CL:0002537: Difference between revisions
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|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | ||
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Revision as of 13:04, 27 June 2012
| Name: | amnion mesenchymal stem cell |
|---|---|
| Namespace: | cell |
| Definition: | "A mesenchymal stem cell of the amnion membrane." [GOC:tfm, PMID:20446274, PMID:21339039] |
| Synonyms: | "amniotic membrane stem cell" EXACT [] |
| Created by: | tmeehan |
| Creation date: | 2011-02-28T12:44:24Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000134(mesenchymal cell),CL:0000349(extraembryonic cell) |
|---|---|
| part_of: | UBERON:0000305(amnion) |
Children
| derives from: | FF:0000092 (human amniotic membrane cell sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11547-120B8 (Mesenchymal Stem Cells - amniotic membrane, donor1)
- 11627-122B7 (Mesenchymal Stem Cells - amniotic membrane, donor2)
- 12235-129G3 (amniotic membrane cells, donor1)
- 12236-129G4 (amniotic membrane cells, donor2)
- 12237-129G5 (amniotic membrane cells, donor3)
Mouse (Mus musculus)
- 11547-120B8 (Mesenchymal Stem Cells - amniotic membrane, donor1)
- 11627-122B7 (Mesenchymal Stem Cells - amniotic membrane, donor2)
- 12235-129G3 (amniotic membrane cells, donor1)
- 12236-129G4 (amniotic membrane cells, donor2)
- 12237-129G5 (amniotic membrane cells, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002537 (amnion mesenchymal stem cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.21e-88 | FFCP PHASE2:Hg19::chr7:114542043..114542046,-#_d9b76d5547a0487fdec80ff0f05ccb99 | p@chr7:114542043..114542046, - |
| 1.21e-88 | FFCP PHASE1:Hg19::chr7:114542043..114542046,-#_d9b76d5547a0487fdec80ff0f05ccb99 | p@chr7:114542043..114542046, - |
| 3.49e-79 | FFCP PHASE2:Hg19::chr17:38859653..38859658,-#_e3ea09bccb9c579cdb5b0a57d9b04d74 | p10@KRT24 |
| 3.49e-79 | FFCP PHASE1:Hg19::chr7:7310907..7310916,+#_e3ea09bccb9c579cdb5b0a57d9b04d74 | p4@ENST00000447039 |
| 3.49e-79 | FFCP PHASE2:Hg19::chr17:38858136..38858142,-#_e3ea09bccb9c579cdb5b0a57d9b04d74 | p@chr17:38858136..38858142, - |
| 3.49e-79 | FFCP PHASE2:Hg19::chr5:59573885..59573903,-#_e3ea09bccb9c579cdb5b0a57d9b04d74 | p@chr5:59573885..59573903, - |
| 3.49e-79 | FFCP PHASE2:Hg19::chr16:84889089..84889095,-#_e3ea09bccb9c579cdb5b0a57d9b04d74 | p@chr16:84889089..84889095, - |
| 3.49e-79 | FFCP PHASE2:Hg19::chr17:38859399..38859408,-#_e3ea09bccb9c579cdb5b0a57d9b04d74 | p@chr17:38859399..38859408, - |
| 3.49e-79 | FFCP PHASE1:Hg19::chrX:21444376..21444380,+#_e3ea09bccb9c579cdb5b0a57d9b04d74 | p@chrX:21444376..21444380, + |
| 3.49e-79 | FFCP PHASE2:Hg19::chr7:7310907..7310916,+#_e3ea09bccb9c579cdb5b0a57d9b04d74 | p4@ENST00000447039 |
| 3.49e-79 | FFCP PHASE1:Hg19::chr17:38859653..38859658,-#_e3ea09bccb9c579cdb5b0a57d9b04d74 | p10@KRT24 |
| 3.49e-79 | FFCP PHASE1:Hg19::chr17:38858136..38858142,-#_e3ea09bccb9c579cdb5b0a57d9b04d74 | p@chr17:38858136..38858142, - |
| 3.49e-79 | FFCP PHASE1:Hg19::chr16:84889089..84889095,-#_e3ea09bccb9c579cdb5b0a57d9b04d74 | p@chr16:84889089..84889095, - |
| 3.49e-79 | FFCP PHASE1:Hg19::chr17:38859399..38859408,-#_e3ea09bccb9c579cdb5b0a57d9b04d74 | p@chr17:38859399..38859408, - |
| 3.49e-79 | FFCP PHASE2:Hg19::chrX:21444376..21444380,+#_e3ea09bccb9c579cdb5b0a57d9b04d74 | p@chrX:21444376..21444380, + |
| 3.49e-79 | FFCP PHASE1:Hg19::chr5:59573885..59573903,-#_e3ea09bccb9c579cdb5b0a57d9b04d74 | p@chr5:59573885..59573903, - |
| 1.56e-71 | FFCP PHASE1:Hg19::chr6:31084453..31084463,-#_6751421d279f58cd8cecdea66c161ab2 | p@chr6:31084453..31084463, - |
| 1.56e-71 | FFCP PHASE2:Hg19::chr6:31084453..31084463,-#_6751421d279f58cd8cecdea66c161ab2 | p@chr6:31084453..31084463, - |
| 1.98e-71 | FFCP PHASE1:Hg19::chr19:36594000..36594048,+#_df0bd2e3199438c7080a5cecc744f13a | p1@BC128417 |
| 1.98e-71 | FFCP PHASE2:Hg19::chr19:36594000..36594048,+#_df0bd2e3199438c7080a5cecc744f13a | p1@BC128417 |
| 6.03e-60 | FFCP PHASE2:Hg19::chr6:31085053..31085062,-#_f6ba42cc182eff2cf6dc105463968de4 | p@chr6:31085053..31085062, - |
| 6.03e-60 | FFCP PHASE2:Hg19::chr11:1973029..1973054,+#_f6ba42cc182eff2cf6dc105463968de4 | p@chr11:1973029..1973054, + |
| 6.03e-60 | FFCP PHASE2:Hg19::chr12:8975061..8975072,+#_f6ba42cc182eff2cf6dc105463968de4 | p5@A2ML1 |
| 6.03e-60 | FFCP PHASE1:Hg19::chr12:8975061..8975072,+#_f6ba42cc182eff2cf6dc105463968de4 | p5@A2ML1 |
| 6.03e-60 | FFCP PHASE1:Hg19::chr11:1973029..1973054,+#_f6ba42cc182eff2cf6dc105463968de4 | p@chr11:1973029..1973054, + |
| 6.03e-60 | FFCP PHASE1:Hg19::chr6:31085053..31085062,-#_f6ba42cc182eff2cf6dc105463968de4 | p@chr6:31085053..31085062, - |
| 7.37e-60 | FFCP PHASE1:Hg19::chr7:14880892..14880938,-#_3aa20115e08ad6aea9a32d436796254b | p16@DGKB |
| 7.37e-60 | FFCP PHASE1:Hg19::chr11:1949070..1949079,+#_3aa20115e08ad6aea9a32d436796254b | p@chr11:1949070..1949079, + |
| 7.37e-60 | FFCP PHASE2:Hg19::chr11:1949070..1949079,+#_3aa20115e08ad6aea9a32d436796254b | p@chr11:1949070..1949079, + |
| 7.37e-60 | FFCP PHASE2:Hg19::chr7:14880892..14880938,-#_3aa20115e08ad6aea9a32d436796254b | p16@DGKB |
| 9.01e-60 | FFCP PHASE2:Hg19::chr6:31083839..31083849,-#_5ef949e44fc14991494baad113892d54 | p@chr6:31083839..31083849, - |
| 9.01e-60 | FFCP PHASE1:Hg19::chr6:31084485..31084501,-#_5ef949e44fc14991494baad113892d54 | p@chr6:31084485..31084501, - |
| 9.01e-60 | FFCP PHASE2:Hg19::chr6:31084485..31084501,-#_5ef949e44fc14991494baad113892d54 | p@chr6:31084485..31084501, - |
| 9.01e-60 | FFCP PHASE1:Hg19::chr6:31083839..31083849,-#_5ef949e44fc14991494baad113892d54 | p@chr6:31083839..31083849, - |
| 2.01e-59 | FFCP PHASE2:Hg19::chr8:24049607..24049611,+#_09bb45a45ad7878c079e6f4a62333a77 | p@chr8:24049607..24049611, + |
| 2.01e-59 | FFCP PHASE1:Hg19::chr8:24049607..24049611,+#_09bb45a45ad7878c079e6f4a62333a77 | p@chr8:24049607..24049611, + |
| 2.46e-59 | FFCP PHASE1:Hg19::chr10:88734366..88734378,-#_36234c634e8c6c8ee021f17bb9d3d892 | p@chr10:88734366..88734378, - |
| 2.46e-59 | FFCP PHASE2:Hg19::chr10:88734366..88734378,-#_36234c634e8c6c8ee021f17bb9d3d892 | p@chr10:88734366..88734378, - |
| 2.19e-53 | FFCP PHASE2:Hg19::chr19:15065060..15065084,-#_f9ecb6b258594e3ebe22af717ca7a7a2 | p@chr19:15065060..15065084, - |
| 2.19e-53 | FFCP PHASE1:Hg19::chr17:38859418..38859423,-#_f9ecb6b258594e3ebe22af717ca7a7a2 | p@chr17:38859418..38859423, - |
| 2.19e-53 | FFCP PHASE1:Hg19::chr2:231988425..231988433,-#_f9ecb6b258594e3ebe22af717ca7a7a2 | p11@HTR2B |
| 2.19e-53 | FFCP PHASE1:Hg19::chr16:812453..812461,+#_f9ecb6b258594e3ebe22af717ca7a7a2 | p20@MSLN |
| 2.19e-53 | FFCP PHASE2:Hg19::chr17:38859468..38859474,-#_f9ecb6b258594e3ebe22af717ca7a7a2 | p@chr17:38859468..38859474, - |
| 2.19e-53 | FFCP PHASE2:Hg19::chr12:108238355..108238361,+#_f9ecb6b258594e3ebe22af717ca7a7a2 | p@chr12:108238355..108238361, + |
| 2.19e-53 | FFCP PHASE2:Hg19::chr13:68765236..68765243,+#_f9ecb6b258594e3ebe22af717ca7a7a2 | p@chr13:68765236..68765243, + |
| 2.19e-53 | FFCP PHASE2:Hg19::chr13:41935939..41935949,+#_f9ecb6b258594e3ebe22af717ca7a7a2 | p9@NAA16 |
| 2.19e-53 | FFCP PHASE1:Hg19::chr13:68765236..68765243,+#_f9ecb6b258594e3ebe22af717ca7a7a2 | p@chr13:68765236..68765243, + |
| 2.19e-53 | FFCP PHASE1:Hg19::chr13:41935939..41935949,+#_f9ecb6b258594e3ebe22af717ca7a7a2 | p9@NAA16 |
| 2.19e-53 | FFCP PHASE2:Hg19::chr2:231988425..231988433,-#_f9ecb6b258594e3ebe22af717ca7a7a2 | p11@HTR2B |
| 2.19e-53 | FFCP PHASE1:Hg19::chr9:92049035..92049042,+#_f9ecb6b258594e3ebe22af717ca7a7a2 | p@chr9:92049035..92049042, + |
| 2.19e-53 | FFCP PHASE1:Hg19::chr17:38859468..38859474,-#_f9ecb6b258594e3ebe22af717ca7a7a2 | p@chr17:38859468..38859474, - |
| 2.19e-53 | FFCP PHASE1:Hg19::chr19:15065060..15065084,-#_f9ecb6b258594e3ebe22af717ca7a7a2 | p@chr19:15065060..15065084, - |
| 2.19e-53 | FFCP PHASE2:Hg19::chr17:38859418..38859423,-#_f9ecb6b258594e3ebe22af717ca7a7a2 | p@chr17:38859418..38859423, - |
| 2.19e-53 | FFCP PHASE2:Hg19::chr9:92049035..92049042,+#_f9ecb6b258594e3ebe22af717ca7a7a2 | p@chr9:92049035..92049042, + |
| 2.19e-53 | FFCP PHASE1:Hg19::chr12:108238355..108238361,+#_f9ecb6b258594e3ebe22af717ca7a7a2 | p@chr12:108238355..108238361, + |
| 2.19e-53 | FFCP PHASE2:Hg19::chr17:78682732..78682739,+#_f9ecb6b258594e3ebe22af717ca7a7a2 | p@chr17:78682732..78682739, + |
| 2.19e-53 | FFCP PHASE2:Hg19::chr16:812453..812461,+#_f9ecb6b258594e3ebe22af717ca7a7a2 | p20@MSLN |
| 2.19e-53 | FFCP PHASE1:Hg19::chr17:78682732..78682739,+#_f9ecb6b258594e3ebe22af717ca7a7a2 | p@chr17:78682732..78682739, + |
| 2.87e-53 | FFCP PHASE2:Hg19::chr3:56658899..56658908,-#_70e01019fe7a38580a650b52bd2157b7 | p@chr3:56658899..56658908, - |
| 2.87e-53 | FFCP PHASE2:Hg19::chr16:75845678..75845682,+#_70e01019fe7a38580a650b52bd2157b7 | p@chr16:75845678..75845682, + |
| 2.87e-53 | FFCP PHASE1:Hg19::chr16:75845678..75845682,+#_70e01019fe7a38580a650b52bd2157b7 | p@chr16:75845678..75845682, + |
| 2.87e-53 | FFCP PHASE1:Hg19::chr1:43534539..43534544,+#_70e01019fe7a38580a650b52bd2157b7 | p@chr1:43534539..43534544, + |
| 2.87e-53 | FFCP PHASE2:Hg19::chr1:43534539..43534544,+#_70e01019fe7a38580a650b52bd2157b7 | p@chr1:43534539..43534544, + |
| 2.87e-53 | FFCP PHASE1:Hg19::chr3:56658899..56658908,-#_70e01019fe7a38580a650b52bd2157b7 | p@chr3:56658899..56658908, - |
| 3.74e-53 | FFCP PHASE1:Hg19::chr1:799209..799212,+#_afbc4756d376a371e142dab32f72f3a1 | p@chr1:799209..799212, + |
| 3.74e-53 | FFCP PHASE2:Hg19::chr1:799209..799212,+#_afbc4756d376a371e142dab32f72f3a1 | p@chr1:799209..799212, + |
| 3.74e-53 | FFCP PHASE1:Hg19::chr19:9087492..9087495,-#_afbc4756d376a371e142dab32f72f3a1 | p@chr19:9087492..9087495, - |
| 3.74e-53 | FFCP PHASE1:Hg19::chr12:40977355..40977359,+#_afbc4756d376a371e142dab32f72f3a1 | p@chr12:40977355..40977359, + |
| 3.74e-53 | FFCP PHASE2:Hg19::chr19:9087492..9087495,-#_afbc4756d376a371e142dab32f72f3a1 | p@chr19:9087492..9087495, - |
| 3.74e-53 | FFCP PHASE2:Hg19::chr12:40977355..40977359,+#_afbc4756d376a371e142dab32f72f3a1 | p@chr12:40977355..40977359, + |
| 1.15e-51 | FFCP PHASE1:Hg19::chr10:125623630..125623648,-#_a11ca9fe1049ab1c6f8bc2caf1c97ab6 | p@chr10:125623630..125623648, - |
| 1.15e-51 | FFCP PHASE2:Hg19::chr10:125623630..125623648,-#_a11ca9fe1049ab1c6f8bc2caf1c97ab6 | p@chr10:125623630..125623648, - |
| 1.94e-51 | FFCP PHASE2:Hg19::chr6:31083672..31083681,-#_80854c574767d75041916ac23b107e4c | p@chr6:31083672..31083681, - |
| 1.94e-51 | FFCP PHASE1:Hg19::chr11:1949831..1949837,+#_80854c574767d75041916ac23b107e4c | p@chr11:1949831..1949837, + |
| 1.94e-51 | FFCP PHASE2:Hg19::chr11:2150347..2150380,+#_80854c574767d75041916ac23b107e4c | p3@BC104421 |
| 1.94e-51 | FFCP PHASE2:Hg19::chr11:1949831..1949837,+#_80854c574767d75041916ac23b107e4c | p@chr11:1949831..1949837, + |
| 1.94e-51 | FFCP PHASE1:Hg19::chr6:31083672..31083681,-#_80854c574767d75041916ac23b107e4c | p@chr6:31083672..31083681, - |
| 1.94e-51 | FFCP PHASE1:Hg19::chr11:2150347..2150380,+#_80854c574767d75041916ac23b107e4c | p3@BC104421 |
| 3.24e-51 | FFCP PHASE2:Hg19::chr18:67944406..67944410,+#_81ec5f2846efc327117c107a5f05b25f | p@chr18:67944406..67944410, + |
| 3.24e-51 | FFCP PHASE1:Hg19::chr18:67944406..67944410,+#_81ec5f2846efc327117c107a5f05b25f | p@chr18:67944406..67944410, + |
| 4.58e-51 | FFCP PHASE2:Hg19::chr2:72375820..72375849,-#_d75ec0bda650c3bbcdbada8668d7c6da | p@chr2:72375820..72375849, - |
| 4.58e-51 | FFCP PHASE1:Hg19::chr2:72375820..72375849,-#_d75ec0bda650c3bbcdbada8668d7c6da | p@chr2:72375820..72375849, - |
| 1.89e-45 | FFCP PHASE2:Hg19::chr6:143081372..143081388,-#_1bf5d902af59eed40b07bdfeedae931a | p@chr6:143081372..143081388, - |
| 1.89e-45 | FFCP PHASE2:Hg19::chr1:43537118..43537143,+#_1bf5d902af59eed40b07bdfeedae931a | p@chr1:43537118..43537143, + |
| 1.89e-45 | FFCP PHASE1:Hg19::chr10:125623682..125623706,-#_1bf5d902af59eed40b07bdfeedae931a | p@chr10:125623682..125623706, - |
| 1.89e-45 | FFCP PHASE1:Hg19::chr6:143081372..143081388,-#_1bf5d902af59eed40b07bdfeedae931a | p@chr6:143081372..143081388, - |
| 1.89e-45 | FFCP PHASE2:Hg19::chr10:125623682..125623706,-#_1bf5d902af59eed40b07bdfeedae931a | p@chr10:125623682..125623706, - |
| 1.89e-45 | FFCP PHASE1:Hg19::chr1:43537118..43537143,+#_1bf5d902af59eed40b07bdfeedae931a | p@chr1:43537118..43537143, + |
| 2.2e-45 | FFCP PHASE1:Hg19::chr3:174581572..174581585,+#_f9681ef3400ac6434a440195900d2501 | p6@NAALADL2 |
| 2.2e-45 | FFCP PHASE2:Hg19::chr3:174581572..174581585,+#_f9681ef3400ac6434a440195900d2501 | p6@NAALADL2 |
| 2.56e-45 | FFCP PHASE1:Hg19::chr6:31083856..31083866,-#_e2c6bfb361f0c53f99b7cd9f023d3db6 | p@chr6:31083856..31083866, - |
| 2.56e-45 | FFCP PHASE2:Hg19::chr6:31083856..31083866,-#_e2c6bfb361f0c53f99b7cd9f023d3db6 | p@chr6:31083856..31083866, - |
| 3.47e-45 | FFCP PHASE1:Hg19::chr19:9057024..9057060,-#_700bac545dfd4df841a39b60768a72c3 | p@chr19:9057024..9057060, - |
| 3.47e-45 | FFCP PHASE2:Hg19::chr19:9057024..9057060,-#_700bac545dfd4df841a39b60768a72c3 | p@chr19:9057024..9057060, - |
| 5.45e-45 | FFCP PHASE2:Hg19::chr15:39561631..39561642,-#_e3668c00d0c851f4ecd0d0a57ff324fd | p@chr15:39561631..39561642, - |
| 5.45e-45 | FFCP PHASE1:Hg19::chr15:39561631..39561642,-#_e3668c00d0c851f4ecd0d0a57ff324fd | p@chr15:39561631..39561642, - |
| 6.33e-45 | FFCP PHASE2:Hg19::chr3:123512832..123512846,-#_68670847018dcf721a5029a26fba9b2e | p46@MYLK |
| 6.33e-45 | FFCP PHASE1:Hg19::chr3:123512832..123512846,-#_68670847018dcf721a5029a26fba9b2e | p46@MYLK |
| 8.55e-45 | FFCP PHASE2:Hg19::chr12:72451186..72451196,-#_c86aa0edb4f38871d446e62eda073667 | p4@ENST00000548885 |
| 8.55e-45 | FFCP PHASE1:Hg19::chr12:72451186..72451196,-#_c86aa0edb4f38871d446e62eda073667 | p4@ENST00000548885 |
