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MacroAPE 1083:Motif843: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;0;102202!02;0;0;0;102202!03;0;102202;0;0!04;0;102202;0;0!05;0;102202;0;0!06;37007;65195;0;0 |macroape_1083_sample_pvalues=11376-118A8;...")
 
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111C8;0.659691!10789-110H6;0.499897!10828-111C9;0.491915!10788-110H5;0.531192!10792-110H9;0.498596!10765-110E9;0.508957!10829-111D1;0.51584!10830-111D2;0.525423!10831-111D3;0.481188!10832-111D4;0.427199!10833-111D5;0.540539!10764-110E8;0.577314!10770-110F5;0.519012!10399-106A3;0.448682!10400-106A4;0.501464!10405-106A9;0.479257!10834-111D6;0.509041!10835-111D7;0.653244!10836-111D8;0.498623!10837-111D9;0.634391!10699-109G6;0.664822!10802-111A1;0.442652!10796-110I4;0.823424!10010-101C1;0.8182!10810-111A9;0.875112!10421-106C7;0.726785!10708-109H6;0.452835!12235-129G3;0.924525!12236-129G4;0.848828!12237-129G5;0.118798!10167-103B5;0.462274!10151-102I7;0.36028!10428-106D5;0.464612!10795-110I3;0.687991!10805-111A4;0.426734!10052-101G7;0.462799!10189-103D9;0.722709!10589-108D4;0.542532!10425-106D2;0.850437!10427-106D4;0.220328!10702-109G9;0.202492!10432-106D9;0.416397!10496-107C1;0.730428!10718-109I7;0.684537!10011-101C2;0.524964!10053-101G8;0.704378!10686-109F2;0.289496!10084-102B3;0.639083!10012-101C3;0.338716!10085-102B4;0.363133!10482-107A5;0.35427!10419-106C5;0.727957!10080-102A8;0.607541!10760-110E4;0.716079!10709-109H7;0.925237!10710-109H8;0.669485!10703-109H1;0.605437!10719-109I8;0.314074!10642-109A3;0.956902!10177-103C6;0.291236!10164-103B2;0.432146!10173-103C2;0.470272!10166-103B4;0.450849!10083-102B2;0.50212!10188-103D8;0.409225!10552-107I3;0.372055!10553-107I4;0.718125!10013-101C4;0.948318!10536-107G5;0.711878!10618-108G6;0.649773!10423-106C9;0.700767!10785-110H2;0.301904!12238-129G6;0.614302!12239-129G7;0.407308!12240-129G8;0.802157!10416-106C2;0.169171!10801-110I9;0.707394!10766-110F1;0.351994!10824-111C5;0.44666!10825-111C6;0.470218!10826-111C7;0.472039!10454-106G4;0.426798!10409-106B4;0.396537!10638-108I8;0.408383!10636-108I6;0.295794!10513-107D9;0.235448!10420-106C6;0.747797!10082-102B1;0.511686!10014-101C5;0.640177!10070-101I7;0.621062!10452-106G2;0.70775!10453-106G3;0.0965649!10449-106F8;0.219172!10042-101F6;0.230068!10069-101I6;0.441974!10193-103E4;0.612812!10631-108I1;0.386335!10438-106E6;0.447964!10488-107B2;0.972787!10196-103E7;0.449939!10071-101I8;0.399507!10071-101I8;0.639986!10041-101F5;0.337257!10451-106G1;0.697487!10450-106F9;0.0259419!10604-108F1;0.195468!10605-108F2;0.254752!10606-108F3;0.182155!10603-108E9;0.468161!10497-107C2;0.333334!10448-106F7;0.00781976!10643-109A4;0.56084!10426-106D3;0.835713!10431-106D8;0.690895!10197-103E8;0.278521!10443-106F2;0.588502!10815-111B5;0.743494!10816-111B6;0.760044!10817-111B7;0.76668!10015-101C6;0.833343!10410-106B5;0.537099!10054-101G9;0.579132!10758-110E2;0.424313!10711-109H9;0.730373!10040-101F4;0.670682!10470-106I2;0.342144!10415-106C1;0.809669!10198-103E9;0.843218!10614-108G2;0.47915!10612-108F9;0.582689!10549-107H9;0.558749!10615-108G3;0.996265!10487-107B1;0.948506!10433-106E1;0.459609!10688-109F4;0.777762!10444-106F3;0.410573!10444-106F3;0.424872!10485-107A8;0.472095!10413-106B8;0.495951!10175-103C4;0.131466!10161-103A8;0.40831!12131-128D7;0.51152!10624-108H3;0.683544!10712-109I1;0.385094!10205-103F7;0.353956!10206-103F8;0.844292!10207-103F9;0.727799!10050-101G5;0.670473!10051-101G6;0.802262!10016-101C7;0.930494!10046-101G1;0.990765!10778-110G4;0.739493!10633-108I3;0.424112!10818-111B8;0.706214!10819-111B9;0.311088!10820-111C1;0.318996!10484-107A7;0.255145!10808-111A7;0.710401!10169-103B7;0.47739!10153-102I9;0.412452!13425-144D5;0.471067!13433-144E4;0.911286!13437-144E8;0.915254!11904-125F5;0.583111!11905-125F6;0.123881!10039-101F3;0.0641317!10791-110H8;0.341965!10017-101C8;0.524609!10045-101F9;0.921116!10509-107D5;0.85126!10839-111E2;0.0691618!10692-109F8;0.774014!10079-102A7;0.827738!10078-102A6;0.85575!10721-110A1;0.817858!10569-108B2;0.682141!10570-108B3;0.157198!10571-108B4;0.00420854!10647-109A8;0.158052!10752-110D5;0.332269!10782-110G8;0.400309!10726-110A6;0.722115!10018-101C9;0.324203!10086-102B5;0.0559748!10182-103D2;0.149242!10165-103B3;0.420995!10499-107C4;0.470786!10408-106B3;0.730059!10019-101D1;0.609249!10068-101I5;0.945533!10075-102A3;0.810313!10077-102A5;0.754364!10727-110A7;0.449695!10775-110G1;0.566752!10412-106B7;0.243059!12231-129F8;0.180219!12232-129F9;0.645383!12233-129G1;0.329269!12234-129G2;0.376364!10414-106B9;0.466034!10170-103B8;0.724177!10183-103D3;0.303419!10150-102I6;0.382999!10174-103C3;0.426316!10155-103A2;0.440612!10038-101F2;0.496344!10838-111E1;0.363865!10759-110E3;0.570835!10514-107E1;0.740752!10465-106H6;0.740932!10691-109F7;0.737734!10843-111E6;0.902121!10844-111E7;0.209816!11747-123G1;0.115692!11748-123G2;0.225128!11749-123G3;0.275222!11750-123G4;0.306503!11751-123G5;0.508958!11840-124H4;0.603972!11752-123G6;0.51461!11753-123G7;0.476456!11754-123G8;0.453918!11755-123G9;0.211154!11756-123H1;0.552676!11833-124G6;0.68986!11760-123H5;0.0231349!11836-124G9;0.497058!11758-123H3;0.144608!11835-124G8;0.206787!11762-123H7;0.747986!11838-124H2;0.360642!11757-123H2;0.343029!11759-123H4;0.425138!11761-123H6;0.998329!11842-124H6;0.500339!11837-124H1;0.307736!10568-108B1;0.777057!13230-141I8;0.871598!13231-141I9;0.396649!10696-109G3;0.298315!10493-107B7;0.862727!10494-107B8;0.755235!10850-111F4;0.422907!10851-111F5;0.590989!10852-111F6;0.121499!10853-111F7;8.52763e-05!10854-111F8;0.978136!10855-111F9;0.490847!10856-111G1;0.0324408!10847-111F1;0.136858!10846-111E9;0.0254519!10848-111F2;0.134094!10845-111E8;0.266011!10857-111G2;0.920964!10858-111G3;0.838286!10156-103A3;0.959155!11901-125F2;0.438978!11902-125F3;0.23337!11903-125F4;0.188621!10689-109F5;0.148199!10648-109A9;0.265412!10784-110H1;0.391032!10744-110C6;0.998646!10772-110F7;0.409013!10474-106I6;0.468038!10600-108E6;0.566262!10684-109E9;0.0867173!12226-129F3;0.601945!12227-129F4;0.858503!10508-107D4;0.257062!10539-107G8;0.305147!10607-108F4;0.613542!10555-107I6;0.581339!10774-110F9;0.527321!10637-108I7;0.371944!10663-109C6;0.972977!10728-110A8;0.764331!10729-110A9;0.377397!10430-106D7;0.34578!10730-110B1;0.901442!10813-111B3;0.242895!10812-111B2;0.222732!10037-101F1;0.157165!10172-103C1;0.370471!10163-103B1;0.375349!10076-102A4;0.456449!10073-102A1;0.35199!10036-101E9;0.387466!10195-103E6;0.323401!10277-104E7;0.371921!10434-106E2;0.590444!10550-107I1;0.940638!10545-107H5;0.343081!10544-107H4;0.453665!10704-109H2;0.91655!10510-107D6;0.347041!10558-107I9;0.544194!10020-101D2;0.738785!10732-110B3;0.611705!10049-101G4;0.837417!10698-109G5;0.834786!10437-106E5;0.356734!10417-106C3;0.760424!10035-101E8;0.515566!10171-103B9;0.319064!10157-103A4;0.380612!10034-101E7;0.427123!10072-101I9;0.319731!10199-103F1;0.383118!10200-103F2;0.67412!10697-109G4;0.631566!10723-110A3;0.931814!10179-103C8;0.677198!10160-103A7;0.499867!10180-103C9;0.609283!10162-103A9;0.515692!10021-101D3;0.584441!10840-111E3;0.758881!10706-109H4;0.233973!10033-101E6;0.858376!10032-101E5;0.329403!10490-107B4;0.326616!10439-106E7;0.852201!10022-101D4;0.665398!10176-103C5;0.724531!10469-106I1;0.407426!10067-101I4;0.553284!10411-106B6;0.547451!10471-106I3;0.857379!10030-101E3;0.0424738!10475-106I7;0.401924!10787-110H4;0.752782!10477-106I9;0.809766!10695-109G2;0.249212!11771-123I7;0.258404!11772-123I8;0.930962!11773-123I9;0.676499!10093-102C3;0.638663!10442-106F1;0.641696!10442-106F1;0.785754!10201-103F3;0.849877!10639-108I9;0.435783!11843-124H7;0.523227!11841-124H5;0.449802!10693-109F9;0.39679!10436-106E4;0.286398!10483-107A6;0.926358!10282-104F3;0.626038!10023-101D5;0.997259!10066-101I3;0.9288!10065-101I2;0.58683!10800-110I8;0.704733!10610-108F7;0.341275!10841-111E4;0.490035!10541-107H1;0.309064!10842-111E5;0.584309!10562-108A4;0.568124!10024-101D6;0.0483504!10064-101I1;0.468507!10609-108F6;0.509232!10048-101G3;0.945032!10781-110G7;0.622034!10181-103D1;0.397403!10159-103A6;0.464602!10056-101H2;0.49384!10737-110B8;0.471822!10025-101D7;0.324505!10044-101F8;0.326309!10424-106D1;0.24319!10463-106H4;0.135819!10616-108G4;0.323161!10486-107A9;0.638371!10062-101H8;0.506724!10202-103F4;0.310515!10158-103A5;0.843103!10441-106E9;0.6298!10031-101E4;0.108241!10063-101H9;0.326913!10063-101H9;0.372907!11763-123H8;0.468484!11765-123I1;0.509256!11768-123I4;0.54751!10807-111A6;0.298!10790-110H7;0.66987!10798-110I6;0.985252!10786-110H3;0.646677!10591-108D6;0.847375!10593-108D8;0.80243!10590-108D5;0.95757!10026-101D8;0.382954!10096-102C6;0.611497!10168-103B6;0.306735!10154-103A1;0.439567!10209-103G2;0.538932!10061-101H7;0.79924!10027-101D9;0.622323!10043-101F7;0.250711!10783-110G9;0.167484!10028-101E1;0.565077!10060-101H6;0.752209!10203-103F5;0.58922!10059-101H5;0.999267!10047-101G2;0.633948!10029-101E2;0.939707!10058-101H4;0.846361!10418-106C4;0.66605!10492-107B6;0.746626!10694-109G1;0.316997!10797-110I5;0.174016!10057-101H3;0.867371!10100-102D1;0.595971!10055-101H1;0.70547!10204-103F6;0.714409!10191-103E2;0.645368!10563-108A5;0.932709
|name=motif843
|name=motif843
|tomtom_result=ZMS1#MA0441.1;0;0.000550801;0.262181;0.308742;6;TTCCCC;TTCCCCGCA;+!NFKB1#MA0105.1;5;0.000652919;0.310789;0.308742;6;TTCCCC;GGGGATTCCCC;+!MZF1_5-13#MA0057.1;0;0.00107125;0.509914;0.337703;6;TTCCCC;TTCCCCCTAC;-!USV1#MA0413.1;3;0.00222628;1.05971;0.378338;6;TTCCCC;AAATTCCCCCTGAATTTGTG;+!SPI1#MA0080.2;1;0.00227158;1.08127;0.378338;5;TTCCCC;CTTCCG;-!MZF1_1-4#MA0056.1;-1;0.0024003;1.14254;0.378338;5;TTCCCC;TCCCCA;-!TEC1#MA0406.1;3;0.00300237;1.42913;0.405632;5;TTCCCC;ACATTCCC;+!Su(H)#MA0085.1;7;0.00412495;1.96348;0.419072;6;TTCCCC;ATCTCGGTTCCCACAA;-!SPIB#MA0081.1;0;0.00422386;2.01056;0.419072;6;TTCCCC;TTCCTCT;-!NF-kappaB#MA0061.1;5;0.00489782;2.33136;0.419072;5;TTCCCC;GGAAATTCCC;-!GCR2#MA0305.1;2;0.00499522;2.37772;0.419072;5;TTCCCC;GCTTCCT;+!YPR196W#MA0437.1;2;0.00557052;2.65157;0.419072;6;TTCCCC;ATTTCTCCG;+!RELA#MA0107.1;5;0.00576057;2.74203;0.419072;5;TTCCCC;GGAAATTCCC;-!NHP10#MA0344.1;-1;0.00676527;3.22027;0.421732;5;TTCCCC;TCCCCGGC;-!znf143#MA0088.1;3;0.00811381;3.86217;0.43055;6;TTCCCC;GATTTCCCATAATGCCTTGC;+!MCM1#MA0331.1;0;0.00819463;3.90064;0.43055;6;TTCCCC;TTCCTAATTGGG;-!RDR1#MA0360.1;1;0.0117983;5.61601;0.587265;6;TTCCCC;GTTCCGCA;-!dl_1#MA0022.1;7;0.013814;6.57548;0.644496;5;TTCCCC;GGGGTTTTTCCC;+!REB1#MA0363.1;1;0.0148551;7.07102;0.644496;6;TTCCCC;GTTACCCGG;+!YDR026C#MA0421.1;1;0.0149926;7.13647;0.644496;6;TTCCCC;TTTACCCGGC;+!dl_2#MA0023.1;4;0.015832;7.53606;0.650992;6;TTCCCC;GGAAAACCCC;-!REL#MA0101.1;4;0.01679;7.99204;0.661616;6;TTCCCC;GGAAATCCCC;-!SPI1#MA0080.2;2;0.0175842;8.3701;0.665197;5;TTCCCC;ACTTCCT;-!NFATC2#MA0152.1;2;0.0184285;8.77198;0.670322;5;TTCCCC;TTTTCCA;+!PUT3#MA0358.1;0;0.0205822;9.79713;0.717637;6;TTCCCC;TTCCCGGG;-
}}
}}

Latest revision as of 12:33, 7 September 2012

Full Name: motif843

Motif matrix
POACGT
01000102202
02000102202
03010220200
04010220200
05010220200
06370076519500

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
ZMS1#MA0441.100.0005508010.2621810.3087426TTCCCCTTCCCCGCA+
NFKB1#MA0105.150.0006529190.3107890.3087426TTCCCCGGGGATTCCCC+
MZF1_5-13#MA0057.100.001071250.5099140.3377036TTCCCCTTCCCCCTAC-
USV1#MA0413.130.002226281.059710.3783386TTCCCCAAATTCCCCCTGAATTTGTG+
SPI1#MA0080.210.002271581.081270.3783385TTCCCCCTTCCG-
MZF1_1-4#MA0056.1-10.00240031.142540.3783385TTCCCCTCCCCA-
TEC1#MA0406.130.003002371.429130.4056325TTCCCCACATTCCC+
Su(H)#MA0085.170.004124951.963480.4190726TTCCCCATCTCGGTTCCCACAA-
SPIB#MA0081.100.004223862.010560.4190726TTCCCCTTCCTCT-
NF-kappaB#MA0061.150.004897822.331360.4190725TTCCCCGGAAATTCCC-
GCR2#MA0305.120.004995222.377720.4190725TTCCCCGCTTCCT+
YPR196W#MA0437.120.005570522.651570.4190726TTCCCCATTTCTCCG+
RELA#MA0107.150.005760572.742030.4190725TTCCCCGGAAATTCCC-
NHP10#MA0344.1-10.006765273.220270.4217325TTCCCCTCCCCGGC-
znf143#MA0088.130.008113813.862170.430556TTCCCCGATTTCCCATAATGCCTTGC+
MCM1#MA0331.100.008194633.900640.430556TTCCCCTTCCTAATTGGG-
RDR1#MA0360.110.01179835.616010.5872656TTCCCCGTTCCGCA-
dl_1#MA0022.170.0138146.575480.6444965TTCCCCGGGGTTTTTCCC+
REB1#MA0363.110.01485517.071020.6444966TTCCCCGTTACCCGG+
YDR026C#MA0421.110.01499267.136470.6444966TTCCCCTTTACCCGGC+
dl_2#MA0023.140.0158327.536060.6509926TTCCCCGGAAAACCCC-
REL#MA0101.140.016797.992040.6616166TTCCCCGGAAATCCCC-
SPI1#MA0080.220.01758428.37010.6651975TTCCCCACTTCCT-
NFATC2#MA0152.120.01842858.771980.6703225TTCCCCTTTTCCA+
PUT3#MA0358.100.02058229.797130.7176376TTCCCCTTCCCGGG-
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