235..186423240, -
5.42e-195FFCP PHASE1:Hg19::chr22:25535147..25535150,+#_2c3d356be744605df720ea8200ea27d2p@chr22:25535147..25535150, +
9.37e-99FFCP PHASE1:Hg19::chr13:114067922..114067931,-#_a5e303876fa9e7339dfb590d856caf37p@chr13:114067922..114067931, -
9.37e-99FFCP PHASE1:Hg19::chr3:188070178..188070183,+#_a5e303876fa9e7339dfb590d856caf37p@chr3:188070178..188070183, +
9.37e-99FFCP PHASE2:Hg19::chr5:137206180..137206187,+#_a5e303876fa9e7339dfb590d856caf37p@chr5:137206180..137206187, +
9.37e-99FFCP PHASE1:Hg19::chr1:119487319..119487331,-#_a5e303876fa9e7339dfb590d856caf37p@chr1:119487319..119487331, -
9.37e-99FFCP PHASE2:Hg19::chr2:152534468..152534476,-#_a5e303876fa9e7339dfb590d856caf37p@chr2:152534468..152534476, -
9.37e-99FFCP PHASE1:Hg19::chr5:117747577..117747580,+#_a5e303876fa9e7339dfb590d856caf37p@chr5:117747577..117747580, +
9.37e-99FFCP PHASE1:Hg19::chr2:168106638..168106641,+#_a5e303876fa9e7339dfb590d856caf37p93@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr3:188070178..188070183,+#_a5e303876fa9e7339dfb590d856caf37p@chr3:188070178..188070183, +
9.37e-99FFCP PHASE2:Hg19::chr1:119487319..119487331,-#_a5e303876fa9e7339dfb590d856caf37p@chr1:119487319..119487331, -
9.37e-99FFCP PHASE1:Hg19::chr22:36000901..36000903,-#_a5e303876fa9e7339dfb590d856caf37p@chr22:36000901..36000903, -
9.37e-99FFCP PHASE1:Hg19::chr5:175125123..175125125,+#_a5e303876fa9e7339dfb590d856caf37p@chr5:175125123..175125125, +
9.37e-99FFCP PHASE1:Hg19::chr2:168102721..168102729,+#_a5e303876fa9e7339dfb590d856caf37p77@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr15:51060095..51060101,+#_a5e303876fa9e7339dfb590d856caf37p@chr15:51060095..51060101, +
9.37e-99FFCP PHASE1:Hg19::chr8:144542829..144542857,-#_a5e303876fa9e7339dfb590d856caf37p@chr8:144542829..144542857, -
9.37e-99FFCP PHASE2:Hg19::chr6:33716557..33716600,-#_a5e303876fa9e7339dfb590d856caf37p@chr6:33716557..33716600, -
9.37e-99FFCP PHASE2:Hg19::chr2:168102721..168102729,+#_a5e303876fa9e7339dfb590d856caf37p77@XIRP2
9.37e-99FFCP PHASE1:Hg19::chr2:168105362..168105368,+#_a5e303876fa9e7339dfb590d856caf37p46@XIRP2
9.37e-99FFCP PHASE1:Hg19::chr2:179399371..179399376,-#_a5e303876fa9e7339dfb590d856caf37p@chr2:179399371..179399376, -
9.37e-99FFCP PHASE2:Hg19::chr2:168106638..168106641,+#_a5e303876fa9e7339dfb590d856caf37p93@XIRP2
9.37e-99FFCP PHASE1:Hg19::chr5:172318159..172318160,+#_a5e303876fa9e7339dfb590d856caf37p@chr5:172318159..172318160, +
9.37e-99FFCP PHASE2:Hg19::chr5:117747577..117747580,+#_a5e303876fa9e7339dfb590d856caf37p@chr5:117747577..117747580, +
9.37e-99FFCP PHASE2:Hg19::chr2:168105362..168105368,+#_a5e303876fa9e7339dfb590d856caf37p46@XIRP2
9.37e-99FFCP PHASE1:Hg19::chr15:51060095..51060101,+#_a5e303876fa9e7339dfb590d856caf37p@chr15:51060095..51060101, +
9.37e-99FFCP PHASE2:Hg19::chr2:179399371..179399376,-#_a5e303876fa9e7339dfb590d856caf37p@chr2:179399371..179399376, -
9.37e-99FFCP PHASE1:Hg19::chr2:152525581..152525588,-#_a5e303876fa9e7339dfb590d856caf37p@chr2:152525581..152525588, -
9.37e-99FFCP PHASE2:Hg19::chr13:51335579..51335582,+#_a5e303876fa9e7339dfb590d856caf37p@chr13:51335579..51335582, +
9.37e-99FFCP PHASE2:Hg19::chr22:36000901..36000903,-#_a5e303876fa9e7339dfb590d856caf37p@chr22:36000901..36000903, -
9.37e-99FFCP PHASE2:Hg19::chr5:175125123..175125125,+#_a5e303876fa9e7339dfb590d856caf37p@chr5:175125123..175125125, +
9.37e-99FFCP PHASE2:Hg19::chr7:66800928..66800936,+#_a5e303876fa9e7339dfb590d856caf37p1@ENST00000430244, p1@uc003tvu.2
9.37e-99FFCP PHASE1:Hg19::chr2:168105987..168105994,+#_a5e303876fa9e7339dfb590d856caf37p54@XIRP2
9.37e-99FFCP PHASE1:Hg19::chr13:51335579..51335582,+#_a5e303876fa9e7339dfb590d856caf37p@chr13:51335579..51335582, +
9.37e-99FFCP PHASE1:Hg19::chr1:145478051..145478060,-#_a5e303876fa9e7339dfb590d856caf37p@chr1:145478051..145478060, -
9.37e-99FFCP PHASE1:Hg19::chr2:179514306..179514308,-#_a5e303876fa9e7339dfb590d856caf37p@chr2:179514306..179514308, -
9.37e-99FFCP PHASE1:Hg19::chr2:168104676..168104679,+#_a5e303876fa9e7339dfb590d856caf37p104@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr5:172318159..172318160,+#_a5e303876fa9e7339dfb590d856caf37p@chr5:172318159..172318160, +
9.37e-99FFCP PHASE2:Hg19::chr1:145478051..145478060,-#_a5e303876fa9e7339dfb590d856caf37p@chr1:145478051..145478060, -
9.37e-99FFCP PHASE1:Hg19::chr2:152499727..152499734,-#_a5e303876fa9e7339dfb590d856caf37p@chr2:152499727..152499734, -
9.37e-99FFCP PHASE2:Hg19::chr2:152525581..152525588,-#_a5e303876fa9e7339dfb590d856caf37p@chr2:152525581..152525588, -
9.37e-99FFCP PHASE1:Hg19::chr2:64069328..64069334,-#_a5e303876fa9e7339dfb590d856caf37p7@FLJ36848
9.37e-99FFCP PHASE2:Hg19::chr2:168104676..168104679,+#_a5e303876fa9e7339dfb590d856caf37p104@XIRP2
9.37e-99FFCP PHASE1:Hg19::chr6:33716557..33716600,-#_a5e303876fa9e7339dfb590d856caf37p@chr6:33716557..33716600, -
9.37e-99FFCP PHASE1:Hg19::chr2:152553958..152553964,-#_a5e303876fa9e7339dfb590d856caf37p@chr2:152553958..152553964, -
9.37e-99FFCP PHASE1:Hg19::chr7:66800928..66800936,+#_a5e303876fa9e7339dfb590d856caf37p1@ENST00000430244, p1@uc003tvu.2
9.37e-99FFCP PHASE1:Hg19::chr2:168104926..168104927,+#_a5e303876fa9e7339dfb590d856caf37p108@XIRP2
9.37e-99FFCP PHASE1:Hg19::chr2:152520248..152520253,-#_a5e303876fa9e7339dfb590d856caf37p@chr2:152520248..152520253, -
9.37e-99FFCP PHASE2:Hg19::chr2:64069328..64069334,-#_a5e303876fa9e7339dfb590d856caf37p7@FLJ36848
9.37e-99FFCP PHASE2:Hg19::chr2:168104926..168104927,+#_a5e303876fa9e7339dfb590d856caf37p108@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr2:168105987..168105994,+#_a5e303876fa9e7339dfb590d856caf37p54@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr2:179514306..179514308,-#_a5e303876fa9e7339dfb590d856caf37p@chr2:179514306..179514308, -
9.37e-99FFCP PHASE2:Hg19::chr13:114067922..114067931,-#_a5e303876fa9e7339dfb590d856caf37p@chr13:114067922..114067931, -
9.37e-99FFCP PHASE2:Hg19::chr2:152499727..152499734,-#_a5e303876fa9e7339dfb590d856caf37p@chr2:152499727..152499734, -
9.37e-99FFCP PHASE2:Hg19::chr2:152553958..152553964,-#_a5e303876fa9e7339dfb590d856caf37p@chr2:152553958..152553964, -
9.37e-99FFCP PHASE1:Hg19::chr5:137206180..137206187,+#_a5e303876fa9e7339dfb590d856caf37p@chr5:137206180..137206187, +
9.37e-99FFCP PHASE2:Hg19::chr2:152520248..152520253,-#_a5e303876fa9e7339dfb590d856caf37p@chr2:152520248..152520253, -
9.37e-99FFCP PHASE1:Hg19::chr2:152534468..152534476,-#_a5e303876fa9e7339dfb590d856caf37p@chr2:152534468..152534476, -
9.37e-99FFCP PHASE2:Hg19::chr8:144542829..144542857,-#_a5e303876fa9e7339dfb590d856caf37p@chr8:144542829..144542857, -
2.55e-98FFCP PHASE2:Hg19::chr12:122884464..122884467,-#_337ee65c85445ba6dd757b43b4dfc26ep38@CLIP1
2.55e-98FFCP PHASE1:Hg19::chr2:168102459..168102468,+#_337ee65c85445ba6dd757b43b4dfc26ep73@XIRP2
2.55e-98FFCP PHASE1:Hg19::chr22:26299595..26299605,+#_337ee65c85445ba6dd757b43b4dfc26ep@chr22:26299595..26299605, +
2.55e-98FFCP PHASE2:Hg19::chr2:168102459..168102468,+#_337ee65c85445ba6dd757b43b4dfc26ep73@XIRP2
2.55e-98FFCP PHASE1:Hg19::chr10:97037060..97037066,-#_337ee65c85445ba6dd757b43b4dfc26ep@chr10:97037060..97037066, -
2.55e-98FFCP PHASE1:Hg19::chr5:95180155..95180172,+#_337ee65c85445ba6dd757b43b4dfc26ep@chr5:95180155..95180172, +
2.55e-98FFCP PHASE2:Hg19::chr2:152566311..152566321,-#_337ee65c85445ba6dd757b43b4dfc26ep@chr2:152566311..152566321, -
2.55e-98FFCP PHASE2:Hg19::chr12:102079632..102079647,-#_337ee65c85445ba6dd757b43b4dfc26ep@chr12:102079632..102079647, -
2.55e-98FFCP PHASE1:Hg19::chr10:29918007..29918031,-#_337ee65c85445ba6dd757b43b4dfc26ep@chr10:29918007..29918031, -
2.55e-98FFCP PHASE1:Hg19::chr21:47769234..47769239,+#_337ee65c85445ba6dd757b43b4dfc26ep@chr21:47769234..47769239, +
2.55e-98FFCP PHASE2:Hg19::chr22:26299595..26299605,+#_337ee65c85445ba6dd757b43b4dfc26ep@chr22:26299595..26299605, +
2.55e-98FFCP PHASE1:Hg19::chr2:152590465..152590472,-#_337ee65c85445ba6dd757b43b4dfc26ep@chr2:152590465..152590472, -
2.55e-98FFCP PHASE2:Hg19::chr2:152590465..152590472,-#_337ee65c85445ba6dd757b43b4dfc26ep@chr2:152590465..152590472, -
2.55e-98FFCP PHASE2:Hg19::chr21:47769234..47769239,+#_337ee65c85445ba6dd757b43b4dfc26ep@chr21:47769234..47769239, +
2.55e-98FFCP PHASE1:Hg19::chr2:179656442..179656451,-#_337ee65c85445ba6dd757b43b4dfc26ep@chr2:179656442..179656451, -
2.55e-98FFCP PHASE1:Hg19::chr3:69168368..69168389,-#_337ee65c85445ba6dd757b43b4dfc26ep@chr3:69168368..69168389, -
2.55e-98FFCP PHASE1:Hg19::chr12:122884464..122884467,-#_337ee65c85445ba6dd757b43b4dfc26ep38@CLIP1
2.55e-98FFCP PHASE2:Hg19::chr2:179656442..179656451,-#_337ee65c85445ba6dd757b43b4dfc26ep@chr2:179656442..179656451, -
2.55e-98FFCP PHASE2:Hg19::chr6:125535391..125535409,+#_337ee65c85445ba6dd757b43b4dfc26ep@chr6:125535391..125535409, +
2.55e-98FFCP PHASE1:Hg19::chr3:35732964..35732965,+#_337ee65c85445ba6dd757b43b4dfc26ep@chr3:35732964..35732965, +
2.55e-98FFCP PHASE1:Hg19::chr12:69653866..69653876,+#_337ee65c85445ba6dd757b43b4dfc26ep@chr12:69653866..69653876, +
2.55e-98FFCP PHASE1:Hg19::chr2:29398214..29398229,+#_337ee65c85445ba6dd757b43b4dfc26ep27@CLIP4
2.55e-98FFCP PHASE2:Hg19::chr12:69653866..69653876,+#_337ee65c85445ba6dd757b43b4dfc26ep@chr12:69653866..69653876, +
2.55e-98FFCP PHASE2:Hg19::chr3:35732964..35732965,+#_337ee65c85445ba6dd757b43b4dfc26ep@chr3:35732964..35732965, +
2.55e-98FFCP PHASE2:Hg19::chr3:69168368..69168389,-#_337ee65c85445ba6dd757b43b4dfc26ep@chr3:69168368..69168389, -
2.55e-98FFCP PHASE1:Hg19::chr18:8608021..8608050,+#_337ee65c85445ba6dd757b43b4dfc26ep@chr18:8608021..8608050, +

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