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MacroAPE 1083:CNhs11245 bl f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;149.84006736751672;473.87422973670374;247.66471158973553;306.1000626594714!2;252.46180252335438;163.71237620273456;266.2948973732554;495.009...")
 
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0.197646!10827-111C8;0.205844!10789-110H6;0.0263069!10828-111C9;0.0102256!10788-110H5;0.0414529!10792-110H9;0.0374321!10765-110E9;0.00455637!10829-111D1;0.0724163!10830-111D2;0.0624875!10831-111D3;0.0409704!10832-111D4;0.0161522!10833-111D5;0.0543898!10764-110E8;0.0541157!10770-110F5;0.0338919!10399-106A3;0.032494!10400-106A4;0.0728045!10405-106A9;0.085835!10834-111D6;0.0658804!10835-111D7;0.0371947!10836-111D8;0.0513253!10837-111D9;0.316213!10699-109G6;0.00509159!10802-111A1;0.0154866!10796-110I4;0.0421867!10010-101C1;0.0759586!10810-111A9;0.116742!10421-106C7;0.140868!10708-109H6;0.108472!12235-129G3;0.101749!12236-129G4;0.685397!12237-129G5;0.354811!10167-103B5;0.586329!10151-102I7;0.000100166!10428-106D5;0.000457047!10795-110I3;0.899843!10805-111A4;0.0285169!10052-101G7;0.495106!10189-103D9;0.0877785!10589-108D4;0.311203!10425-106D2;0.352864!10427-106D4;0.684298!10702-109G9;0.354671!10432-106D9;0.803386!10496-107C1;0.0480929!10718-109I7;0.212648!10011-101C2;0.241185!10053-101G8;0.113765!10686-109F2;0.639712!10084-102B3;0.555362!10012-101C3;0.000704197!10085-102B4;0.000262943!10482-107A5;0.00238882!10419-106C5;0.307054!10080-102A8;0.207206!10760-110E4;0.190202!10709-109H7;0.0306748!10710-109H8;0.318009!10703-109H1;0.0438173!10719-109I8;0.708015!10642-109A3;0.506546!10177-103C6;0.856797!10164-103B2;0.000936983!10173-103C2;0.000647923!10166-103B4;0.00171884!10083-102B2;0.00131264!10188-103D8;0.00113834!10552-107I3;0.000707549!10553-107I4;0.00860961!10013-101C4;0.584764!10536-107G5;0.20133!10618-108G6;0.501749!10423-106C9;0.253915!10785-110H2;0.15999!12238-129G6;0.203498!12239-129G7;0.199287!12240-129G8;0.206165!10416-106C2;0.31311!10801-110I9;0.09497!10766-110F1;0.0278024!10824-111C5;0.0148801!10825-111C6;0.0241891!10826-111C7;0.031861!10454-106G4;0.0392908!10409-106B4;0.0306742!10638-108I8;0.0155429!10636-108I6;0.0319285!10513-107D9;0.0200873!10420-106C6;0.192622!10082-102B1;0.122163!10014-101C5;0.394161!10070-101I7;0.119936!10452-106G2;0.12823!10453-106G3;0.496303!10449-106F8;0.289578!10042-101F6;0.358956!10069-101I6;0.00125861!10193-103E4;0.172608!10631-108I1;0.000241765!10438-106E6;0.094633!10488-107B2;0.0942222!10196-103E7;0.0622769!10071-101I8;0.33499!10071-101I8;0.100063!10041-101F5;0.00419723!10451-106G1;0.0536586!10450-106F9;0.0843628!10604-108F1;0.0923714!10605-108F2;0.110545!10606-108F3;0.0315918!10603-108E9;0.104479!10497-107C2;0.187363!10448-106F7;0.0214985!10643-109A4;0.0638388!10426-106D3;0.119523!10431-106D8;0.339922!10197-103E8;0.0985168!10443-106F2;0.193817!10815-111B5;0.432138!10816-111B6;0.0760279!10817-111B7;0.089999!10015-101C6;0.0741033!10410-106B5;0.151788!10054-101G9;0.236366!10758-110E2;0.0131497!10711-109H9;0.276387!10040-101F4;0.0319334!10470-106I2;0.000160872!10415-106C1;0.100524!10198-103E9;0.0172769!10614-108G2;0.175732!10612-108F9;0.122957!10549-107H9;0.0648917!10615-108G3;0.0343948!10487-107B1;0.810372!10433-106E1;0.0692928!10688-109F4;0.154322!10444-106F3;0.0858678!10444-106F3;0.299131!10485-107A8;0.401504!10413-106B8;0.105305!10175-103C4;0.0708438!10161-103A8;0.00121138!12131-128D7;0.000906647!10624-108H3;0.260461!10712-109I1;0.217402!10205-103F7;0.249473!10206-103F8;0.116666!10207-103F9;0.0712964!10050-101G5;0.171968!10051-101G6;0.149955!10016-101C7;0.0422931!10046-101G1;0.16147!10778-110G4;0.0661471!10633-108I3;0.784825!10818-111B8;0.407144!10819-111B9;0.178679!10820-111C1;0.180093!10484-107A7;0.207551!10808-111A7;0.203675!10169-103B7;0.135919!10153-102I9;0.000109544!13425-144D5;0.000682192!13433-144E4;0.510887!13437-144E8;0.634234!11904-125F5;0.457393!11905-125F6;0.862772!10039-101F3;0.939641!10791-110H8;0.000229161!10017-101C8;0.260433!10045-101F9;0.104632!10509-107D5;0.0604298!10839-111E2;0.320208!10692-109F8;0.0330965!10079-102A7;0.0883511!10078-102A6;0.159125!10721-110A1;0.200655!10569-108B2;0.0768881!10570-108B3;0.617625!10571-108B4;0.828411!10647-109A8;0.434518!10752-110D5;0.312333!10782-110G8;0.0473409!10726-110A6;0.332825!10018-101C9;0.0941802!10086-102B5;0.218888!10182-103D2;0.668002!10165-103B3;0.000389659!10499-107C4;0.00017182!10408-106B3;0.0323643!10019-101D1;0.0260364!10068-101I5;0.271539!10075-102A3;0.174948!10077-102A5;0.447808!10727-110A7;0.794745!10775-110G1;0.126896!10412-106B7;0.146836!12231-129F8;0.578653!12232-129F9;0.075617!12233-129G1;0.0741407!12234-129G2;0.175593!10414-106B9;0.226007!10170-103B8;0.13099!10183-103D3;2.78892e-05!10150-102I6;0.000102222!10174-103C3;0.000345558!10155-103A2;0.00197458!10038-101F2;0.00214455!10838-111E1;0.00117722!10759-110E3;0.932058!10514-107E1;0.310596!10465-106H6;0.0165472!10691-109F7;0.0741028!10843-111E6;0.231223!10844-111E7;0.848239!11747-123G1;0.758029!11748-123G2;0.0658074!11749-123G3;0.177146!11750-123G4;0.327227!11751-123G5;0.733963!11840-124H4;0.367401!11752-123G6;0.665746!11753-123G7;0.264694!11754-123G8;0.896486!11755-123G9;0.166809!11756-123H1;0.102393!11833-124G6;0.14381!11760-123H5;0.749027!11836-124G9;0.264804!11758-123H3;0.45741!11835-124G8;0.96271!11762-123H7;0.764056!11838-124H2;0.687578!11757-123H2;0.954845!11759-123H4;0.173528!11761-123H6;0.524294!11842-124H6;0.676511!11837-124H1;0.891625!10568-108B1;0.99114!13230-141I8;0.43662!13231-141I9;0.985383!10696-109G3;0.953519!10493-107B7;0.24135!10494-107B8;0.0421753!10850-111F4;0.153602!10851-111F5;0.0502524!10852-111F6;0.00762994!10853-111F7;0.0347925!10854-111F8;0.0119776!10855-111F9;0.361807!10856-111G1;0.444342!10847-111F1;0.0756044!10846-111E9;0.209969!10848-111F2;0.0783761!10845-111E8;0.0131735!10857-111G2;0.0745888!10858-111G3;0.0540396!10156-103A3;0.00948168!11901-125F2;0.000292324!11902-125F3;0.928699!11903-125F4;0.945057!10689-109F5;0.825711!10648-109A9;0.00131688!10784-110H1;0.0798094!10744-110C6;0.0675896!10772-110F7;0.640245!10474-106I6;0.0446767!10600-108E6;0.185782!10684-109E9;0.0790653!12226-129F3;0.288375!12227-129F4;0.320487!10508-107D4;0.00497199!10539-107G8;0.799747!10607-108F4;0.714004!10555-107I6;0.302348!10774-110F9;0.958126!10637-108I7;0.130038!10663-109C6;0.871615!10728-110A8;0.574262!10729-110A9;0.319954!10430-106D7;0.757583!10730-110B1;0.150918!10813-111B3;0.558725!10812-111B2;0.603231!10037-101F1;0.605166!10172-103C1;0.000375043!10163-103B1;0.000137989!10076-102A4;0.000621443!10073-102A1;0.000336128!10036-101E9;0.00581158!10195-103E6;0.000417196!10277-104E7;0.000327893!10434-106E2;0.0032896!10550-107I1;0.384757!10545-107H5;0.0918914!10544-107H4;0.271347!10704-109H2;0.287653!10510-107D6;0.127131!10558-107I9;0.411661!10020-101D2;0.314098!10732-110B3;0.154775!10049-101G4;0.248071!10698-109G5;0.731689!10437-106E5;0.61398!10417-106C3;0.000177268!10035-101E8;0.0859165!10171-103B9;0.000237113!10157-103A4;0.000150262!10034-101E7;0.000229247!10072-101I9;0.000334025!10199-103F1;0.00577224!10200-103F2;0.695705!10697-109G4;0.0904726!10723-110A3;0.547225!10179-103C8;0.0337516!10160-103A7;0.00205782!10180-103C9;0.000983982!10162-103A9;0.00601533!10021-101D3;0.00622106!10840-111E3;0.141954!10706-109H4;0.171221!10033-101E6;0.159871!10032-101E5;0.000397688!10490-107B4;0.000221509!10439-106E7;0.0703499!10022-101D4;0.0653744!10176-103C5;0.102613!10469-106I1;0.000325436!10067-101I4;0.139771!10411-106B6;0.0497512!10471-106I3;0.982603!10030-101E3;0.00964979!10475-106I7;0.011174!10787-110H4;0.318896!10477-106I9;0.187276!10695-109G2;0.51158!11771-123I7;0.179557!11772-123I8;0.450187!11773-123I9;0.974574!10093-102C3;0.167793!10442-106F1;0.466162!10442-106F1;0.150614!10201-103F3;0.121857!10639-108I9;0.317762!11843-124H7;0.475463!11841-124H5;0.0748477!10693-109F9;0.0176157!10436-106E4;0.117502!10483-107A6;0.171289!10282-104F3;0.151752!10023-101D5;0.0538329!10066-101I3;0.0589215!10065-101I2;0.147354!10800-110I8;0.106935!10610-108F7;0.207887!10841-111E4;0.955584!10541-107H1;0.236711!10842-111E5;0.174226!10562-108A4;0.969033!10024-101D6;0.673867!10064-101I1;0.0277438!10609-108F6;0.13286!10048-101G3;0.243111!10781-110G7;0.111005!10181-103D1;0.656221!10159-103A6;0.00100154!10056-101H2;0.00214618!10737-110B8;0.00814948!10025-101D7;0.617969!10044-101F8;0.730104!10424-106D1;0.307592!10463-106H4;0.281884!10616-108G4;0.125913!10486-107A9;0.589543!10062-101H8;0.127665!10202-103F4;0.0775736!10158-103A5;0.625569!10441-106E9;0.00256849!10031-101E4;0.517315!10063-101H9;0.000407378!10063-101H9;0.00476105!11763-123H8;0.0349745!11765-123I1;0.332323!11768-123I4;0.266992!10807-111A6;0.47922!10790-110H7;0.453904!10798-110I6;0.617664!10786-110H3;0.693051!10591-108D6;0.523543!10593-108D8;0.456872!10590-108D5;0.808351!10026-101D8;0.09753!10096-102C6;0.591224!10168-103B6;0.858064!10154-103A1;8.86649e-05!10209-103G2;0.00135347!10061-101H7;0.130993!10027-101D9;0.103443!10043-101F7;0.856205!10783-110G9;0.45393!10028-101E1;0.0213786!10060-101H6;0.291942!10203-103F5;0.136109!10059-101H5;0.18572!10047-101G2;0.25576!10029-101E2;0.313807!10058-101H4;0.318434!10418-106C4;0.0912202!10492-107B6;0.185695!10694-109G1;0.0224114!10797-110I5;0.346802!10057-101H3;0.0200155!10100-102D1;0.12313!10055-101H1;0.204421!10204-103F6;0.178054!10191-103E2;0.181929!10563-108A5;0.183335
|name=CNhs11245_bl_f2
|name=CNhs11245_bl_f2
|tomtom_result=Trl#MA0205.1;-1;4.70954e-05;0.0224174;0.0448348;10;CTGGCTCTGTC;TTGCTCTCTC;+!ECM23#MA0293.1;1;0.00347599;1.65457;1;10;CTGGCTCTGTC;TTTAGATCTTT;-!GAT4#MA0302.1;1;0.00347599;1.65457;1;10;CTGGCTCTGTC;TTTAGATCTTT;-!CRZ1#MA0285.1;0;0.00522944;2.48921;1;9;CTGGCTCTGTC;GTGGCTTAG;-!ARG81#MA0272.1;0;0.00782564;3.72501;1;8;CTGGCTCTGTC;GTGACTCT;+!BAS1#MA0278.1;5;0.00859254;4.09005;1;11;CTGGCTCTGTC;TTGACTTGACTCTGGCTGTGC;-!HAP5#MA0316.1;0;0.0149457;7.11416;1;11;CTGGCTCTGTC;TGGGATCTGATTGGT;+!REST#MA0138.2;-2;0.0156979;7.47219;1;9;CTGGCTCTGTC;GGCGCTGTCCATGGTGCTGAA;-!Dof2#MA0020.1;-2;0.0202119;9.62086;1;6;CTGGCTCTGTC;TGCTTT;-
}}
}}

Latest revision as of 12:21, 7 September 2012

Full Name: CNhs11245_bl_f2

Motif matrix
POACGT
1149.84006736751672473.87422973670374247.66471158973553306.1000626594714
2252.46180252335438163.71237620273456266.2948973732554495.0099952540834
3178.5618357016738358.142174606214795708.2290500059397232.5460110396
4204.32399371615674299.16535587607285618.385984049151355.60373771204776
533.7535083359632751133.65453512525663.0043780019335747.06664989027551
60.03.94717319500355670.01173.5318981584248
70.01162.17630648494511.1059414871578034.196823381326099
8189.786405339223995.288684299417184.283230169262407888.1207515455235
932.274238960352804377.9997904985891602.5650216443748164.64002025011092
10203.10492686863088384.4574415744566572.81114797611451517.1055549342257
11133.87266927917221524.1931839462802220.5195191953763298.8936989325991

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Trl#MA0205.1-14.70954e-050.02241740.044834810CTGGCTCTGTCTTGCTCTCTC+
ECM23#MA0293.110.003475991.65457110CTGGCTCTGTCTTTAGATCTTT-
GAT4#MA0302.110.003475991.65457110CTGGCTCTGTCTTTAGATCTTT-
CRZ1#MA0285.100.005229442.4892119CTGGCTCTGTCGTGGCTTAG-
ARG81#MA0272.100.007825643.7250118CTGGCTCTGTCGTGACTCT+
BAS1#MA0278.150.008592544.09005111CTGGCTCTGTCTTGACTTGACTCTGGCTGTGC-
HAP5#MA0316.100.01494577.11416111CTGGCTCTGTCTGGGATCTGATTGGT+
REST#MA0138.2-20.01569797.4721919CTGGCTCTGTCGGCGCTGTCCATGGTGCTGAA-
Dof2#MA0020.1-20.02021199.6208616CTGGCTCTGTCTGCTTT-
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