UBERON:0002514: Difference between revisions
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|located_in= | |located_in= | ||
Revision as of 13:32, 27 June 2012
| Name: | intramembranous bone | ||
|---|---|---|---|
| Definition: | "Bone tissue forms directly within mesenchyme, and does not replace other tissues[TAO]. Intramembranous ossification is the formation of bone in which osteoblasts secrete a collagen-proteoglycan matrix that binds calcium salts and becomes calcified[GO]. Intramembranous ossification is the way flat bones and the shell of a turtle are formed[GO]. Unlike endochondral ossification, cartilage is not present during intramembranous ossification[WP]." [GO:0001957, Wikipedia:Intramembranous_ossification] | ||
| Xrefs: |
| ||
| Synonyms: | "membrane bone" RELATED [AEO:0000085] | ||
| Alt_id: | UBERON:MA_0002837-ZFA_0001635 |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0001474(bone element) |
|---|---|
| develops_from: | UBERON:0003104(mesenchyme) |
Children
| is a: | UBERON:0002244 (premaxilla),UBERON:0002397 (maxilla) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10813-111B3 (normal embryonic palatal mesenchymal cell line:HEPM)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002514 (intramembranous bone), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE2:Hg19::chr17:54893192..54893195,-#_a7077f2e3b9fe96fb7dda1d7da71929f | p14@C17orf67 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr17:54893192..54893195,-#_a7077f2e3b9fe96fb7dda1d7da71929f | p14@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893292..54893300,-#_eb31da55f19578a6763d1bcaa4f394be | p13@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893213..54893220,-#_eb31da55f19578a6763d1bcaa4f394be | p12@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:57353655..57353662,-#_eb31da55f19578a6763d1bcaa4f394be | p@chr8:57353655..57353662, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893269..54893278,-#_eb31da55f19578a6763d1bcaa4f394be | p11@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893292..54893300,-#_eb31da55f19578a6763d1bcaa4f394be | p13@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893213..54893220,-#_eb31da55f19578a6763d1bcaa4f394be | p12@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:57353655..57353662,-#_eb31da55f19578a6763d1bcaa4f394be | p@chr8:57353655..57353662, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893269..54893278,-#_eb31da55f19578a6763d1bcaa4f394be | p11@C17orf67 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr4:151503647..151503656,+#_a96ea19f65b95520c848592d8c3bb6f1 | p14@MAB21L2 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr5:75912402..75912418,-#_a96ea19f65b95520c848592d8c3bb6f1 | p@chr5:75912402..75912418, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr5:75912402..75912418,-#_a96ea19f65b95520c848592d8c3bb6f1 | p@chr5:75912402..75912418, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr4:151503647..151503656,+#_a96ea19f65b95520c848592d8c3bb6f1 | p14@MAB21L2 |
| 4.66e-66 | FFCP PHASE2:Hg19::chr4:151505582..151505614,+#_cb493a05078c2cabbd3035b627db98d2 | p@chr4:151505582..151505614, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr4:151505582..151505614,+#_cb493a05078c2cabbd3035b627db98d2 | p@chr4:151505582..151505614, + |
| 1.46e-50 | FFCP PHASE1:Hg19::chr3:157823323..157823328,+#_5e73d951729c6885d520ff45ac1009f3 | p17@RSRC1 |
| 1.46e-50 | FFCP PHASE1:Hg19::chr8:57354278..57354286,+#_5e73d951729c6885d520ff45ac1009f3 | p@chr8:57354278..57354286, + |
| 1.46e-50 | FFCP PHASE2:Hg19::chr8:57354278..57354286,+#_5e73d951729c6885d520ff45ac1009f3 | p@chr8:57354278..57354286, + |
| 1.46e-50 | FFCP PHASE2:Hg19::chr17:54893196..54893207,-#_5e73d951729c6885d520ff45ac1009f3 | p9@C17orf67 |
| 1.46e-50 | FFCP PHASE2:Hg19::chr3:157823323..157823328,+#_5e73d951729c6885d520ff45ac1009f3 | p17@RSRC1 |
| 1.46e-50 | FFCP PHASE1:Hg19::chr17:54893196..54893207,-#_5e73d951729c6885d520ff45ac1009f3 | p9@C17orf67 |
| 2.42e-50 | FFCP PHASE1:Hg19::chr8:57802672..57802682,-#_5cae14decd4efe8a57e1035f2d35794f | p@chr8:57802672..57802682, - |
| 2.42e-50 | FFCP PHASE2:Hg19::chr8:57802672..57802682,-#_5cae14decd4efe8a57e1035f2d35794f | p@chr8:57802672..57802682, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr5:75913767..75913778,-#_57cc08dd1bd9389f0404c280c6de9969 | p@chr5:75913767..75913778, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr12:85673913..85673919,+#_57cc08dd1bd9389f0404c280c6de9969 | p7@ALX1 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr17:76930661..76930674,+#_57cc08dd1bd9389f0404c280c6de9969 | p1@AK123925 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr5:75913767..75913778,-#_57cc08dd1bd9389f0404c280c6de9969 | p@chr5:75913767..75913778, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr12:85673913..85673919,+#_57cc08dd1bd9389f0404c280c6de9969 | p7@ALX1 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr17:76930661..76930674,+#_57cc08dd1bd9389f0404c280c6de9969 | p1@AK123925 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr2:33519090..33519092,+#_89be10955720bd3b74a0855a7353724e | p@chr2:33519090..33519092, + |
| 6.58e-50 | FFCP PHASE1:Hg19::chr13:28961248..28961262,-#_89be10955720bd3b74a0855a7353724e | p23@FLT1 |
| 6.58e-50 | FFCP PHASE1:Hg19::chr2:33519090..33519092,+#_89be10955720bd3b74a0855a7353724e | p@chr2:33519090..33519092, + |
| 6.58e-50 | FFCP PHASE2:Hg19::chr13:28961248..28961262,-#_89be10955720bd3b74a0855a7353724e | p23@FLT1 |
| 6.62e-41 | FFCP PHASE2:Hg19::chr8:57353666..57353675,-#_cf57feb5c470e4987c159b54e864803e | p@chr8:57353666..57353675, - |
| 6.62e-41 | FFCP PHASE1:Hg19::chr8:57353779..57353790,-#_cf57feb5c470e4987c159b54e864803e | p@chr8:57353779..57353790, - |
| 6.62e-41 | FFCP PHASE1:Hg19::chr8:57354143..57354152,+#_cf57feb5c470e4987c159b54e864803e | p@chr8:57354143..57354152, + |
| 6.62e-41 | FFCP PHASE1:Hg19::chr8:57353666..57353675,-#_cf57feb5c470e4987c159b54e864803e | p@chr8:57353666..57353675, - |
| 6.62e-41 | FFCP PHASE2:Hg19::chr8:57354143..57354152,+#_cf57feb5c470e4987c159b54e864803e | p@chr8:57354143..57354152, + |
| 6.62e-41 | FFCP PHASE2:Hg19::chr8:57353779..57353790,-#_cf57feb5c470e4987c159b54e864803e | p@chr8:57353779..57353790, - |
| 1.48e-40 | FFCP PHASE2:Hg19::chr1:75600308..75600316,+#_db72ca8556297fa2ad8d17684d3beb92 | p8@LHX8 |
| 1.48e-40 | FFCP PHASE1:Hg19::chr1:6615391..6615401,+#_db72ca8556297fa2ad8d17684d3beb92 | p2@TAS1R1 |
| 1.48e-40 | FFCP PHASE1:Hg19::chr20:49253452..49253461,-#_db72ca8556297fa2ad8d17684d3beb92 | p12@FAM65C |
| 1.48e-40 | FFCP PHASE2:Hg19::chr20:49253452..49253461,-#_db72ca8556297fa2ad8d17684d3beb92 | p12@FAM65C |
| 1.48e-40 | FFCP PHASE1:Hg19::chr1:75600308..75600316,+#_db72ca8556297fa2ad8d17684d3beb92 | p8@LHX8 |
| 1.48e-40 | FFCP PHASE2:Hg19::chr1:6615391..6615401,+#_db72ca8556297fa2ad8d17684d3beb92 | p2@TAS1R1 |
| 2.21e-40 | FFCP PHASE2:Hg19::chr5:75912831..75912842,-#_a883ebc33d2b51e0ab1ed7266f6bbf0a | p@chr5:75912831..75912842, - |
| 2.21e-40 | FFCP PHASE2:Hg19::chr16:67687543..67687559,-#_a883ebc33d2b51e0ab1ed7266f6bbf0a | p@chr16:67687543..67687559, - |
| 2.21e-40 | FFCP PHASE1:Hg19::chr5:75912831..75912842,-#_a883ebc33d2b51e0ab1ed7266f6bbf0a | p@chr5:75912831..75912842, - |
| 2.21e-40 | FFCP PHASE1:Hg19::chr16:67687543..67687559,-#_a883ebc33d2b51e0ab1ed7266f6bbf0a | p@chr16:67687543..67687559, - |
| 3.3e-40 | FFCP PHASE2:Hg19::chr6:46190219..46190230,-#_7aabaef326eb6fb2acce9bcf9b655ede | p@chr6:46190219..46190230, - |
| 3.3e-40 | FFCP PHASE1:Hg19::chr9:125165007..125165016,+#_7aabaef326eb6fb2acce9bcf9b655ede | p@chr9:125165007..125165016, + |
| 3.3e-40 | FFCP PHASE1:Hg19::chr6:46190219..46190230,-#_7aabaef326eb6fb2acce9bcf9b655ede | p@chr6:46190219..46190230, - |
| 3.3e-40 | FFCP PHASE2:Hg19::chr9:125165007..125165016,+#_7aabaef326eb6fb2acce9bcf9b655ede | p@chr9:125165007..125165016, + |
| 1.84e-34 | FFCP PHASE1:Hg19::chr8:57359557..57359570,-#_18c06f93c83199f42eb02ad962ea0dcf | p5@PENK |
| 1.84e-34 | FFCP PHASE2:Hg19::chr10:15760985..15760992,-#_18c06f93c83199f42eb02ad962ea0dcf | p@chr10:15760985..15760992, - |
| 1.84e-34 | FFCP PHASE2:Hg19::chr8:57359557..57359570,-#_18c06f93c83199f42eb02ad962ea0dcf | p5@PENK |
| 1.84e-34 | FFCP PHASE1:Hg19::chr4:8594472..8594473,+#_18c06f93c83199f42eb02ad962ea0dcf | p4@CPZ |
| 1.84e-34 | FFCP PHASE1:Hg19::chr10:15760985..15760992,-#_18c06f93c83199f42eb02ad962ea0dcf | p@chr10:15760985..15760992, - |
| 1.84e-34 | FFCP PHASE2:Hg19::chr4:8594472..8594473,+#_18c06f93c83199f42eb02ad962ea0dcf | p4@CPZ |
| 2.58e-34 | FFCP PHASE2:Hg19::chr14:61125018..61125037,-#_54143d7fccfeef8ef10ab96783615919 | p9@SIX1 |
| 2.58e-34 | FFCP PHASE1:Hg19::chr14:61125018..61125037,-#_54143d7fccfeef8ef10ab96783615919 | p9@SIX1 |
| 5.05e-34 | FFCP PHASE1:Hg19::chr6:134327986..134327991,-#_7e1214622e3b5170151fe231399cbab4 | p@chr6:134327986..134327991, - |
| 5.05e-34 | FFCP PHASE2:Hg19::chr6:134327986..134327991,-#_7e1214622e3b5170151fe231399cbab4 | p@chr6:134327986..134327991, - |
| 7.06e-34 | FFCP PHASE2:Hg19::chr8:57353676..57353688,-#_bb4754e90212e9fee78c437100d49853 | p@chr8:57353676..57353688, - |
| 7.06e-34 | FFCP PHASE1:Hg19::chr13:58291223..58291226,+#_bb4754e90212e9fee78c437100d49853 | p@chr13:58291223..58291226, + |
| 7.06e-34 | FFCP PHASE1:Hg19::chr8:57353676..57353688,-#_bb4754e90212e9fee78c437100d49853 | p@chr8:57353676..57353688, - |
| 7.06e-34 | FFCP PHASE2:Hg19::chr13:58291223..58291226,+#_bb4754e90212e9fee78c437100d49853 | p@chr13:58291223..58291226, + |
| 9.85e-34 | FFCP PHASE2:Hg19::chr5:127873659..127873667,-#_0d3fd292adef110f2997daa97721291c | p12@FBN2 |
| 9.85e-34 | FFCP PHASE2:Hg19::chr5:19721484..19721507,-#_0d3fd292adef110f2997daa97721291c | p@chr5:19721484..19721507, - |
| 9.85e-34 | FFCP PHASE2:Hg19::chrX:133792540..133792551,-#_0d3fd292adef110f2997daa97721291c | p4@PLAC1 |
| 9.85e-34 | FFCP PHASE1:Hg19::chr5:127873659..127873667,-#_0d3fd292adef110f2997daa97721291c | p12@FBN2 |
| 9.85e-34 | FFCP PHASE1:Hg19::chr5:19721484..19721507,-#_0d3fd292adef110f2997daa97721291c | p@chr5:19721484..19721507, - |
| 9.85e-34 | FFCP PHASE1:Hg19::chrX:133792540..133792551,-#_0d3fd292adef110f2997daa97721291c | p4@PLAC1 |
| 7.48e-30 | FFCP PHASE1:Hg19::chr8:57353982..57353991,-#_3c47ba577cef5d986d2c41fa5bbb52eb | p@chr8:57353982..57353991, - |
| 7.48e-30 | FFCP PHASE2:Hg19::chr8:57354360..57354367,+#_3c47ba577cef5d986d2c41fa5bbb52eb | p@chr8:57354360..57354367, + |
| 7.48e-30 | FFCP PHASE2:Hg19::chr8:57353982..57353991,-#_3c47ba577cef5d986d2c41fa5bbb52eb | p@chr8:57353982..57353991, - |
| 7.48e-30 | FFCP PHASE1:Hg19::chr8:57353804..57353821,-#_3c47ba577cef5d986d2c41fa5bbb52eb | p@chr8:57353804..57353821, - |
| 7.48e-30 | FFCP PHASE1:Hg19::chr8:57354360..57354367,+#_3c47ba577cef5d986d2c41fa5bbb52eb | p@chr8:57354360..57354367, + |
| 7.48e-30 | FFCP PHASE2:Hg19::chr8:57353804..57353821,-#_3c47ba577cef5d986d2c41fa5bbb52eb | p@chr8:57353804..57353821, - |
| 9.99e-30 | FFCP PHASE2:Hg19::chr3:157824322..157824334,-#_28f8408f4e0357dce981f10d46855b13 | p7@SHOX2 |
| 9.99e-30 | FFCP PHASE1:Hg19::chr10:15762107..15762114,-#_28f8408f4e0357dce981f10d46855b13 | p10@ITGA8 |
| 9.99e-30 | FFCP PHASE2:Hg19::chr10:15762107..15762114,-#_28f8408f4e0357dce981f10d46855b13 | p10@ITGA8 |
| 9.99e-30 | FFCP PHASE1:Hg19::chr3:157824322..157824334,-#_28f8408f4e0357dce981f10d46855b13 | p7@SHOX2 |
| 1.33e-29 | FFCP PHASE1:Hg19::chrX:132670143..132670152,-#_b131ee736fd685a5a6db86f215c89691 | p@chrX:132670143..132670152, - |
| 1.33e-29 | FFCP PHASE1:Hg19::chr22:28193943..28193956,-#_b131ee736fd685a5a6db86f215c89691 | p@chr22:28193943..28193956, - |
| 1.33e-29 | FFCP PHASE2:Hg19::chrX:132670143..132670152,-#_b131ee736fd685a5a6db86f215c89691 | p@chrX:132670143..132670152, - |
| 1.33e-29 | FFCP PHASE2:Hg19::chr17:79071218..79071221,-#_b131ee736fd685a5a6db86f215c89691 | p@chr17:79071218..79071221, - |
| 1.33e-29 | FFCP PHASE2:Hg19::chr22:28193943..28193956,-#_b131ee736fd685a5a6db86f215c89691 | p@chr22:28193943..28193956, - |
| 1.33e-29 | FFCP PHASE1:Hg19::chr17:79071218..79071221,-#_b131ee736fd685a5a6db86f215c89691 | p@chr17:79071218..79071221, - |
| 1.78e-29 | FFCP PHASE2:Hg19::chr1:21904551..21904569,-#_5a9f89c474fd7431a727af9d7b429349 | p@chr1:21904551..21904569, - |
| 1.78e-29 | FFCP PHASE1:Hg19::chr1:21904551..21904569,-#_5a9f89c474fd7431a727af9d7b429349 | p@chr1:21904551..21904569, - |
| 3.16e-29 | FFCP PHASE1:Hg19::chr14:89044406..89044416,+#_8b92b45f8a21cc658f42e0991c3d0ffa | p@chr14:89044406..89044416, + |
| 3.16e-29 | FFCP PHASE1:Hg19::chr8:57359975..57359992,-#_8b92b45f8a21cc658f42e0991c3d0ffa | p@chr8:57359975..57359992, - |
| 3.16e-29 | FFCP PHASE2:Hg19::chr1:156470861..156470868,-#_8b92b45f8a21cc658f42e0991c3d0ffa | p18@MEF2D |
| 3.16e-29 | FFCP PHASE2:Hg19::chr14:89044406..89044416,+#_8b92b45f8a21cc658f42e0991c3d0ffa | p@chr14:89044406..89044416, + |
| 3.16e-29 | FFCP PHASE2:Hg19::chr8:57359975..57359992,-#_8b92b45f8a21cc658f42e0991c3d0ffa | p@chr8:57359975..57359992, - |
| 3.16e-29 | FFCP PHASE1:Hg19::chr1:156470861..156470868,-#_8b92b45f8a21cc658f42e0991c3d0ffa | p18@MEF2D |
| 4.2e-29 | FFCP PHASE2:Hg19::chr1:6615468..6615485,+#_04f4da55b4c4ab820c86fe2811c01216 | p1@TAS1R1 |
| 4.2e-29 | FFCP PHASE1:Hg19::chr4:151503350..151503358,+#_04f4da55b4c4ab820c86fe2811c01216 | p11@MAB21L2 |
Property "Property value" (as page type) with input value "UBPROP:0000001 "Bone that forms directly within mesenchyme, and does not replace other tissues.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
