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MacroAPE 1083:CNhs12341 bl f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;72.61136496061069;180.78793435612857;213.72322341025486;174.42105865048643!2;122.1792356047912;198.98995110935286;81.07673406289729;239.2976...")
 
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-128I7;2.43145e-07!12177-128I8;2.95398e-07!12182-129A4;2.77137e-07!12183-129A5;1.26888e-07!12184-129A6;4.87263e-07!10809-111A8;2.40566e-06!10597-108E3;1.07162e-07!10717-109I6;0.00214112!10455-106G5;0.00565842!10534-107G3;0.293989!10429-106D6;0.00470056!10464-106H5;0.0526262!10827-111C8;0.00298544!10789-110H6;0.547617!10828-111C9;0.755273!10788-110H5;0.101681!10792-110H9;0.356227!10765-110E9;0.408452!10829-111D1;0.759461!10830-111D2;0.126162!10831-111D3;0.136916!10832-111D4;0.726213!10833-111D5;0.197245!10764-110E8;0.119719!10770-110F5;0.3613!10399-106A3;0.290859!10400-106A4;0.015854!10405-106A9;0.0104557!10834-111D6;0.0141648!10835-111D7;0.48206!10836-111D8;0.00206836!10837-111D9;0.00629374!10699-109G6;0.500661!10802-111A1;0.900631!10796-110I4;0.441229!10010-101C1;0.00107819!10810-111A9;2.79355e-05!10421-106C7;2.95504e-06!10708-109H6;0.256848!12235-129G3;3.36181e-06!12236-129G4;0.926026!12237-129G5;0.879786!10167-103B5;0.714199!10151-102I7;0.66113!10428-106D5;0.418112!10795-110I3;0.0734217!10805-111A4;0.0530826!10052-101G7;8.75556e-05!10189-103D9;3.6776e-06!10589-108D4;1.09841e-07!10425-106D2;5.08412e-05!10427-106D4;0.00246969!10702-109G9;0.4085!10432-106D9;0.157102!10496-107C1;0.00232189!10718-109I7;0.184499!10011-101C2;0.055046!10053-101G8;7.08676e-05!10686-109F2;6.38263e-05!10084-102B3;0.719034!10012-101C3;0.48157!10085-102B4;0.366668!10482-107A5;0.457289!10419-106C5;6.27515e-05!10080-102A8;0.0029443!10760-110E4;0.0091332!10709-109H7;0.00634146!10710-109H8;0.0171263!10703-109H1;0.00345179!10719-109I8;0.000397074!10642-109A3;1.07953e-05!10177-103C6;0.00201247!10164-103B2;0.439251!10173-103C2;0.483843!10166-103B4;0.871105!10083-102B2;0.789177!10188-103D8;0.956843!10552-107I3;0.311956!10553-107I4;0.0176601!10013-101C4;0.00543712!10536-107G5;2.73278e-05!10618-108G6;0.000142692!10423-106C9;0.00567004!10785-110H2;0.00966662!12238-129G6;4.65044e-05!12239-129G7;0.0759837!12240-129G8;0.408161!10416-106C2;0.0170514!10801-110I9;0.146919!10766-110F1;0.747421!10824-111C5;0.690962!10825-111C6;0.00445412!10826-111C7;0.0047069!10454-106G4;0.00916907!10409-106B4;0.0062159!10638-108I8;0.961965!10636-108I6;1.4733e-05!10513-107D9;0.0134746!10420-106C6;0.000624889!10082-102B1;0.000671479!10014-101C5;0.00426885!10070-101I7;7.83844e-05!10452-106G2;0.00167763!10453-106G3;0.0532325!10449-106F8;0.0198051!10042-101F6;0.0163093!10069-101I6;0.0322566!10193-103E4;0.0243745!10631-108I1;0.575702!10438-106E6;0.00999321!10488-107B2;0.118869!10196-103E7;1.94014e-05!10071-101I8;0.00543134!10071-101I8;0.00141899!10041-101F5;0.476872!10451-106G1;3.35444e-09!10450-106F9;4.89894e-09!10604-108F1;3.75049e-07!10605-108F2;0.023815!10606-108F3;0.00614092!10603-108E9;0.0279289!10497-107C2;0.00317748!10448-106F7;0.101726!10643-109A4;0.0149922!10426-106D3;0.00283687!10431-106D8;0.0177124!10197-103E8;0.0195328!10443-106F2;0.00026876!10815-111B5;0.00898125!10816-111B6;0.00103836!10817-111B7;0.00239777!10015-101C6;0.00100003!10410-106B5;0.00086975!10054-101G9;0.00183173!10758-110E2;0.0657106!10711-109H9;0.131613!10040-101F4;0.00443277!10470-106I2;0.659496!10415-106C1;0.00234642!10198-103E9;0.586224!10614-108G2;2.53685e-06!10612-108F9;7.06797e-08!10549-107H9;0.000100965!10615-108G3;5.87569e-06!10487-107B1;0.0030314!10433-106E1;0.0213505!10688-109F4;0.0149189!10444-106F3;0.0783921!10444-106F3;0.0110413!10485-107A8;0.0206519!10413-106B8;3.61045e-05!10175-103C4;0.220485!10161-103A8;0.336655!12131-128D7;0.0929364!10624-108H3;0.373334!10712-109I1;0.0441195!10205-103F7;0.430498!10206-103F8;0.000177215!10207-103F9;0.000188938!10050-101G5;0.000331329!10051-101G6;0.0125302!10016-101C7;0.00203823!10046-101G1;0.00127849!10778-110G4;0.00641263!10633-108I3;0.0012658!10818-111B8;0.0128903!10819-111B9;0.00591753!10820-111C1;0.00599362!10484-107A7;0.00647556!10808-111A7;7.08373e-05!10169-103B7;0.0523677!10153-102I9;0.610249!13425-144D5;0.275448!13433-144E4;4.32701e-05!13437-144E8;5.12982e-05!11904-125F5;0.000304395!11905-125F6;0.235444!10039-101F3;0.360844!10791-110H8;0.570755!10017-101C8;0.00216499!10045-101F9;0.00241342!10509-107D5;0.0274361!10839-111E2;0.0991761!10692-109F8;0.01257!10079-102A7;0.000662988!10078-102A6;1.46526e-05!10721-110A1;0.00249255!10569-108B2;0.000171989!10570-108B3;0.734432!10571-108B4;0.76923!10647-109A8;0.83979!10752-110D5;0.000205564!10782-110G8;0.125318!10726-110A6;0.320958!10018-101C9;0.0121611!10086-102B5;0.0113043!10182-103D2;0.0840787!10165-103B3;0.27761!10499-107C4;0.10479!10408-106B3;0.0948661!10019-101D1;0.853039!10068-101I5;5.05008e-06!10075-102A3;2.25531e-07!10077-102A5;3.15903e-06!10727-110A7;1.12145e-06!10775-110G1;0.214501!10412-106B7;0.333445!12231-129F8;0.485325!12232-129F9;0.616621!12233-129G1;0.256311!12234-129G2;0.397036!10414-106B9;0.831037!10170-103B8;0.00554129!10183-103D3;0.891287!10150-102I6;0.792121!10174-103C3;0.434274!10155-103A2;0.0635423!10038-101F2;0.0277065!10838-111E1;0.0185171!10759-110E3;0.000139373!10514-107E1;0.000232413!10465-106H6;0.0960485!10691-109F7;0.0231779!10843-111E6;0.193065!10844-111E7;7.65337e-05!11747-123G1;0.00389868!11748-123G2;0.976089!11749-123G3;0.484574!11750-123G4;0.897729!11751-123G5;0.333329!11840-124H4;0.765891!11752-123G6;0.747687!11753-123G7;0.865686!11754-123G8;0.776147!11755-123G9;0.566363!11756-123H1;0.97762!11833-124G6;0.605055!11760-123H5;0.155889!11836-124G9;0.75894!11758-123H3;0.415274!11835-124G8;0.379756!11762-123H7;0.112155!11838-124H2;0.151948!11757-123H2;0.339491!11759-123H4;0.84482!11761-123H6;0.638164!11842-124H6;0.598197!11837-124H1;0.291669!10568-108B1;0.141771!13230-141I8;0.514634!13231-141I9;0.206548!10696-109G3;0.217872!10493-107B7;0.912618!10494-107B8;0.00146346!10850-111F4;0.0343712!10851-111F5;7.74761e-05!10852-111F6;0.00124316!10853-111F7;0.00302531!10854-111F8;2.07814e-07!10855-111F9;0.000248422!10856-111G1;0.427082!10847-111F1;1.40939e-05!10846-111E9;6.9287e-06!10848-111F2;9.80554e-05!10845-111E8;3.24751e-05!10857-111G2;0.00020861!10858-111G3;0.00145537!10156-103A3;0.000106395!11901-125F2;0.485409!11902-125F3;0.739246!11903-125F4;0.904345!10689-109F5;0.51275!10648-109A9;0.000794572!10784-110H1;3.38736e-08!10744-110C6;0.0137997!10772-110F7;0.469269!10474-106I6;0.0446758!10600-108E6;0.404283!10684-109E9;0.020487!12226-129F3;0.0111197!12227-129F4;0.0448508!10508-107D4;0.234678!10539-107G8;0.00088514!10607-108F4;0.000270347!10555-107I6;3.90604e-06!10774-110F9;3.76138e-05!10637-108I7;2.77209e-05!10663-109C6;0.000523889!10728-110A8;3.47211e-06!10729-110A9;0.000246566!10430-106D7;0.276995!10730-110B1;0.00662662!10813-111B3;7.48131e-05!10812-111B2;0.229625!10037-101F1;0.943596!10172-103C1;0.501242!10163-103B1;0.829942!10076-102A4;0.365602!10073-102A1;0.907184!10036-101E9;0.292012!10195-103E6;0.737747!10277-104E7;0.499001!10434-106E2;0.240932!10550-107I1;0.0186987!10545-107H5;4.9877e-05!10544-107H4;0.0275995!10704-109H2;0.00219933!10510-107D6;0.754084!10558-107I9;0.01248!10020-101D2;0.00326361!10732-110B3;0.000240623!10049-101G4;0.0153879!10698-109G5;0.226294!10437-106E5;0.00365284!10417-106C3;0.0832302!10035-101E8;0.294341!10171-103B9;0.663499!10157-103A4;0.862459!10034-101E7;0.475237!10072-101I9;0.57991!10199-103F1;0.308619!10200-103F2;0.00674495!10697-109G4;0.000664746!10723-110A3;0.143056!10179-103C8;0.05017!10160-103A7;0.901016!10180-103C9;0.752961!10162-103A9;0.573613!10021-101D3;0.469585!10840-111E3;0.000625014!10706-109H4;0.214122!10033-101E6;0.81266!10032-101E5;0.21228!10490-107B4;0.736019!10439-106E7;0.000152755!10022-101D4;2.40213e-05!10176-103C5;0.000525253!10469-106I1;0.710937!10067-101I4;0.00216664!10411-106B6;0.112811!10471-106I3;0.01647!10030-101E3;0.00389228!10475-106I7;0.006321!10787-110H4;0.000174359!10477-106I9;1.99898e-05!10695-109G2;0.00635148!11771-123I7;0.70956!11772-123I8;0.0190778!11773-123I9;0.074698!10093-102C3;0.466502!10442-106F1;0.000447457!10442-106F1;0.0236585!10201-103F3;0.045318!10639-108I9;0.000370134!11843-124H7;0.00819818!11841-124H5;0.000102587!10693-109F9;4.50567e-11!10436-106E4;0.00647522!10483-107A6;0.0394204!10282-104F3;0.0619106!10023-101D5;0.32894!10066-101I3;0.0770346!10065-101I2;0.0942219!10800-110I8;0.00757027!10610-108F7;0.000220638!10841-111E4;0.0110914!10541-107H1;1.7866e-06!10842-111E5;0.00202351!10562-108A4;8.263e-05!10024-101D6;0.0155506!10064-101I1;6.56504e-05!10609-108F6;0.0087639!10048-101G3;0.0114285!10781-110G7;0.00298934!10181-103D1;0.000357392!10159-103A6;0.0206456!10056-101H2;0.0129104!10737-110B8;0.191323!10025-101D7;0.335133!10044-101F8;4.06996e-10!10424-106D1;9.627e-09!10463-106H4;0.058241!10616-108G4;0.0384332!10486-107A9;0.0444732!10062-101H8;0.008731!10202-103F4;0.00437212!10158-103A5;0.000344164!10441-106E9;0.016227!10031-101E4;0.000159048!10063-101H9;0.540182!10063-101H9;0.350972!11763-123H8;0.000163683!11765-123I1;0.400136!11768-123I4;0.284145!10807-111A6;0.556702!10790-110H7;0.000406746!10798-110I6;3.49467e-07!10786-110H3;1.71579e-07!10591-108D6;0.000161075!10593-108D8;0.000126775!10590-108D5;0.000335751!10026-101D8;0.000139413!10096-102C6;0.165561!10168-103B6;0.077378!10154-103A1;0.279093!10209-103G2;0.121389!10061-101H7;0.000719261!10027-101D9;0.0113528!10043-101F7;0.048365!10783-110G9;0.000252346!10028-101E1;0.000993867!10060-101H6;0.0896278!10203-103F5;0.0341269!10059-101H5;0.000819638!10047-101G2;0.0261425!10029-101E2;4.98897e-06!10058-101H4;2.00165e-06!10418-106C4;0.00135322!10492-107B6;0.00161994!10694-109G1;0.0340792!10797-110I5;0.672069!10057-101H3;0.0003639!10100-102D1;7.66781e-05!10055-101H1;9.29824e-05!10204-103F6;0.0856993!10191-103E2;0.00533672!10563-108A5;1.11e-06
|name=CNhs12341_bl_f2
|name=CNhs12341_bl_f2
|tomtom_result=YJL103C#MA0427.1;0;0.000322063;0.153302;0.306604;11;GTACAGGAGCAA;TCTCCGGAGCT;-!REI1#MA0364.1;-2;0.00369874;1.7606;0.847903;7;GTACAGGAGCAA;TCAGGGG;-!USV1#MA0413.1;5;0.00379778;1.80774;0.847903;12;GTACAGGAGCAA;CACAAATTCAGGGGGAATTT;-!ELF5#MA0136.1;-3;0.00519518;2.4729;0.847903;9;GTACAGGAGCAA;AAGGAAGTA;-!SPIB#MA0081.1;-2;0.00550928;2.62242;0.847903;7;GTACAGGAGCAA;AGAGGAA;+!odd#MA0454.1;-1;0.00623458;2.96766;0.847903;11;GTACAGGAGCAA;AACAGTAGCAG;+!Stat3#MA0144.1;0;0.00844475;4.0197;0.902241;10;GTACAGGAGCAA;TTCCAGGAAG;+!RGM1#MA0366.1;-4;0.00929075;4.42239;0.902241;5;GTACAGGAGCAA;AGGGG;+!RME1#MA0370.1;1;0.00947732;4.51121;0.902241;9;GTACAGGAGCAA;TCCAAAGGAA;+!GIS1#MA0306.1;-1;0.0125695;5.98309;0.92908;9;GTACAGGAGCAA;TTTAGGGGT;-!FEV#MA0156.1;-3;0.012831;6.10754;0.92908;8;GTACAGGAGCAA;CAGGAAAT;+!GSM1#MA0308.1;8;0.0136945;6.51859;0.92908;12;GTACAGGAGCAA;ATTAAAAAACTCCGGAGTATA;+!ELK1#MA0028.1;0;0.0140161;6.67166;0.92908;10;GTACAGGAGCAA;GAGCCGGAAG;+!MSN4#MA0342.1;-4;0.0146798;6.98757;0.92908;5;GTACAGGAGCAA;AGGGG;+!YER130C#MA0423.1;-1;0.0165274;7.86704;0.92908;9;GTACAGGAGCAA;AATAGGGGT;-!Eip74EF#MA0026.1;-3;0.0170328;8.1076;0.92908;7;GTACAGGAGCAA;CCGGAAG;+!sna#MA0086.1;-3;0.0185426;8.82626;0.92908;6;GTACAGGAGCAA;CAGGTG;+!CAT8#MA0280.1;-3;0.0185426;8.82626;0.92908;6;GTACAGGAGCAA;CCGGAA;+
}}
}}

Latest revision as of 12:46, 7 September 2012

Full Name: CNhs12341_bl_f2

Motif matrix
POACGT
172.61136496061069180.78793435612857213.72322341025486174.42105865048643
2122.1792356047912198.9899511093528681.07673406289729239.29766060043943
3253.46997372077908208.9384848284732454.43779371285589124.69732911537234
422.550074528247954412.17583500006725189.80993397068817.007737878477318
5635.87600869726361.69528867259819731.69528867259819732.2769953350204486
61.35384369748362740.0640.18973767999670.0
70.160222470337630870.16022247033763087641.06291396646750.16022247033763087
8393.081535290202227.803359311602208199.4530805101119321.205606265563944
9212.7147908554918678.93609180571309321.524447824218728.368250892056746
10130.6974984114492243.13402807409838187.3502510288590280.36180386307407
11270.7635912240398174.857799074357168.66752662943728127.25466444964641
12209.73702450779848141.3935236072643484.21394502667727206.19908823574028

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
YJL103C#MA0427.100.0003220630.1533020.30660411GTACAGGAGCAATCTCCGGAGCT-
REI1#MA0364.1-20.003698741.76060.8479037GTACAGGAGCAATCAGGGG-
USV1#MA0413.150.003797781.807740.84790312GTACAGGAGCAACACAAATTCAGGGGGAATTT-
ELF5#MA0136.1-30.005195182.47290.8479039GTACAGGAGCAAAAGGAAGTA-
SPIB#MA0081.1-20.005509282.622420.8479037GTACAGGAGCAAAGAGGAA+
odd#MA0454.1-10.006234582.967660.84790311GTACAGGAGCAAAACAGTAGCAG+
Stat3#MA0144.100.008444754.01970.90224110GTACAGGAGCAATTCCAGGAAG+
RGM1#MA0366.1-40.009290754.422390.9022415GTACAGGAGCAAAGGGG+
RME1#MA0370.110.009477324.511210.9022419GTACAGGAGCAATCCAAAGGAA+
GIS1#MA0306.1-10.01256955.983090.929089GTACAGGAGCAATTTAGGGGT-
FEV#MA0156.1-30.0128316.107540.929088GTACAGGAGCAACAGGAAAT+
GSM1#MA0308.180.01369456.518590.9290812GTACAGGAGCAAATTAAAAAACTCCGGAGTATA+
ELK1#MA0028.100.01401616.671660.9290810GTACAGGAGCAAGAGCCGGAAG+
MSN4#MA0342.1-40.01467986.987570.929085GTACAGGAGCAAAGGGG+
YER130C#MA0423.1-10.01652747.867040.929089GTACAGGAGCAAAATAGGGGT-
Eip74EF#MA0026.1-30.01703288.10760.929087GTACAGGAGCAACCGGAAG+
sna#MA0086.1-30.01854268.826260.929086GTACAGGAGCAACAGGTG+
CAT8#MA0280.1-30.01854268.826260.929086GTACAGGAGCAACCGGAA+
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