CL:0002594: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 14: | Line 14: | ||
|obo_creation_date=2011-03-06T05:01:48Z | |obo_creation_date=2011-03-06T05:01:48Z | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 17:28, 26 June 2012
| Name: | smooth muscle cell of the umbilical artery |
|---|---|
| Namespace: | cell |
| Definition: | "A smooth muscle cell of the umbilical artery." [GOC:tfm] |
| Created by: | tmeehan |
| Creation date: | 2011-03-06T05:01:48Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000359(vascular associated smooth muscle cell) |
|---|
Children
| is a: | FF:11290-117A3 (Smooth Muscle Cells - Umbilical Artery, donor1) |
|---|---|
| derives from: | FF:0000176 (human smooth muscle cell of umbilical artery sample) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11212-116A6 (Smooth Muscle Cells - Umbilical artery, donor0)
- 11290-117A3 (Smooth Muscle Cells - Umbilical Artery, donor1)
- 11367-117I8 (Smooth Muscle Cells - Umbilical Artery, donor2)
- 11439-118H8 (Smooth Muscle Cells - Umbilical Artery, donor3)
Mouse (Mus musculus)
- 11212-116A6 (Smooth Muscle Cells - Umbilical artery, donor0)
- 11290-117A3 (Smooth Muscle Cells - Umbilical Artery, donor1)
- 11367-117I8 (Smooth Muscle Cells - Umbilical Artery, donor2)
- 11439-118H8 (Smooth Muscle Cells - Umbilical Artery, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002594 (smooth muscle cell of the umbilical artery), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.58e-74 | FFCP PHASE2:Hg19::chr13:28896641..28896653,-#_05742ea961a21de1a28824c290fc2ed4 | p5@FLT1 |
| 2.58e-74 | FFCP PHASE1:Hg19::chr13:28896641..28896653,-#_05742ea961a21de1a28824c290fc2ed4 | p5@FLT1 |
| 7.04e-74 | FFCP PHASE2:Hg19::chr3:42515138..42515150,-#_65a79dd3dc647b23f3d54bb3827b21c5 | p@chr3:42515138..42515150, - |
| 7.04e-74 | FFCP PHASE1:Hg19::chr3:42515138..42515150,-#_65a79dd3dc647b23f3d54bb3827b21c5 | p@chr3:42515138..42515150, - |
| 4.67e-66 | FFCP PHASE1:Hg19::chr11:116728907..116728948,+#_a47d77b53eac139d014396e87d967641 | p2@CU690121 |
| 4.67e-66 | FFCP PHASE2:Hg19::chr11:116728907..116728948,+#_a47d77b53eac139d014396e87d967641 | p2@CU690121 |
| 4.69e-54 | FFCP PHASE2:Hg19::chr13:28903811..28903815,-#_60112e1ce1baec8eb797ad0a17bfd234 | p3@FLT1 |
| 4.69e-54 | FFCP PHASE1:Hg19::chr13:28903811..28903815,-#_60112e1ce1baec8eb797ad0a17bfd234 | p3@FLT1 |
| 1.47e-44 | FFCP PHASE2:Hg19::chr1:243433014..243433053,+#_62ffed4f54f5c975fa1cd63441733399 | p@chr1:243433014..243433053, + |
| 1.47e-44 | FFCP PHASE1:Hg19::chr1:243433014..243433053,+#_62ffed4f54f5c975fa1cd63441733399 | p@chr1:243433014..243433053, + |
| 1.31e-40 | FFCP PHASE2:Hg19::chr8:90556171..90556173,+#_af951a6c7567557ad7d2d09abd502261 | p@chr8:90556171..90556173, + |
| 1.31e-40 | FFCP PHASE1:Hg19::chr8:90556171..90556173,+#_af951a6c7567557ad7d2d09abd502261 | p@chr8:90556171..90556173, + |
| 3.31e-40 | FFCP PHASE2:Hg19::chr1:225516893..225516902,-#_4f109465d186c1df95bcae823165cd0d | p@chr1:225516893..225516902, - |
| 3.31e-40 | FFCP PHASE1:Hg19::chr1:225516893..225516902,-#_4f109465d186c1df95bcae823165cd0d | p@chr1:225516893..225516902, - |
| 4.05e-40 | FFCP PHASE2:Hg19::chr12:65928345..65928348,-#_b0ba0904d3b29dbe48eb3c1afd2fec83 | p@chr12:65928345..65928348, - |
| 4.05e-40 | FFCP PHASE1:Hg19::chr12:65928345..65928348,-#_b0ba0904d3b29dbe48eb3c1afd2fec83 | p@chr12:65928345..65928348, - |
| 7.56e-35 | FFCP PHASE2:Hg19::chr10:90713570..90713574,+#_937bb194106d76dd64b1ea1a27daff3e | p@chr10:90713570..90713574, + |
| 7.56e-35 | FFCP PHASE1:Hg19::chr10:90713570..90713574,+#_937bb194106d76dd64b1ea1a27daff3e | p@chr10:90713570..90713574, + |
| 7.52e-34 | FFCP PHASE2:Hg19::chr16:86965053..86965066,-#_46640a30e98d5f5dd0c69bb1ddeb1a3d | p@chr16:86965053..86965066, - |
| 7.52e-34 | FFCP PHASE1:Hg19::chr16:86965053..86965066,-#_46640a30e98d5f5dd0c69bb1ddeb1a3d | p@chr16:86965053..86965066, - |
| 1.17e-33 | FFCP PHASE1:Hg19::chr1:219514172..219514177,-#_42cf815c6c0dff2ed452b7d17e6a0078 | p@chr1:219514172..219514177, - |
| 1.17e-33 | FFCP PHASE2:Hg19::chr1:219514172..219514177,-#_42cf815c6c0dff2ed452b7d17e6a0078 | p@chr1:219514172..219514177, - |
| 1.63e-33 | FFCP PHASE2:Hg19::chr4:48082192..48082207,-#_23c6e6518e40f8392dc92104799f5f08 | p3@TXK |
| 1.63e-33 | FFCP PHASE1:Hg19::chr4:48082192..48082207,-#_23c6e6518e40f8392dc92104799f5f08 | p3@TXK |
| 6.32e-31 | FFCP PHASE2:Hg19::chr10:93373465..93373477,-#_2672ec402eb6b1b1436bd8eaf19a2657 | p@chr10:93373465..93373477, - |
| 6.32e-31 | FFCP PHASE1:Hg19::chr10:93373465..93373477,-#_2672ec402eb6b1b1436bd8eaf19a2657 | p@chr10:93373465..93373477, - |
| 2.17e-29 | FFCP PHASE2:Hg19::chr2:133429091..133429104,-#_694c70d45523f5799676b5a7b990fb49 | p5@LYPD1 |
| 2.17e-29 | FFCP PHASE1:Hg19::chr2:133429091..133429104,-#_694c70d45523f5799676b5a7b990fb49 | p5@LYPD1 |
| 4.21e-29 | FFCP PHASE2:Hg19::chr12:66026167..66026180,+#_784f572d91c7f16a7df4a92175eb3c8d | p@chr12:66026167..66026180, + |
| 4.21e-29 | FFCP PHASE1:Hg19::chr12:66026167..66026180,+#_784f572d91c7f16a7df4a92175eb3c8d | p@chr12:66026167..66026180, + |
| 4.91e-28 | FFCP PHASE2:Hg19::chr12:54362447..54362462,-#_fc338cf73469fb6fa1052d846026a135 | p1@HOTAIR |
| 4.91e-28 | FFCP PHASE1:Hg19::chr12:54362447..54362462,-#_fc338cf73469fb6fa1052d846026a135 | p1@HOTAIR |
| 6.75e-28 | FFCP PHASE1:Hg19::chr3:190953512..190953525,-#_23ae8a7a703c892d51cbbdc94130fda3 | p@chr3:190953512..190953525, - |
| 6.75e-28 | FFCP PHASE2:Hg19::chr3:190953512..190953525,-#_23ae8a7a703c892d51cbbdc94130fda3 | p@chr3:190953512..190953525, - |
| 2.89e-27 | FFCP PHASE2:Hg19::chr3:111480425..111480456,+#_30a493f908a5f0f09c24a420ed2b7329 | p@chr3:111480425..111480456, + |
| 2.89e-27 | FFCP PHASE1:Hg19::chr3:111480425..111480456,+#_30a493f908a5f0f09c24a420ed2b7329 | p@chr3:111480425..111480456, + |
| 7.14e-26 | FFCP PHASE1:Hg19::chr5:95053358..95053363,+#_cd016ea7264a5d1be2bd6735bd705a76 | p39@RHOBTB3 |
| 7.14e-26 | FFCP PHASE2:Hg19::chr16:77835332..77835343,-#_cd016ea7264a5d1be2bd6735bd705a76 | p@chr16:77835332..77835343, - |
| 7.14e-26 | FFCP PHASE1:Hg19::chr16:77835332..77835343,-#_cd016ea7264a5d1be2bd6735bd705a76 | p@chr16:77835332..77835343, - |
| 7.14e-26 | FFCP PHASE2:Hg19::chr5:95053358..95053363,+#_cd016ea7264a5d1be2bd6735bd705a76 | p39@RHOBTB3 |
| 1.1e-25 | FFCP PHASE1:Hg19::chr2:17603323..17603339,-#_72ad2b590700f68f6d151d2773156ba6 | p@chr2:17603323..17603339, - |
| 1.1e-25 | FFCP PHASE2:Hg19::chr2:17603323..17603339,-#_72ad2b590700f68f6d151d2773156ba6 | p@chr2:17603323..17603339, - |
| 1.11e-25 | FFCP PHASE2:Hg19::chr5:142023708..142023717,-#_dbb39320f4be39005729211f7598f165 | p12@FGF1 |
| 1.11e-25 | FFCP PHASE1:Hg19::chr5:142023708..142023717,-#_dbb39320f4be39005729211f7598f165 | p12@FGF1 |
| 1.26e-25 | FFCP PHASE2:Hg19::chr11:116728814..116728821,-#_a1ba973a47371510fb4cd0961902f9f9 | p@chr11:116728814..116728821, - |
| 1.26e-25 | FFCP PHASE1:Hg19::chr11:116728814..116728821,-#_a1ba973a47371510fb4cd0961902f9f9 | p@chr11:116728814..116728821, - |
| 1.84e-25 | FFCP PHASE1:Hg19::chr2:72742814..72742824,-#_73a92d89fc8a4f2fff66bb04320ea6e7 | p10@EXOC6B |
| 1.84e-25 | FFCP PHASE2:Hg19::chr2:72742814..72742824,-#_73a92d89fc8a4f2fff66bb04320ea6e7 | p10@EXOC6B |
| 2.34e-25 | FFCP PHASE2:Hg19::chr3:141089144..141089148,-#_ca2cf1b6dba1e4141103f91b0a62f98e | p@chr3:141089144..141089148, - |
| 2.34e-25 | FFCP PHASE1:Hg19::chr3:141089144..141089148,-#_ca2cf1b6dba1e4141103f91b0a62f98e | p@chr3:141089144..141089148, - |
| 2.54e-25 | FFCP PHASE1:Hg19::chr5:95053322..95053347,+#_15eb79b9e98ed9d0194ca4d4701433eb | p14@RHOBTB3 |
| 2.54e-25 | FFCP PHASE2:Hg19::chr5:95053322..95053347,+#_15eb79b9e98ed9d0194ca4d4701433eb | p14@RHOBTB3 |
| 1.38e-23 | FFCP PHASE2:Hg19::chr12:54359771..54359813,+#_bfa029b30abd53829964513efffd17f8 | p@chr12:54359771..54359813, + |
| 1.38e-23 | FFCP PHASE1:Hg19::chr12:54359771..54359813,+#_bfa029b30abd53829964513efffd17f8 | p@chr12:54359771..54359813, + |
| 6.62e-22 | FFCP PHASE2:Hg19::chr2:134548872..134548879,-#_4df78a9ddca323237ede5ad153fb4af0 | p@chr2:134548872..134548879, - |
| 6.62e-22 | FFCP PHASE1:Hg19::chr2:134548872..134548879,-#_4df78a9ddca323237ede5ad153fb4af0 | p@chr2:134548872..134548879, - |
| 1.49e-21 | FFCP PHASE2:Hg19::chr16:30081719..30081734,-#_390a1e7979045b856d228813ba6ff7c1 | p4@CU680643 |
| 1.49e-21 | FFCP PHASE1:Hg19::chr16:30081719..30081734,-#_390a1e7979045b856d228813ba6ff7c1 | p4@CU680643 |
| 2.06e-21 | FFCP PHASE2:Hg19::chr18:8747536..8747542,-#_b4be5568be10e64e7addc47f764bb3d7 | p@chr18:8747536..8747542, - |
| 2.06e-21 | FFCP PHASE1:Hg19::chr18:8747536..8747542,-#_b4be5568be10e64e7addc47f764bb3d7 | p@chr18:8747536..8747542, - |
| 4.62e-21 | FFCP PHASE2:Hg19::chr16:31483266..31483280,-#_a6ccb375dee264939562119338cb7700 | p2@BC041840 |
| 4.62e-21 | FFCP PHASE1:Hg19::chr16:31483266..31483280,-#_a6ccb375dee264939562119338cb7700 | p2@BC041840 |
| 6.33e-21 | FFCP PHASE2:Hg19::chr17:46136725..46136736,+#_1fde7042788b87b813f78a5d2eb33fee | p@chr17:46136725..46136736, + |
| 6.33e-21 | FFCP PHASE1:Hg19::chr17:46136725..46136736,+#_1fde7042788b87b813f78a5d2eb33fee | p@chr17:46136725..46136736, + |
| 8.54e-21 | FFCP PHASE1:Hg19::chrX:13390461..13390482,+#_2b7802259a42a34d16d8797c1b250ef2 | p@chrX:13390461..13390482, + |
| 8.54e-21 | FFCP PHASE2:Hg19::chrX:13390461..13390482,+#_2b7802259a42a34d16d8797c1b250ef2 | p@chrX:13390461..13390482, + |
| 9.78e-21 | FFCP PHASE1:Hg19::chr3:45245731..45245737,-#_3de50a41b63b00a2571974a16d8f9585 | p@chr3:45245731..45245737, - |
| 9.78e-21 | FFCP PHASE2:Hg19::chr3:45245731..45245737,-#_3de50a41b63b00a2571974a16d8f9585 | p@chr3:45245731..45245737, - |
| 1.28e-20 | FFCP PHASE1:Hg19::chr3:106464246..106464276,-#_75d1d4395b250237ec6d9802eb53e417 | p@chr3:106464246..106464276, - |
| 1.28e-20 | FFCP PHASE2:Hg19::chr3:106464246..106464276,-#_75d1d4395b250237ec6d9802eb53e417 | p@chr3:106464246..106464276, - |
| 1.56e-20 | FFCP PHASE2:Hg19::chr2:72742849..72742865,-#_c20b537b1f7410503f027ebe39d89ecd | p9@EXOC6B |
| 1.56e-20 | FFCP PHASE1:Hg19::chr2:72742849..72742865,-#_c20b537b1f7410503f027ebe39d89ecd | p9@EXOC6B |
| 3.56e-20 | FFCP PHASE2:Hg19::chr2:74136186..74136244,+#_7e2dd81b58d53a5b2749f057d2f96f15 | p@chr2:74136186..74136244, + |
| 3.56e-20 | FFCP PHASE1:Hg19::chr2:74136186..74136244,+#_7e2dd81b58d53a5b2749f057d2f96f15 | p@chr2:74136186..74136244, + |
| 1.38e-19 | FFCP PHASE2:Hg19::chr11:102661008..102661029,-#_678bd42fbfc6fa9086be82c14faca91b | p@chr11:102661008..102661029, - |
| 1.38e-19 | FFCP PHASE1:Hg19::chr11:102661008..102661029,-#_678bd42fbfc6fa9086be82c14faca91b | p@chr11:102661008..102661029, - |
| 3.13e-19 | FFCP PHASE2:Hg19::chr18:20140144..20140184,+#_66cde01dd0f45961551783c81a0fe639 | p@chr18:20140144..20140184, + |
| 3.13e-19 | FFCP PHASE1:Hg19::chr18:20140144..20140184,+#_66cde01dd0f45961551783c81a0fe639 | p@chr18:20140144..20140184, + |
| 3.95e-19 | FFCP PHASE1:Hg19::chr11:102661517..102661541,-#_467e132472693fcaf24ea11fac2edde2 | p@chr11:102661517..102661541, - |
| 3.95e-19 | FFCP PHASE2:Hg19::chr11:102661517..102661541,-#_467e132472693fcaf24ea11fac2edde2 | p@chr11:102661517..102661541, - |
| 5.16e-19 | FFCP PHASE1:Hg19::chr8:22418409..22418450,+#_f38c6dc3618cb9d680cdb2ce74587fb4 | p42@SORBS3 |
| 5.16e-19 | FFCP PHASE2:Hg19::chr8:22418409..22418450,+#_f38c6dc3618cb9d680cdb2ce74587fb4 | p42@SORBS3 |
| 5.88e-19 | FFCP PHASE2:Hg19::chr2:74129552..74129589,-#_6bc559cee3520fc07217f1fe0cd8e248 | p@chr2:74129552..74129589, - |
| 5.88e-19 | FFCP PHASE1:Hg19::chr2:74129552..74129589,-#_6bc559cee3520fc07217f1fe0cd8e248 | p@chr2:74129552..74129589, - |
| 6.33e-19 | FFCP PHASE2:Hg19::chr2:133429062..133429090,-#_e339cbfdc81af7ae364379c6c2550125 | p2@LYPD1 |
| 6.33e-19 | FFCP PHASE1:Hg19::chr2:133429062..133429090,-#_e339cbfdc81af7ae364379c6c2550125 | p2@LYPD1 |
| 6.77e-19 | FFCP PHASE2:Hg19::chr2:216720351..216720357,+#_6c742794f204af99cda493b9ab22365c | p@chr2:216720351..216720357, + |
| 6.77e-19 | FFCP PHASE1:Hg19::chr2:216720351..216720357,+#_6c742794f204af99cda493b9ab22365c | p@chr2:216720351..216720357, + |
| 1.16e-18 | FFCP PHASE1:Hg19::chr6:121843766..121843798,+#_c244cbe1c90e49a2ce54f3daf5976df3 | p@chr6:121843766..121843798, + |
| 1.16e-18 | FFCP PHASE2:Hg19::chr14:38679569..38679581,+#_c244cbe1c90e49a2ce54f3daf5976df3 | p@chr14:38679569..38679581, + |
| 1.16e-18 | FFCP PHASE1:Hg19::chr14:38679569..38679581,+#_c244cbe1c90e49a2ce54f3daf5976df3 | p@chr14:38679569..38679581, + |
| 1.16e-18 | FFCP PHASE2:Hg19::chr6:121843766..121843798,+#_c244cbe1c90e49a2ce54f3daf5976df3 | p@chr6:121843766..121843798, + |
| 2.32e-18 | FFCP PHASE2:Hg19::chr7:41956273..41956284,-#_e377a196f5650ee6121df69e8f9ae340 | p@chr7:41956273..41956284, - |
| 2.32e-18 | FFCP PHASE1:Hg19::chr7:41956273..41956284,-#_e377a196f5650ee6121df69e8f9ae340 | p@chr7:41956273..41956284, - |
| 3.53e-18 | FFCP PHASE2:Hg19::chr4:7846380..7846392,-#_db333ede656f76084953a1b71ad71c8b | p@chr4:7846380..7846392, - |
| 3.53e-18 | FFCP PHASE1:Hg19::chr4:7846380..7846392,-#_db333ede656f76084953a1b71ad71c8b | p@chr4:7846380..7846392, - |
| 4.75e-18 | FFCP PHASE2:Hg19::chr2:74146666..74146687,+#_05e694e68c6df85a444cd213dbd9aae1 | p@chr2:74146666..74146687, + |
| 4.75e-18 | FFCP PHASE1:Hg19::chr2:74146666..74146687,+#_05e694e68c6df85a444cd213dbd9aae1 | p@chr2:74146666..74146687, + |
| 7.43e-18 | FFCP PHASE1:Hg19::chr17:40672344..40672359,+#_f6bd22de7535d11d7af58b75f1d963c1 | p4@ATP6V0A1 |
| 7.43e-18 | FFCP PHASE2:Hg19::chr17:40672344..40672359,+#_f6bd22de7535d11d7af58b75f1d963c1 | p4@ATP6V0A1 |
