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MacroAPE 1083:CNhs12040 bu f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;152.18258385688432;137.44121153987254;37.25806275240831;40.703507554809015!2;153.59480275086975;150.17515727481765;57.07596590840345;6.73943...")
 
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42!10455-106G5;0.217192!10534-107G3;0.00385491!10429-106D6;0.023736!10464-106H5;0.06831!10827-111C8;0.0309202!10789-110H6;0.000225053!10828-111C9;0.00859126!10788-110H5;0.0163467!10792-110H9;0.0204134!10765-110E9;0.00154907!10829-111D1;0.00506072!10830-111D2;0.00270683!10831-111D3;0.0367471!10832-111D4;0.00813587!10833-111D5;0.00173904!10764-110E8;0.000706427!10770-110F5;0.00373466!10399-106A3;0.000795975!10400-106A4;0.00410069!10405-106A9;0.00657816!10834-111D6;0.00612621!10835-111D7;0.00061079!10836-111D8;0.0187125!10837-111D9;0.213969!10699-109G6;0.0160734!10802-111A1;0.0210463!10796-110I4;0.0400725!10010-101C1;0.0259113!10810-111A9;0.0336115!10421-106C7;0.0860247!10708-109H6;0.0130521!12235-129G3;0.195476!12236-129G4;0.780089!12237-129G5;0.474743!10167-103B5;0.329528!10151-102I7;0.0271665!10428-106D5;0.0205996!10795-110I3;0.902359!10805-111A4;0.00756267!10052-101G7;0.594887!10189-103D9;0.010224!10589-108D4;0.0298264!10425-106D2;0.28859!10427-106D4;0.485676!10702-109G9;0.0134701!10432-106D9;0.429438!10496-107C1;0.0666596!10718-109I7;0.10921!10011-101C2;0.00359399!10053-101G8;0.0125373!10686-109F2;0.332959!10084-102B3;0.929094!10012-101C3;0.0202727!10085-102B4;0.0270661!10482-107A5;0.011592!10419-106C5;0.661545!10080-102A8;0.155807!10760-110E4;0.0134707!10709-109H7;0.0699837!10710-109H8;0.0609409!10703-109H1;0.052793!10719-109I8;0.957954!10642-109A3;0.316783!10177-103C6;0.576032!10164-103B2;0.0122408!10173-103C2;0.0211729!10166-103B4;0.0155908!10083-102B2;0.0134744!10188-103D8;0.00934218!10552-107I3;0.0169466!10553-107I4;0.0132306!10013-101C4;0.796606!10536-107G5;0.0218136!10618-108G6;0.403688!10423-106C9;0.227892!10785-110H2;0.122442!12238-129G6;0.323112!12239-129G7;0.388634!12240-129G8;0.0510898!10416-106C2;0.671313!10801-110I9;0.000959988!10766-110F1;0.00500301!10824-111C5;0.0236731!10825-111C6;0.0403405!10826-111C7;0.0562741!10454-106G4;0.0609596!10409-106B4;0.0188223!10638-108I8;0.0121622!10636-108I6;0.0595059!10513-107D9;0.0193709!10420-106C6;0.150451!10082-102B1;0.104343!10014-101C5;0.0353379!10070-101I7;0.013558!10452-106G2;0.0204812!10453-106G3;0.518102!10449-106F8;0.195281!10042-101F6;0.188978!10069-101I6;0.00325976!10193-103E4;0.0468358!10631-108I1;0.0154019!10438-106E6;0.0031999!10488-107B2;0.190918!10196-103E7;0.0348195!10071-101I8;0.0336414!10071-101I8;0.00848335!10041-101F5;0.0287152!10451-106G1;0.0356465!10450-106F9;0.175313!10604-108F1;0.207906!10605-108F2;0.602763!10606-108F3;0.389098!10603-108E9;0.671516!10497-107C2;0.543891!10448-106F7;0.0647038!10643-109A4;0.284534!10426-106D3;0.0166859!10431-106D8;0.399142!10197-103E8;0.146788!10443-106F2;0.0696773!10815-111B5;0.158508!10816-111B6;0.0293944!10817-111B7;0.0682559!10015-101C6;0.0368269!10410-106B5;0.00917007!10054-101G9;0.45199!10758-110E2;0.00665624!10711-109H9;0.27561!10040-101F4;0.147475!10470-106I2;0.0300045!10415-106C1;0.363921!10198-103E9;0.45971!10614-108G2;0.005749!10612-108F9;0.379701!10549-107H9;0.13488!10615-108G3;0.223996!10487-107B1;0.369529!10433-106E1;0.0355012!10688-109F4;0.482583!10444-106F3;0.181596!10444-106F3;0.474995!10485-107A8;0.542326!10413-106B8;0.273591!10175-103C4;0.256434!10161-103A8;0.00530767!12131-128D7;0.0065586!10624-108H3;0.30263!10712-109I1;0.897168!10205-103F7;0.0608964!10206-103F8;0.0271254!10207-103F9;0.0324794!10050-101G5;0.0227078!10051-101G6;0.0623808!10016-101C7;0.0823123!10046-101G1;0.062495!10778-110G4;0.0151757!10633-108I3;0.308256!10818-111B8;0.683341!10819-111B9;0.0694829!10820-111C1;0.066566!10484-107A7;0.0751778!10808-111A7;0.575541!10169-103B7;0.00256077!10153-102I9;0.00821021!13425-144D5;0.00924609!13433-144E4;0.758406!13437-144E8;0.585969!11904-125F5;0.511943!11905-125F6;0.514173!10039-101F3;0.597659!10791-110H8;0.0242901!10017-101C8;0.0499853!10045-101F9;0.0464465!10509-107D5;0.000479318!10839-111E2;0.196211!10692-109F8;0.111429!10079-102A7;0.408084!10078-102A6;0.095117!10721-110A1;0.137397!10569-108B2;0.183637!10570-108B3;0.258403!10571-108B4;0.430695!10647-109A8;0.233248!10752-110D5;0.918559!10782-110G8;0.0569905!10726-110A6;0.867796!10018-101C9;0.385265!10086-102B5;0.485826!10182-103D2;0.291296!10165-103B3;0.00547334!10499-107C4;0.0123504!10408-106B3;0.0815712!10019-101D1;0.162027!10068-101I5;0.0416719!10075-102A3;0.0136711!10077-102A5;0.11027!10727-110A7;0.596122!10775-110G1;0.00743643!10412-106B7;0.00381599!12231-129F8;0.35036!12232-129F9;0.00817271!12233-129G1;0.0156463!12234-129G2;0.0746234!10414-106B9;0.0828339!10170-103B8;0.220712!10183-103D3;0.0401588!10150-102I6;0.0373393!10174-103C3;0.0233642!10155-103A2;0.00904159!10038-101F2;0.00902316!10838-111E1;0.00402804!10759-110E3;0.972158!10514-107E1;0.508659!10465-106H6;0.158034!10691-109F7;0.781211!10843-111E6;0.357531!10844-111E7;0.801991!11747-123G1;0.653869!11748-123G2;0.433461!11749-123G3;0.956908!11750-123G4;0.413271!11751-123G5;0.350091!11840-124H4;0.277215!11752-123G6;0.283622!11753-123G7;0.444349!11754-123G8;0.375932!11755-123G9;0.677007!11756-123H1;0.423086!11833-124G6;0.0746846!11760-123H5;0.697185!11836-124G9;0.408935!11758-123H3;0.394183!11835-124G8;0.321922!11762-123H7;0.295419!11838-124H2;0.546493!11757-123H2;0.966138!11759-123H4;0.0681512!11761-123H6;0.624297!11842-124H6;0.530887!11837-124H1;0.888519!10568-108B1;0.291581!13230-141I8;0.295701!13231-141I9;0.237315!10696-109G3;0.155154!10493-107B7;0.00785211!10494-107B8;0.101217!10850-111F4;0.960085!10851-111F5;0.155148!10852-111F6;0.287158!10853-111F7;0.360054!10854-111F8;0.118483!10855-111F9;0.580729!10856-111G1;0.815887!10847-111F1;0.817503!10846-111E9;0.610077!10848-111F2;0.523427!10845-111E8;0.0867677!10857-111G2;0.0485544!10858-111G3;0.114818!10156-103A3;0.0432674!11901-125F2;0.0228515!11902-125F3;0.423953!11903-125F4;0.331152!10689-109F5;0.4317!10648-109A9;0.168946!10784-110H1;0.202049!10744-110C6;0.201998!10772-110F7;0.00999512!10474-106I6;0.00634578!10600-108E6;0.00203145!10684-109E9;0.999635!12226-129F3;0.614237!12227-129F4;0.0226592!10508-107D4;0.0551092!10539-107G8;0.851432!10607-108F4;0.452579!10555-107I6;0.268278!10774-110F9;0.474602!10637-108I7;0.0179698!10663-109C6;0.961983!10728-110A8;0.337023!10729-110A9;0.544343!10430-106D7;0.405539!10730-110B1;0.0579192!10813-111B3;0.644785!10812-111B2;0.0530017!10037-101F1;0.263175!10172-103C1;0.0207053!10163-103B1;0.0359102!10076-102A4;0.0157926!10073-102A1;0.0354878!10036-101E9;0.0478772!10195-103E6;0.0192074!10277-104E7;0.0248003!10434-106E2;0.00808273!10550-107I1;0.141157!10545-107H5;0.0926167!10544-107H4;0.139867!10704-109H2;0.163438!10510-107D6;0.322007!10558-107I9;0.752686!10020-101D2;0.477926!10732-110B3;0.0127951!10049-101G4;0.893278!10698-109G5;0.591618!10437-106E5;0.227169!10417-106C3;0.0311986!10035-101E8;0.185818!10171-103B9;0.0248373!10157-103A4;0.0370336!10034-101E7;0.0230955!10072-101I9;0.0212946!10199-103F1;0.0396567!10200-103F2;0.0976323!10697-109G4;0.0413803!10723-110A3;0.939647!10179-103C8;0.0812988!10160-103A7;0.00424717!10180-103C9;0.00747815!10162-103A9;0.257889!10021-101D3;0.152363!10840-111E3;0.0671982!10706-109H4;0.00472683!10033-101E6;0.248671!10032-101E5;0.0204777!10490-107B4;0.0245967!10439-106E7;0.0622445!10022-101D4;0.191796!10176-103C5;0.00934776!10469-106I1;0.0263327!10067-101I4;0.459539!10411-106B6;0.00434784!10471-106I3;0.513043!10030-101E3;0.00363244!10475-106I7;0.0034979!10787-110H4;0.668272!10477-106I9;0.219055!10695-109G2;0.885975!11771-123I7;0.00071259!11772-123I8;0.0218623!11773-123I9;0.500298!10093-102C3;0.0635558!10442-106F1;0.0355625!10442-106F1;0.0733214!10201-103F3;0.0874456!10639-108I9;0.0791096!11843-124H7;0.108826!11841-124H5;0.0763673!10693-109F9;0.0236759!10436-106E4;0.0620754!10483-107A6;0.148186!10282-104F3;0.106477!10023-101D5;0.290511!10066-101I3;0.0889323!10065-101I2;0.107694!10800-110I8;0.0373649!10610-108F7;0.739101!10841-111E4;0.441314!10541-107H1;0.352666!10842-111E5;0.353263!10562-108A4;0.890633!10024-101D6;0.668977!10064-101I1;0.0152357!10609-108F6;0.0063468!10048-101G3;0.669425!10781-110G7;0.00703617!10181-103D1;0.930297!10159-103A6;0.00619609!10056-101H2;0.00967009!10737-110B8;0.0097636!10025-101D7;0.355282!10044-101F8;0.480311!10424-106D1;0.0807786!10463-106H4;0.00641613!10616-108G4;0.318293!10486-107A9;0.123938!10062-101H8;0.0305636!10202-103F4;0.000849831!10158-103A5;0.0501316!10441-106E9;0.0117581!10031-101E4;0.767762!10063-101H9;0.0175644!10063-101H9;0.030237!11763-123H8;0.019858!11765-123I1;0.147617!11768-123I4;0.106899!10807-111A6;0.262658!10790-110H7;0.488694!10798-110I6;0.379216!10786-110H3;0.65878!10591-108D6;0.99397!10593-108D8;0.906947!10590-108D5;0.56663!10026-101D8;0.380008!10096-102C6;0.0733298!10168-103B6;0.951639!10154-103A1;0.0122235!10209-103G2;0.0103602!10061-101H7;0.0675724!10027-101D9;0.0579603!10043-101F7;0.0310261!10783-110G9;0.49677!10028-101E1;0.0558563!10060-101H6;0.0481418!10203-103F5;0.0311516!10059-101H5;0.0654648!10047-101G2;0.0425381!10029-101E2;0.0666702!10058-101H4;0.0239765!10418-106C4;0.0214596!10492-107B6;0.519102!10694-109G1;0.12756!10797-110I5;0.0326101!10057-101H3;0.251168!10100-102D1;0.0504732!10055-101H1;0.0110976!10204-103F6;0.0201616!10191-103E2;0.00637424!10563-108A5;0.0709666
|name=CNhs12040_bu_f2
|name=CNhs12040_bu_f2
|tomtom_result=ECM23#MA0293.1;0;0.00465702;2.21674;1;9;AAAGAGCCC;AAAGATCTAAA;+!CRZ1#MA0285.1;-1;0.00616253;2.93337;1;8;AAAGAGCCC;CTAAGCCAC;+!Trl#MA0205.1;1;0.00714228;3.39973;1;9;AAAGAGCCC;GAGAGAGCAA;-!GAT4#MA0302.1;0;0.0109642;5.21894;1;9;AAAGAGCCC;AAAGATCTAAA;+!HAP5#MA0316.1;5;0.0148767;7.0813;1;9;AAAGAGCCC;ACCAATCAGATCCCA;-!GAL4#MA0299.1;4;0.0168288;8.01052;1;9;AAAGAGCCC;CGGGGAACAGTACTC;+!Dof2#MA0020.1;-2;0.0180015;8.56869;1;6;AAAGAGCCC;AAAGCA;+
}}
}}

Latest revision as of 12:51, 7 September 2012

Full Name: CNhs12040_bu_f2

Motif matrix
POACGT
1152.18258385688432137.4412115398725437.2580627524083140.703507554809015
2153.59480275086975150.1751572748176557.075965908403456.739439769883235
3266.39463223001396.20572335074246351.0894811819247843.895528941292866
41.53455077704696771.5345507770469677362.98171337283281.5345507770469677
5367.585365703973760.00.00.0
61.4621336453534711.462133645353471363.19896476791331.462133645353471
74.096863197462978221.510611385714884.9104712680522657.06741985274403
819.773408361119877186.0261653031113683.0782334426962378.7075585970465
954.17716322076982157.7597469697330251.853986582421264103.79446893105005

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
ECM23#MA0293.100.004657022.2167419AAAGAGCCCAAAGATCTAAA+
CRZ1#MA0285.1-10.006162532.9333718AAAGAGCCCCTAAGCCAC+
Trl#MA0205.110.007142283.3997319AAAGAGCCCGAGAGAGCAA-
GAT4#MA0302.100.01096425.2189419AAAGAGCCCAAAGATCTAAA+
HAP5#MA0316.150.01487677.081319AAAGAGCCCACCAATCAGATCCCA-
GAL4#MA0299.140.01682888.0105219AAAGAGCCCCGGGGAACAGTACTC+
Dof2#MA0020.1-20.01800158.5686916AAAGAGCCCAAAGCA+
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