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MacroAPE 1083:Motif TGNCAT: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;0;6656!02;0;0;6656;0!03;1664;1664;1664;1664!04;0;6656;0;0!05;6656;0;0;0!06;0;0;0;6656 |macroape_1083_sample_pvalues=11376-118A8;0.0805...")
 
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9-106D6;0.375416!10464-106H5;0.601756!10827-111C8;0.529197!10789-110H6;0.614919!10828-111C9;0.460608!10788-110H5;0.532872!10792-110H9;0.43268!10765-110E9;0.73242!10829-111D1;0.440776!10830-111D2;0.821944!10831-111D3;0.508939!10832-111D4;0.27557!10833-111D5;0.566026!10764-110E8;0.591834!10770-110F5;0.460491!10399-106A3;0.970973!10400-106A4;0.822753!10405-106A9;0.720368!10834-111D6;0.906598!10835-111D7;0.730942!10836-111D8;0.414854!10837-111D9;0.927249!10699-109G6;0.785233!10802-111A1;0.606343!10796-110I4;0.854604!10010-101C1;0.000649924!10810-111A9;0.0903631!10421-106C7;0.0781308!10708-109H6;0.327704!12235-129G3;0.133446!12236-129G4;0.982653!12237-129G5;0.89981!10167-103B5;0.934671!10151-102I7;0.0126029!10428-106D5;0.0164374!10795-110I3;0.0340153!10805-111A4;0.249091!10052-101G7;0.0352125!10189-103D9;0.237223!10589-108D4;0.0842814!10425-106D2;0.687984!10427-106D4;0.484789!10702-109G9;0.545374!10432-106D9;0.73684!10496-107C1;0.0104958!10718-109I7;0.044675!10011-101C2;0.481169!10053-101G8;0.137386!10686-109F2;0.272559!10084-102B3;0.148945!10012-101C3;0.0151893!10085-102B4;0.01954!10482-107A5;0.0141402!10419-106C5;0.462372!10080-102A8;0.153635!10760-110E4;0.561898!10709-109H7;0.00182784!10710-109H8;0.0190105!10703-109H1;0.0719607!10719-109I8;0.8753!10642-109A3;0.438436!10177-103C6;0.600313!10164-103B2;0.0157652!10173-103C2;0.0318266!10166-103B4;0.0169756!10083-102B2;0.0223819!10188-103D8;0.0106149!10552-107I3;0.0164297!10553-107I4;0.0600452!10013-101C4;0.2567!10536-107G5;0.350361!10618-108G6;0.446119!10423-106C9;0.00301014!10785-110H2;0.00158586!12238-129G6;0.00275562!12239-129G7;0.608258!12240-129G8;0.26731!10416-106C2;0.819444!10801-110I9;0.732928!10766-110F1;0.470022!10824-111C5;0.626535!10825-111C6;0.0890351!10826-111C7;0.0756256!10454-106G4;0.0903395!10409-106B4;0.105245!10638-108I8;0.826384!10636-108I6;0.0767911!10513-107D9;0.0189394!10420-106C6;0.0109636!10082-102B1;0.650463!10014-101C5;0.453327!10070-101I7;0.512726!10452-106G2;0.389273!10453-106G3;0.791616!10449-106F8;0.377208!10042-101F6;0.347856!10069-101I6;0.0188373!10193-103E4;0.143306!10631-108I1;0.0192189!10438-106E6;0.978236!10488-107B2;0.0573003!10196-103E7;0.139178!10071-101I8;0.135642!10071-101I8;0.436783!10041-101F5;0.0207662!10451-106G1;0.169507!10450-106F9;0.625096!10604-108F1;0.422421!10605-108F2;0.0322875!10606-108F3;0.0338533!10603-108E9;0.044288!10497-107C2;0.0185323!10448-106F7;0.00023369!10643-109A4;0.216323!10426-106D3;0.0130549!10431-106D8;0.00643255!10197-103E8;0.00796607!10443-106F2;0.0662204!10815-111B5;0.0457662!10816-111B6;0.0599141!10817-111B7;0.105599!10015-101C6;0.0651062!10410-106B5;0.537526!10054-101G9;0.344284!10758-110E2;0.194688!10711-109H9;0.116777!10040-101F4;0.049244!10470-106I2;0.013634!10415-106C1;0.0425025!10198-103E9;0.100435!10614-108G2;0.152466!10612-108F9;0.13333!10549-107H9;0.00754798!10615-108G3;0.127492!10487-107B1;0.907098!10433-106E1;0.201009!10688-109F4;0.150658!10444-106F3;0.150097!10444-106F3;0.498994!10485-107A8;0.423623!10413-106B8;0.087051!10175-103C4;0.323113!10161-103A8;0.0213216!12131-128D7;0.0210059!10624-108H3;0.914792!10712-109I1;0.147346!10205-103F7;0.394352!10206-103F8;0.0711352!10207-103F9;0.0731544!10050-101G5;0.0982186!10051-101G6;0.366638!10016-101C7;0.0626431!10046-101G1;0.0637316!10778-110G4;0.150846!10633-108I3;0.465384!10818-111B8;0.144069!10819-111B9;0.0111827!10820-111C1;0.0135967!10484-107A7;0.0114941!10808-111A7;0.387066!10169-103B7;0.332393!10153-102I9;0.0157248!13425-144D5;0.0237928!13433-144E4;0.0128866!13437-144E8;0.0159427!11904-125F5;0.00616754!11905-125F6;0.578165!10039-101F3;0.911356!10791-110H8;0.00964356!10017-101C8;0.0641623!10045-101F9;0.335705!10509-107D5;0.557985!10839-111E2;0.0668153!10692-109F8;0.376179!10079-102A7;0.0483934!10078-102A6;0.127807!10721-110A1;0.0920141!10569-108B2;0.236448!10570-108B3;0.523639!10571-108B4;0.775702!10647-109A8;0.601052!10752-110D5;0.237231!10782-110G8;0.276871!10726-110A6;0.583232!10018-101C9;0.0292447!10086-102B5;0.115934!10182-103D2;0.722425!10165-103B3;0.0384753!10499-107C4;0.0323249!10408-106B3;0.0879936!10019-101D1;0.000346885!10068-101I5;0.131475!10075-102A3;0.242554!10077-102A5;0.102328!10727-110A7;0.127907!10775-110G1;0.583607!10412-106B7;0.594803!12231-129F8;0.116056!12232-129F9;0.011266!12233-129G1;0.00625331!12234-129G2;0.0543816!10414-106B9;0.0206241!10170-103B8;0.142761!10183-103D3;0.0226069!10150-102I6;0.0204233!10174-103C3;0.0312388!10155-103A2;0.0400862!10038-101F2;0.0391166!10838-111E1;0.0253049!10759-110E3;0.739158!10514-107E1;0.0198449!10465-106H6;0.821019!10691-109F7;0.825066!10843-111E6;0.518965!10844-111E7;0.990154!11747-123G1;0.480894!11748-123G2;0.292608!11749-123G3;0.102477!11750-123G4;0.991715!11751-123G5;0.541352!11840-124H4;0.803263!11752-123G6;0.697811!11753-123G7;0.375684!11754-123G8;0.61419!11755-123G9;0.111874!11756-123H1;0.0644828!11833-124G6;0.146079!11760-123H5;0.616169!11836-124G9;0.108801!11758-123H3;0.77785!11835-124G8;0.876778!11762-123H7;0.956006!11838-124H2;0.594211!11757-123H2;0.6191!11759-123H4;0.505427!11761-123H6;0.27722!11842-124H6;0.0743865!11837-124H1;0.457039!10568-108B1;0.967631!13230-141I8;0.389267!13231-141I9;0.948763!10696-109G3;0.926795!10493-107B7;0.864825!10494-107B8;0.071517!10850-111F4;0.0100985!10851-111F5;0.0504116!10852-111F6;0.0714555!10853-111F7;0.168949!10854-111F8;0.00099742!10855-111F9;0.0280069!10856-111G1;0.129213!10847-111F1;0.0137065!10846-111E9;0.449296!10848-111F2;0.00714215!10845-111E8;0.000516242!10857-111G2;0.0220245!10858-111G3;0.078138!10156-103A3;0.0240029!11901-125F2;0.0255199!11902-125F3;0.825667!11903-125F4;0.988321!10689-109F5;0.936556!10648-109A9;0.615825!10784-110H1;0.00262305!10744-110C6;0.131598!10772-110F7;0.814011!10474-106I6;0.454743!10600-108E6;0.623518!10684-109E9;0.0549226!12226-129F3;0.944966!12227-129F4;0.119039!10508-107D4;0.230698!10539-107G8;0.262919!10607-108F4;0.262705!10555-107I6;0.254447!10774-110F9;0.307816!10637-108I7;0.25686!10663-109C6;0.33541!10728-110A8;0.133059!10729-110A9;0.25553!10430-106D7;0.331929!10730-110B1;0.297194!10813-111B3;0.68494!10812-111B2;0.390153!10037-101F1;0.853831!10172-103C1;0.0117511!10163-103B1;0.0380265!10076-102A4;0.0336735!10073-102A1;0.0121251!10036-101E9;0.0232799!10195-103E6;0.0192147!10277-104E7;0.0143253!10434-106E2;0.0124258!10550-107I1;0.0140225!10545-107H5;0.0296372!10544-107H4;0.00888628!10704-109H2;0.0498459!10510-107D6;0.9219!10558-107I9;0.358732!10020-101D2;0.838244!10732-110B3;0.16071!10049-101G4;0.501569!10698-109G5;0.642384!10437-106E5;0.00100097!10417-106C3;0.165568!10035-101E8;0.031819!10171-103B9;0.0168971!10157-103A4;0.0297483!10034-101E7;0.0304284!10072-101I9;0.0145863!10199-103F1;0.0386602!10200-103F2;0.595452!10697-109G4;0.145995!10723-110A3;0.503683!10179-103C8;0.00409839!10160-103A7;0.0371506!10180-103C9;0.0508107!10162-103A9;0.122221!10021-101D3;0.182618!10840-111E3;0.400992!10706-109H4;0.327934!10033-101E6;0.00713998!10032-101E5;0.0294639!10490-107B4;0.0144992!10439-106E7;0.0203493!10022-101D4;0.0154463!10176-103C5;0.149181!10469-106I1;0.018275!10067-101I4;0.208284!10411-106B6;0.376255!10471-106I3;0.0127755!10030-101E3;0.0260755!10475-106I7;0.127317!10787-110H4;0.860947!10477-106I9;0.13884!10695-109G2;0.355841!11771-123I7;0.866655!11772-123I8;0.058501!11773-123I9;0.237136!10093-102C3;0.33282!10442-106F1;0.937963!10442-106F1;0.495752!10201-103F3;0.620384!10639-108I9;0.145477!11843-124H7;0.167762!11841-124H5;0.117708!10693-109F9;0.00230695!10436-106E4;0.0905739!10483-107A6;0.0435513!10282-104F3;0.00366384!10023-101D5;0.197295!10066-101I3;0.163323!10065-101I2;0.837433!10800-110I8;0.516144!10610-108F7;0.941773!10841-111E4;0.421898!10541-107H1;0.93338!10842-111E5;0.379903!10562-108A4;0.906803!10024-101D6;0.615645!10064-101I1;0.520178!10609-108F6;0.736612!10048-101G3;0.757908!10781-110G7;0.0889993!10181-103D1;0.939467!10159-103A6;0.019841!10056-101H2;0.0545346!10737-110B8;0.108635!10025-101D7;0.311307!10044-101F8;0.209192!10424-106D1;0.158553!10463-106H4;0.334143!10616-108G4;0.00734343!10486-107A9;0.211869!10062-101H8;0.160453!10202-103F4;0.776308!10158-103A5;0.598383!10441-106E9;0.0345608!10031-101E4;0.877085!10063-101H9;0.0108534!10063-101H9;0.0370017!11763-123H8;0.193317!11765-123I1;0.904868!11768-123I4;0.991277!10807-111A6;0.83883!10790-110H7;0.078522!10798-110I6;0.108508!10786-110H3;0.447373!10591-108D6;0.0593674!10593-108D8;0.101663!10590-108D5;0.105227!10026-101D8;0.0176222!10096-102C6;0.0212662!10168-103B6;0.214802!10154-103A1;0.0182548!10209-103G2;0.0197137!10061-101H7;0.250282!10027-101D9;0.540076!10043-101F7;0.385345!10783-110G9;0.200593!10028-101E1;0.149401!10060-101H6;0.511966!10203-103F5;0.294199!10059-101H5;0.269373!10047-101G2;0.427536!10029-101E2;0.523258!10058-101H4;0.464575!10418-106C4;0.461786!10492-107B6;0.0298431!10694-109G1;0.035582!10797-110I5;0.340865!10057-101H3;0.107576!10100-102D1;0.570978!10055-101H1;0.230716!10204-103F6;0.770382!10191-103E2;0.204483!10563-108A5;0.0816131
|name=motif_TGNCAT
|name=motif_TGNCAT
|tomtom_result=hth#MA0227.1;0;0.00522574;2.48745;1;6;TGACAT;TGACAG;+!Hand1::Tcfe2a#MA0092.1;4;0.0110028;5.23732;1;6;TGACAT;GGTCTGGCAT;+!vis#MA0252.1;0;0.0125479;5.9728;1;6;TGACAT;TGACAG;+!slbo#MA0244.1;2;0.0127739;6.08037;1;6;TGACAT;TTTGCAAT;-!TOS8#MA0408.1;2;0.0127739;6.08037;1;6;TGACAT;TTTGACAG;-!achi#MA0207.1;1;0.0149288;7.10609;1;5;TGACAT;CTGTCA;-!CUP9#MA0288.1;0;0.0160695;7.6491;1;6;TGACAT;TGACACATT;+!NFE2L1::MafG#MA0089.1;-1;0.0176575;8.40497;1;5;TGACAT;GTCATG;-!CG11617#MA0173.1;1;0.0179366;8.5378;1;6;TGACAT;TTAACAT;+
}}
}}

Latest revision as of 12:43, 7 September 2012

Full Name: motif_TGNCAT

Motif matrix
POACGT
010006656
020066560
031664166416641664
040665600
056656000
060006656

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
hth#MA0227.100.005225742.4874516TGACATTGACAG+
Hand1::Tcfe2a#MA0092.140.01100285.2373216TGACATGGTCTGGCAT+
vis#MA0252.100.01254795.972816TGACATTGACAG+
slbo#MA0244.120.01277396.0803716TGACATTTTGCAAT-
TOS8#MA0408.120.01277396.0803716TGACATTTTGACAG-
achi#MA0207.110.01492887.1060915TGACATCTGTCA-
CUP9#MA0288.100.01606957.649116TGACATTGACACATT+
NFE2L1::MafG#MA0089.1-10.01765758.4049715TGACATGTCATG-
CG11617#MA0173.110.01793668.537816TGACATTTAACAT+
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