UBERON:0007497: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 14: | Line 14: | ||
|obo_creation_date= | |obo_creation_date= | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
Revision as of 17:08, 26 June 2012
| Name: | developing epithelial placode | ||
|---|---|---|---|
| Definition: | "A domain of columnar epithelium in an embryo that represents the early stage of the development of the epithelial component of a new anatomical structure." [JB:DEF] | ||
| Xrefs: |
| ||
| Synonyms: | "epithelial placode" EXACT [AEO:0000112] | ||
| Alt_id: | EHDAA2:0003112 |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000485(simple columnar epithelium),UBERON:0001048(primordium) |
|---|
Children
| is a: | UBERON:0001049 (neural tube),UBERON:0003050 (olfactory placode),UBERON:0003051 (ear vesicle),UBERON:0003071 (eye primordium),UBERON:0003075 (neural plate),UBERON:0003894 (liver primordium),UBERON:0004209 (renal vesicle),UBERON:0005081 (ureter ureteric bud),UBERON:0010532 (primitive nephron) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007497 (developing epithelial placode), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:21648948..21648949,+#_bb89b382ec01bf7b8e5f3f2edd211187 | p@chr6:21648948..21648949, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr4:70707713..70707716,-#_bb89b382ec01bf7b8e5f3f2edd211187 | p@chr4:70707713..70707716, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:90366581..90366594,-#_bb89b382ec01bf7b8e5f3f2edd211187 | p@chr8:90366581..90366594, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:21648948..21648949,+#_bb89b382ec01bf7b8e5f3f2edd211187 | p@chr6:21648948..21648949, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr4:70707713..70707716,-#_bb89b382ec01bf7b8e5f3f2edd211187 | p@chr4:70707713..70707716, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:90366581..90366594,-#_bb89b382ec01bf7b8e5f3f2edd211187 | p@chr8:90366581..90366594, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:154459246..154459253,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr3:154459246..154459253, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42208023..42208043,-#_43170746cb22dd0005a9ffd1c223da97 | p4@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:120222470..120222516,+#_43170746cb22dd0005a9ffd1c223da97 | p2@Fscn2 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:63733478..63733491,-#_43170746cb22dd0005a9ffd1c223da97 | p1@Dytn |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:30710403..30710406,-#_43170746cb22dd0005a9ffd1c223da97 | p10@Otof |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:172843885..172843890,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr1:172843885..172843890, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr12:13508015..13508019,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr12:13508015..13508019, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:67011921..67011934,+#_43170746cb22dd0005a9ffd1c223da97 | p2@Gm1322 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:63099970..63099980,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr14:63099970..63099980, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:38104702..38104718,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr18:38104702..38104718, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42208023..42208043,-#_43170746cb22dd0005a9ffd1c223da97 | p4@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:154693281..154693317,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr3:154693281..154693317, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:128881546..128881553,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr2:128881546..128881553, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:109265277..109265288,-#_43170746cb22dd0005a9ffd1c223da97 | p4@Chrna10 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:59222033..59222043,+#_43170746cb22dd0005a9ffd1c223da97 | p7@A730017C20Rik |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:115556939..115556945,+#_43170746cb22dd0005a9ffd1c223da97 | p4@Kncn |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:47293487..47293493,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr14:47293487..47293493, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:80806020..80806031,-#_43170746cb22dd0005a9ffd1c223da97 | p3@Gipc3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:31335869..31335899,-#_43170746cb22dd0005a9ffd1c223da97 | p1@Tmprss3 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207697..42207705,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr9:42207697..42207705, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:27964761..27964768,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr7:27964761..27964768, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:86745686..86745727,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr6:86745686..86745727, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207697..42207705,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr9:42207697..42207705, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:56208792..56208814,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr9:56208792..56208814, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:58480061..58480066,+#_43170746cb22dd0005a9ffd1c223da97 | p5@Fer1l6 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:76964459..76964469,+#_43170746cb22dd0005a9ffd1c223da97 | p15@Mctp1 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:172843796..172843799,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr1:172843796..172843799, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:30710455..30710464,-#_43170746cb22dd0005a9ffd1c223da97 | p9@Otof |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:194818647..194818660,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr1:194818647..194818660, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:68423014..68423037,+#_43170746cb22dd0005a9ffd1c223da97 | p1@Grxcr1 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:108316802..108316807,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr10:108316802..108316807, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr18:81314626..81314636,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr18:81314626..81314636, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:50968647..50968668,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr9:50968647..50968668, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:151505798..151505818,-#_43170746cb22dd0005a9ffd1c223da97 | p21@Espn |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:103146966..103146971,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr15:103146966..103146971, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:3909290..3909299,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr5:3909290..3909299, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:55256373..55256384,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr19:55256373..55256384, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:107349309..107349318,-#_43170746cb22dd0005a9ffd1c223da97 | p4@Otogl |
| 1.87e-86 | FFCP PHASE2:Mm9::chr8:125802236..125802251,-#_43170746cb22dd0005a9ffd1c223da97 | p3@Fanca |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:3909310..3909321,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr5:3909310..3909321, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:182528371..182528385,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr1:182528371..182528385, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:13983102..13983126,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr17:13983102..13983126, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:113251614..113251623,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr6:113251614..113251623, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:13983102..13983126,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr17:13983102..13983126, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:92087926..92087938,+#_43170746cb22dd0005a9ffd1c223da97 | p2@Plscr5 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:58626291..58626298,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr3:58626291..58626298, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:10536797..10536802,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr19:10536797..10536802, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:56208792..56208814,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr9:56208792..56208814, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207887..42207960,-#_43170746cb22dd0005a9ffd1c223da97 | p1@Tecta |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:48087761..48087775,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr13:48087761..48087775, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:35012397..35012405,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr3:35012397..35012405, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:89215306..89215315,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr15:89215306..89215315, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr12:109905468..109905474,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr12:109905468..109905474, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:81327205..81327211,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr18:81327205..81327211, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:77084875..77084885,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr12:77084875..77084885, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr16:93971325..93971337,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr16:93971325..93971337, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:100724698..100724706,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr3:100724698..100724706, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:30619378..30619412,-#_43170746cb22dd0005a9ffd1c223da97 | p11@Tsga14 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207887..42207960,-#_43170746cb22dd0005a9ffd1c223da97 | p1@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:93235253..93235264,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr1:93235253..93235264, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:31335869..31335899,-#_43170746cb22dd0005a9ffd1c223da97 | p1@Tmprss3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:106986057..106986062,+#_43170746cb22dd0005a9ffd1c223da97 | p1@Kcna10 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:66860888..66860899,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr9:66860888..66860899, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr8:13435173..13435186,+#_43170746cb22dd0005a9ffd1c223da97 | p6@Fam70b |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:78322383..78322395,-#_43170746cb22dd0005a9ffd1c223da97 | p2@uc007rhb.1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:109052297..109052300,-#_43170746cb22dd0005a9ffd1c223da97 | p2@Tomt |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:8405038..8405048,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr11:8405038..8405048, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:35012425..35012439,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr3:35012425..35012439, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:115556989..115556997,+#_43170746cb22dd0005a9ffd1c223da97 | p1@Kncn |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42206745..42206774,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr9:42206745..42206774, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:10536797..10536802,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr19:10536797..10536802, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42206745..42206774,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr9:42206745..42206774, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:55255206..55255223,+#_43170746cb22dd0005a9ffd1c223da97 | p1@Tectb |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:78257491..78257498,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr13:78257491..78257498, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chrX:154140800..154140810,+#_43170746cb22dd0005a9ffd1c223da97 | p@chrX:154140800..154140810, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:128881546..128881553,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr2:128881546..128881553, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chrX:154140800..154140810,+#_43170746cb22dd0005a9ffd1c223da97 | p@chrX:154140800..154140810, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:81012915..81012923,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr3:81012915..81012923, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:43454162..43454170,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr1:43454162..43454170, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:107349418..107349423,-#_43170746cb22dd0005a9ffd1c223da97 | p5@Otogl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:68423014..68423037,+#_43170746cb22dd0005a9ffd1c223da97 | p1@Grxcr1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr18:66033526..66033539,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr18:66033526..66033539, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr12:77084875..77084885,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr12:77084875..77084885, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:93218694..93218705,+#_43170746cb22dd0005a9ffd1c223da97 | p1@Espnl |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:47293487..47293493,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr14:47293487..47293493, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:42158627..42158630,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr18:42158627..42158630, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:37195838..37195870,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr13:37195838..37195870, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:154693281..154693317,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr3:154693281..154693317, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42208142..42208157,-#_43170746cb22dd0005a9ffd1c223da97 | p10@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:58626291..58626298,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr3:58626291..58626298, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:102297728..102297742,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr14:102297728..102297742, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:88068153..88068160,-#_43170746cb22dd0005a9ffd1c223da97 | p10@Sec11a |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:133957514..133957529,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr7:133957514..133957529, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:30710416..30710440,-#_43170746cb22dd0005a9ffd1c223da97 | p2@Otof |
