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MacroAPE 1083:CNhs12087 bu f1: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;53.93680191691507;66.15591762384128;475.6831876786141;173.2240927806295!2;333.7241194548965;87.82218713626892;107.35218399866457;240.1015094...")
 
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8I8;0.970605!12182-129A4;0.850263!12183-129A5;0.741087!12184-129A6;0.921202!10809-111A8;0.823784!10597-108E3;0.0986048!10717-109I6;0.0447059!10455-106G5;0.00622691!10534-107G3;0.136907!10429-106D6;0.167236!10464-106H5;0.217139!10827-111C8;0.401712!10789-110H6;0.0514603!10828-111C9;0.237794!10788-110H5;0.00888482!10792-110H9;0.0384537!10765-110E9;0.221563!10829-111D1;0.0407782!10830-111D2;0.0461831!10831-111D3;0.101975!10832-111D4;0.0395121!10833-111D5;0.0159837!10764-110E8;0.0108095!10770-110F5;0.0142329!10399-106A3;0.0597305!10400-106A4;0.00908151!10405-106A9;0.020282!10834-111D6;0.00517618!10835-111D7;0.0139135!10836-111D8;0.00278476!10837-111D9;0.257287!10699-109G6;0.0422983!10802-111A1;0.00599763!10796-110I4;0.00773458!10010-101C1;0.29557!10810-111A9;0.22446!10421-106C7;0.0221936!10708-109H6;0.288949!12235-129G3;0.0182489!12236-129G4;0.000298744!12237-129G5;1.9953e-05!10167-103B5;0.000686735!10151-102I7;0.85966!10428-106D5;0.686036!10795-110I3;0.481015!10805-111A4;0.0165529!10052-101G7;0.677557!10189-103D9;0.0152188!10589-108D4;0.0100524!10425-106D2;0.248045!10427-106D4;0.192317!10702-109G9;0.160714!10432-106D9;0.352604!10496-107C1;0.0754198!10718-109I7;0.0206905!10011-101C2;0.00605956!10053-101G8;0.00438483!10686-109F2;0.506528!10084-102B3;0.506125!10012-101C3;0.689199!10085-102B4;0.563431!10482-107A5;0.80294!10419-106C5;0.122619!10080-102A8;0.378062!10760-110E4;0.0202879!10709-109H7;0.00113931!10710-109H8;9.08179e-06!10703-109H1;0.0409237!10719-109I8;0.706135!10642-109A3;0.057596!10177-103C6;0.233431!10164-103B2;0.705639!10173-103C2;0.661671!10166-103B4;0.927764!10083-102B2;0.816333!10188-103D8;0.811043!10552-107I3;0.357705!10553-107I4;0.372186!10013-101C4;0.000184785!10536-107G5;0.00488799!10618-108G6;0.649712!10423-106C9;0.0170292!10785-110H2;0.0285615!12238-129G6;0.00387569!12239-129G7;0.000163353!12240-129G8;1.64413e-05!10416-106C2;2.3244e-05!10801-110I9;0.850846!10766-110F1;0.0251791!10824-111C5;0.048861!10825-111C6;0.1001!10826-111C7;0.108526!10454-106G4;0.0612091!10409-106B4;0.0448718!10638-108I8;0.00598731!10636-108I6;0.053279!10513-107D9;0.0134247!10420-106C6;0.397149!10082-102B1;0.206332!10014-101C5;0.0403593!10070-101I7;0.00148303!10452-106G2;0.00417776!10453-106G3;0.00457736!10449-106F8;0.0104828!10042-101F6;0.0134833!10069-101I6;0.528166!10193-103E4;0.0537942!10631-108I1;0.652841!10438-106E6;0.0741361!10488-107B2;0.000347033!10196-103E7;0.051548!10071-101I8;6.1051e-05!10071-101I8;0.0112928!10041-101F5;0.877591!10451-106G1;0.221522!10450-106F9;0.478148!10604-108F1;0.882446!10605-108F2;0.0659233!10606-108F3;0.0266547!10603-108E9;0.0427036!10497-107C2;0.172563!10448-106F7;0.000197222!10643-109A4;0.133904!10426-106D3;0.00944417!10431-106D8;0.00456219!10197-103E8;0.0198706!10443-106F2;5.67907e-05!10815-111B5;0.317596!10816-111B6;0.525703!10817-111B7;0.736184!10015-101C6;0.464621!10410-106B5;4.73945e-05!10054-101G9;0.155225!10758-110E2;0.000924654!10711-109H9;0.0818566!10040-101F4;0.00675015!10470-106I2;0.634833!10415-106C1;0.00225309!10198-103E9;0.00483265!10614-108G2;2.71166e-05!10612-108F9;0.135988!10549-107H9;0.00478716!10615-108G3;0.239894!10487-107B1;0.955933!10433-106E1;0.234303!10688-109F4;0.731162!10444-106F3;0.000680547!10444-106F3;0.416726!10485-107A8;0.437999!10413-106B8;0.11566!10175-103C4;0.570506!10161-103A8;0.78892!12131-128D7;0.849159!10624-108H3;0.0615209!10712-109I1;0.25543!10205-103F7;0.00707769!10206-103F8;0.125709!10207-103F9;0.061185!10050-101G5;0.483159!10051-101G6;0.000982763!10016-101C7;0.0547566!10046-101G1;0.13701!10778-110G4;0.0459188!10633-108I3;0.526535!10818-111B8;0.304231!10819-111B9;0.764272!10820-111C1;0.794558!10484-107A7;0.727616!10808-111A7;0.134742!10169-103B7;0.0814428!10153-102I9;0.702789!13425-144D5;0.613704!13433-144E4;0.013754!13437-144E8;0.0300669!11904-125F5;0.0552703!11905-125F6;0.986058!10039-101F3;0.720971!10791-110H8;0.708568!10017-101C8;0.321933!10045-101F9;3.76042e-08!10509-107D5;0.000228081!10839-111E2;0.800665!10692-109F8;0.615681!10079-102A7;0.0640691!10078-102A6;0.0527552!10721-110A1;0.114108!10569-108B2;0.12468!10570-108B3;0.385595!10571-108B4;0.534893!10647-109A8;0.190565!10752-110D5;0.554188!10782-110G8;0.0062424!10726-110A6;0.00444106!10018-101C9;0.0587272!10086-102B5;0.0280217!10182-103D2;0.111886!10165-103B3;0.657923!10499-107C4;0.659893!10408-106B3;0.247607!10019-101D1;3.25132e-05!10068-101I5;5.57318e-06!10075-102A3;9.16056e-09!10077-102A5;1.38264e-06!10727-110A7;0.33299!10775-110G1;0.227081!10412-106B7;0.321639!12231-129F8;0.000329339!12232-129F9;0.208978!12233-129G1;0.260183!12234-129G2;0.135037!10414-106B9;0.124604!10170-103B8;0.100267!10183-103D3;0.699784!10150-102I6;0.797276!10174-103C3;0.650729!10155-103A2;0.148603!10038-101F2;0.310976!10838-111E1;0.315017!10759-110E3;0.383614!10514-107E1;0.871462!10465-106H6;0.148021!10691-109F7;0.089999!10843-111E6;0.854659!10844-111E7;0.428009!11747-123G1;0.86419!11748-123G2;0.0572085!11749-123G3;0.0276248!11750-123G4;0.0538671!11751-123G5;0.227433!11840-124H4;0.815079!11752-123G6;0.768229!11753-123G7;0.245543!11754-123G8;0.117659!11755-123G9;0.124898!11756-123H1;0.0735319!11833-124G6;0.354283!11760-123H5;0.241999!11836-124G9;0.536141!11758-123H3;0.0691125!11835-124G8;0.323788!11762-123H7;0.55035!11838-124H2;0.788266!11757-123H2;0.967271!11759-123H4;0.870349!11761-123H6;0.0742071!11842-124H6;0.236362!11837-124H1;0.063263!10568-108B1;0.800366!13230-141I8;0.142791!13231-141I9;0.110726!10696-109G3;0.151408!10493-107B7;0.689806!10494-107B8;0.263126!10850-111F4;0.15346!10851-111F5;0.307353!10852-111F6;0.842899!10853-111F7;0.627206!10854-111F8;0.348883!10855-111F9;0.286065!10856-111G1;0.157749!10847-111F1;0.127461!10846-111E9;0.234454!10848-111F2;0.695834!10845-111E8;0.563011!10857-111G2;0.161846!10858-111G3;0.451857!10156-103A3;0.0812233!11901-125F2;0.752295!11902-125F3;0.846161!11903-125F4;0.690482!10689-109F5;0.738187!10648-109A9;0.11911!10784-110H1;0.984023!10744-110C6;0.396134!10772-110F7;0.00366211!10474-106I6;0.120814!10600-108E6;0.929577!10684-109E9;0.0398847!12226-129F3;7.5471e-11!12227-129F4;4.76322e-05!10508-107D4;3.98547e-09!10539-107G8;0.190322!10607-108F4;0.102331!10555-107I6;0.0866799!10774-110F9;0.0671395!10637-108I7;0.00170887!10663-109C6;0.0134016!10728-110A8;0.128596!10729-110A9;0.011184!10430-106D7;0.358729!10730-110B1;0.257796!10813-111B3;0.6066!10812-111B2;0.52348!10037-101F1;0.561602!10172-103C1;0.606045!10163-103B1;0.730366!10076-102A4;0.631989!10073-102A1;0.740699!10036-101E9;0.630581!10195-103E6;0.710207!10277-104E7;0.638038!10434-106E2;0.585736!10550-107I1;0.0087364!10545-107H5;0.700654!10544-107H4;0.000327871!10704-109H2;0.0798219!10510-107D6;0.0656343!10558-107I9;0.428385!10020-101D2;0.4078!10732-110B3;0.00142561!10049-101G4;0.0277216!10698-109G5;0.00308064!10437-106E5;0.0544246!10417-106C3;0.149537!10035-101E8;0.0310039!10171-103B9;0.61389!10157-103A4;0.956006!10034-101E7;0.649301!10072-101I9;0.678309!10199-103F1;0.695499!10200-103F2;2.72001e-05!10697-109G4;0.0015914!10723-110A3;0.117274!10179-103C8;1.52965e-06!10160-103A7;0.433599!10180-103C9;0.410825!10162-103A9;0.0098183!10021-101D3;0.0198897!10840-111E3;9.10923e-06!10706-109H4;0.421713!10033-101E6;0.0822029!10032-101E5;0.461544!10490-107B4;0.680183!10439-106E7;0.0312357!10022-101D4;0.18325!10176-103C5;0.000805678!10469-106I1;0.770325!10067-101I4;0.584364!10411-106B6;0.136986!10471-106I3;0.000377307!10030-101E3;0.314898!10475-106I7;0.0273612!10787-110H4;0.389857!10477-106I9;0.266058!10695-109G2;0.889487!11771-123I7;0.905286!11772-123I8;0.0405001!11773-123I9;0.0590418!10093-102C3;0.0164746!10442-106F1;2.62032e-06!10442-106F1;0.109054!10201-103F3;0.0983718!10639-108I9;0.00176637!11843-124H7;0.000185747!11841-124H5;0.22666!10693-109F9;0.271469!10436-106E4;0.0190726!10483-107A6;0.187782!10282-104F3;0.028283!10023-101D5;0.0310039!10066-101I3;0.0848178!10065-101I2;0.0475961!10800-110I8;0.000832317!10610-108F7;0.714131!10841-111E4;0.119356!10541-107H1;0.00248801!10842-111E5;0.333415!10562-108A4;0.0413166!10024-101D6;0.105006!10064-101I1;0.000112886!10609-108F6;0.000506078!10048-101G3;0.0494588!10781-110G7;0.094384!10181-103D1;0.0434889!10159-103A6;0.43341!10056-101H2;0.55081!10737-110B8;0.276923!10025-101D7;0.160026!10044-101F8;0.107903!10424-106D1;0.191433!10463-106H4;0.0660846!10616-108G4;0.000657595!10486-107A9;0.00978436!10062-101H8;0.115755!10202-103F4;7.40424e-06!10158-103A5;1.55716e-07!10441-106E9;0.603471!10031-101E4;0.214095!10063-101H9;0.703289!10063-101H9;0.728477!11763-123H8;0.00146341!11765-123I1;0.695271!11768-123I4;0.840164!10807-111A6;0.440913!10790-110H7;0.732503!10798-110I6;0.918646!10786-110H3;0.660076!10591-108D6;8.15754e-06!10593-108D8;0.000984497!10590-108D5;1.43222e-05!10026-101D8;0.0753052!10096-102C6;0.0951386!10168-103B6;0.899894!10154-103A1;0.710556!10209-103G2;0.791819!10061-101H7;2.31603e-05!10027-101D9;5.70169e-05!10043-101F7;0.0119764!10783-110G9;2.8472e-06!10028-101E1;0.808323!10060-101H6;1.45599e-05!10203-103F5;1.24695e-05!10059-101H5;5.1749e-05!10047-101G2;0.000149246!10029-101E2;6.43236e-06!10058-101H4;3.34454e-07!10418-106C4;1.29816e-05!10492-107B6;0.0417743!10694-109G1;0.930501!10797-110I5;0.359513!10057-101H3;0.701204!10100-102D1;0.000959076!10055-101H1;0.0131727!10204-103F6;0.00224767!10191-103E2;0.00372705!10563-108A5;0.00546964
|name=CNhs12087_bu_f1
|name=CNhs12087_bu_f1
|tomtom_result=sna#MA0086.1;-4;0.000124983;0.0594921;0.118703;6;GACTCAGGTGTC;CAGGTG;+!tin#MA0247.1;-2;0.00109678;0.522068;0.404352;8;GACTCAGGTGTC;CTCAAGTG;+!ARR1#MA0274.1;-1;0.00127724;0.607965;0.404352;8;GACTCAGGTGTC;ATTCAAGT;-!ZEB1#MA0103.1;-4;0.00244533;1.16398;0.49492;6;GACTCAGGTGTC;CAGGTG;-!vnd#MA0253.1;-1;0.00260553;1.24023;0.49492;9;GACTCAGGTGTC;TTTCAAGTG;+!ceh-22#MA0264.1;-1;0.00314238;1.49577;0.497412;11;GACTCAGGTGTC;TTTCAAGTGGT;-!ESR1#MA0112.2;0;0.00374243;1.7814;0.507767;12;GACTCAGGTGTC;GGCCCAGGTCACCCTGACCT;+!HAC1#MA0310.1;-4;0.00651024;3.09888;0.772887;8;GACTCAGGTGTC;CACGTGTC;-!MAX#MA0058.1;-3;0.0113367;5.39625;0.997635;9;GACTCAGGTGTC;TCACGTGGTC;-!EmBP-1#MA0128.1;-3;0.0119546;5.69037;0.997635;8;GACTCAGGTGTC;CCACGTGT;-!YJL103C#MA0427.1;-1;0.0142496;6.78283;0.997635;11;GACTCAGGTGTC;TCTCCGGAGCT;-!twi#MA0249.1;-1;0.0150767;7.1765;0.997635;11;GACTCAGGTGTC;TCGCATATGTTG;+!Arnt#MA0004.1;-4;0.0161564;7.69046;0.997635;6;GACTCAGGTGTC;CACGTG;-!Mycn#MA0104.2;-2;0.0192389;9.15773;0.997635;10;GACTCAGGTGTC;CGCACGTGGC;+!USF1#MA0093.1;-3;0.020015;9.52713;0.997635;7;GACTCAGGTGTC;CCACGTG;-
}}
}}

Latest revision as of 12:08, 7 September 2012

Full Name: CNhs12087_bu_f1

Motif matrix
POACGT
153.9368019169150766.15591762384128475.6831876786141173.2240927806295
2333.724119454896587.82218713626892107.35218399866457240.10150941017017
357.968615837176124429.9254799358845476.29450435067665204.81139987626273
442.74852864787955312.177678893480568.81718561167476345.2566068469654
513.078885652910536732.132643630694512.23180472542567511.556665990969371
6735.00412882496769.88749902577751213.91998691545050610.188385233804464
7312.4987984742336412.052190041217251435.93793936660788.511072117941016
8153.0311844051127524.505290209252383570.603916135055920.859609250578565
948.0190863990297428.30253734919975621.81210249788362670.8662737538868
1022.9682758962292564.94280406153642373.5048906409627307.5840294012713
1195.7318810339475107.1219929418174793.34084011294823472.8052859112869
1284.95390887887714364.6221748419386686.44638954706483232.97752673211923

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
sna#MA0086.1-40.0001249830.05949210.1187036GACTCAGGTGTCCAGGTG+
tin#MA0247.1-20.001096780.5220680.4043528GACTCAGGTGTCCTCAAGTG+
ARR1#MA0274.1-10.001277240.6079650.4043528GACTCAGGTGTCATTCAAGT-
ZEB1#MA0103.1-40.002445331.163980.494926GACTCAGGTGTCCAGGTG-
vnd#MA0253.1-10.002605531.240230.494929GACTCAGGTGTCTTTCAAGTG+
ceh-22#MA0264.1-10.003142381.495770.49741211GACTCAGGTGTCTTTCAAGTGGT-
ESR1#MA0112.200.003742431.78140.50776712GACTCAGGTGTCGGCCCAGGTCACCCTGACCT+
HAC1#MA0310.1-40.006510243.098880.7728878GACTCAGGTGTCCACGTGTC-
MAX#MA0058.1-30.01133675.396250.9976359GACTCAGGTGTCTCACGTGGTC-
EmBP-1#MA0128.1-30.01195465.690370.9976358GACTCAGGTGTCCCACGTGT-
YJL103C#MA0427.1-10.01424966.782830.99763511GACTCAGGTGTCTCTCCGGAGCT-
twi#MA0249.1-10.01507677.17650.99763511GACTCAGGTGTCTCGCATATGTTG+
Arnt#MA0004.1-40.01615647.690460.9976356GACTCAGGTGTCCACGTG-
Mycn#MA0104.2-20.01923899.157730.99763510GACTCAGGTGTCCGCACGTGGC+
USF1#MA0093.1-30.0200159.527130.9976357GACTCAGGTGTCCCACGTG-
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