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MacroAPE 1083:Motif TGAANC: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;0;11520!02;0;0;11520;0!03;11520;0;0;0!04;11520;0;0;0!05;2880;2880;2880;2880!06;0;11520;0;0 |macroape_1083_sample_pvalues=11376-118A8;0...")
 
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10828-111C9;0.323571!10788-110H5;0.277961!10792-110H9;0.66192!10765-110E9;0.499305!10829-111D1;0.252378!10830-111D2;0.473478!10831-111D3;0.963776!10832-111D4;0.259965!10833-111D5;0.0872942!10764-110E8;0.109687!10770-110F5;0.362242!10399-106A3;0.282959!10400-106A4;0.1564!10405-106A9;0.18966!10834-111D6;0.19801!10835-111D7;0.537909!10836-111D8;0.15244!10837-111D9;0.278052!10699-109G6;0.385397!10802-111A1;0.502423!10796-110I4;0.142099!10010-101C1;0.879088!10810-111A9;0.600903!10421-106C7;0.350959!10708-109H6;0.0557477!12235-129G3;0.677504!12236-129G4;0.511454!12237-129G5;0.966785!10167-103B5;0.517276!10151-102I7;0.702149!10428-106D5;0.899765!10795-110I3;0.106118!10805-111A4;0.392389!10052-101G7;0.686151!10189-103D9;0.923485!10589-108D4;0.493149!10425-106D2;0.547976!10427-106D4;0.599037!10702-109G9;0.172136!10432-106D9;0.424245!10496-107C1;0.354297!10718-109I7;0.854543!10011-101C2;0.178876!10053-101G8;0.613073!10686-109F2;0.866817!10084-102B3;0.88108!10012-101C3;0.737108!10085-102B4;0.988884!10482-107A5;0.876702!10419-106C5;0.501713!10080-102A8;0.530112!10760-110E4;0.309368!10709-109H7;0.867284!10710-109H8;0.453393!10703-109H1;0.921969!10719-109I8;0.787586!10642-109A3;0.791134!10177-103C6;0.760633!10164-103B2;0.92866!10173-103C2;0.983156!10166-103B4;0.775242!10083-102B2;0.777739!10188-103D8;0.765935!10552-107I3;0.687257!10553-107I4;0.734191!10013-101C4;0.522559!10536-107G5;0.8575!10618-108G6;0.625355!10423-106C9;0.307801!10785-110H2;0.748894!12238-129G6;0.534722!12239-129G7;0.352167!12240-129G8;0.832969!10416-106C2;0.725645!10801-110I9;0.207902!10766-110F1;0.436178!10824-111C5;0.304738!10825-111C6;0.749329!10826-111C7;0.774785!10454-106G4;0.76779!10409-106B4;0.689571!10638-108I8;0.415079!10636-108I6;0.860479!10513-107D9;0.491014!10420-106C6;0.845427!10082-102B1;0.919994!10014-101C5;0.878904!10070-101I7;0.987194!10452-106G2;0.872674!10453-106G3;0.877123!10449-106F8;0.624628!10042-101F6;0.719969!10069-101I6;0.952038!10193-103E4;0.50459!10631-108I1;0.875198!10438-106E6;0.184599!10488-107B2;0.824182!10196-103E7;0.757595!10071-101I8;0.049318!10071-101I8;0.948158!10041-101F5;0.948463!10451-106G1;0.588146!10450-106F9;0.909198!10604-108F1;0.952595!10605-108F2;0.894908!10606-108F3;0.936467!10603-108E9;0.806535!10497-107C2;0.912552!10448-106F7;0.895762!10643-109A4;0.676701!10426-106D3;0.952622!10431-106D8;0.698972!10197-103E8;0.769152!10443-106F2;0.491133!10815-111B5;0.783183!10816-111B6;0.499364!10817-111B7;0.74183!10015-101C6;0.643113!10410-106B5;0.673435!10054-101G9;0.791525!10758-110E2;0.860946!10711-109H9;0.970249!10040-101F4;0.649671!10470-106I2;0.836075!10415-106C1;0.810903!10198-103E9;0.724769!10614-108G2;0.962348!10612-108F9;0.227862!10549-107H9;0.641658!10615-108G3;0.813097!10487-107B1;0.334933!10433-106E1;0.936569!10688-109F4;0.618838!10444-106F3;0.768065!10444-106F3;0.789743!10485-107A8;0.687949!10413-106B8;0.630702!10175-103C4;0.916518!10161-103A8;0.85591!12131-128D7;0.916672!10624-108H3;0.794906!10712-109I1;0.860728!10205-103F7;0.114275!10206-103F8;0.670529!10207-103F9;0.503126!10050-101G5;0.183504!10051-101G6;0.400156!10016-101C7;0.475704!10046-101G1;0.304787!10778-110G4;0.563839!10633-108I3;0.650215!10818-111B8;0.684023!10819-111B9;0.934446!10820-111C1;0.929671!10484-107A7;0.895908!10808-111A7;0.60373!10169-103B7;0.164407!10153-102I9;0.701238!13425-144D5;0.910732!13433-144E4;0.669056!13437-144E8;0.643108!11904-125F5;0.516134!11905-125F6;0.266213!10039-101F3;0.977891!10791-110H8;0.820565!10017-101C8;0.847222!10045-101F9;0.265488!10509-107D5;0.257627!10839-111E2;0.986343!10692-109F8;0.504881!10079-102A7;0.537799!10078-102A6;0.761278!10721-110A1;0.468906!10569-108B2;0.885277!10570-108B3;0.665788!10571-108B4;0.801609!10647-109A8;0.836531!10752-110D5;0.89166!10782-110G8;0.254176!10726-110A6;0.557979!10018-101C9;0.919396!10086-102B5;0.292915!10182-103D2;0.0637318!10165-103B3;0.79469!10499-107C4;0.978875!10408-106B3;0.696137!10019-101D1;0.830755!10068-101I5;0.850434!10075-102A3;0.836561!10077-102A5;0.981042!10727-110A7;0.62709!10775-110G1;0.0953069!10412-106B7;0.191533!12231-129F8;0.273494!12232-129F9;0.00243432!12233-129G1;0.0130536!12234-129G2;0.00590456!10414-106B9;0.000683414!10170-103B8;0.33789!10183-103D3;0.695873!10150-102I6;0.776723!10174-103C3;0.871752!10155-103A2;0.8821!10038-101F2;0.956637!10838-111E1;0.930458!10759-110E3;0.336168!10514-107E1;0.209972!10465-106H6;0.778334!10691-109F7;0.618849!10843-111E6;0.934692!10844-111E7;0.87653!11747-123G1;0.334413!11748-123G2;0.418465!11749-123G3;0.936569!11750-123G4;0.887215!11751-123G5;0.541463!11840-124H4;0.227388!11752-123G6;0.183167!11753-123G7;0.349041!11754-123G8;0.52668!11755-123G9;0.29104!11756-123H1;0.68393!11833-124G6;0.459633!11760-123H5;0.0359515!11836-124G9;0.749181!11758-123H3;0.656159!11835-124G8;0.424319!11762-123H7;0.537712!11838-124H2;0.333354!11757-123H2;0.539467!11759-123H4;0.0495792!11761-123H6;0.812064!11842-124H6;0.583702!11837-124H1;0.603122!10568-108B1;0.806354!13230-141I8;0.326947!13231-141I9;0.908218!10696-109G3;0.956553!10493-107B7;0.35189!10494-107B8;0.945932!10850-111F4;0.381528!10851-111F5;0.884194!10852-111F6;0.866768!10853-111F7;0.483004!10854-111F8;0.49234!10855-111F9;0.75247!10856-111G1;0.84552!10847-111F1;0.609715!10846-111E9;0.700385!10848-111F2;0.820634!10845-111E8;0.94449!10857-111G2;0.899025!10858-111G3;0.834652!10156-103A3;0.843995!11901-125F2;0.927245!11902-125F3;0.161585!11903-125F4;0.526053!10689-109F5;0.587349!10648-109A9;0.708257!10784-110H1;0.943794!10744-110C6;0.484875!10772-110F7;0.157052!10474-106I6;0.488491!10600-108E6;0.541429!10684-109E9;0.801604!12226-129F3;0.572507!12227-129F4;0.351003!10508-107D4;0.960108!10539-107G8;0.139516!10607-108F4;0.995792!10555-107I6;0.176701!10774-110F9;0.816904!10637-108I7;0.401918!10663-109C6;0.68954!10728-110A8;0.649638!10729-110A9;0.749535!10430-106D7;0.680812!10730-110B1;0.920625!10813-111B3;0.723639!10812-111B2;0.448033!10037-101F1;0.77804!10172-103C1;0.873575!10163-103B1;0.729371!10076-102A4;0.922189!10073-102A1;0.835574!10036-101E9;0.951643!10195-103E6;0.699314!10277-104E7;0.925309!10434-106E2;0.640897!10550-107I1;0.889474!10545-107H5;0.61853!10544-107H4;0.357617!10704-109H2;0.813164!10510-107D6;0.389418!10558-107I9;0.970196!10020-101D2;0.841979!10732-110B3;0.631809!10049-101G4;0.856606!10698-109G5;0.754076!10437-106E5;0.784428!10417-106C3;0.945732!10035-101E8;0.785554!10171-103B9;0.745262!10157-103A4;0.639366!10034-101E7;0.865967!10072-101I9;0.786529!10199-103F1;0.860095!10200-103F2;0.63958!10697-109G4;0.737656!10723-110A3;0.801679!10179-103C8;0.626674!10160-103A7;0.825442!10180-103C9;0.816028!10162-103A9;0.69388!10021-101D3;0.674178!10840-111E3;0.771979!10706-109H4;0.0707012!10033-101E6;0.247179!10032-101E5;0.948822!10490-107B4;0.754391!10439-106E7;0.669406!10022-101D4;0.428089!10176-103C5;0.775996!10469-106I1;0.888711!10067-101I4;0.921255!10411-106B6;0.835591!10471-106I3;0.8466!10030-101E3;0.85815!10475-106I7;0.782213!10787-110H4;0.323511!10477-106I9;0.128746!10695-109G2;0.895056!11771-123I7;0.019919!11772-123I8;0.174838!11773-123I9;0.28024!10093-102C3;0.199922!10442-106F1;0.921255!10442-106F1;0.888613!10201-103F3;0.847232!10639-108I9;0.149053!11843-124H7;0.154846!11841-124H5;0.597564!10693-109F9;0.452724!10436-106E4;0.974834!10483-107A6;0.569345!10282-104F3;0.532447!10023-101D5;0.425549!10066-101I3;0.553829!10065-101I2;0.904486!10800-110I8;0.888166!10610-108F7;0.372911!10841-111E4;0.526916!10541-107H1;0.618474!10842-111E5;0.779314!10562-108A4;0.315223!10024-101D6;0.340139!10064-101I1;0.724421!10609-108F6;0.692218!10048-101G3;0.42647!10781-110G7;0.431699!10181-103D1;0.527539!10159-103A6;0.912171!10056-101H2;0.668432!10737-110B8;0.948933!10025-101D7;0.533758!10044-101F8;0.453313!10424-106D1;0.976091!10463-106H4;0.140519!10616-108G4;0.777398!10486-107A9;0.742314!10062-101H8;0.863943!10202-103F4;0.531719!10158-103A5;0.955191!10441-106E9;0.937225!10031-101E4;0.877671!10063-101H9;0.767139!10063-101H9;0.855771!11763-123H8;0.856846!11765-123I1;0.499944!11768-123I4;0.373216!10807-111A6;0.784171!10790-110H7;0.372684!10798-110I6;0.723797!10786-110H3;0.945824!10591-108D6;0.762722!10593-108D8;0.865819!10590-108D5;0.874159!10026-101D8;0.698778!10096-102C6;0.750644!10168-103B6;0.383016!10154-103A1;0.819597!10209-103G2;0.968473!10061-101H7;0.991053!10027-101D9;0.772549!10043-101F7;0.412226!10783-110G9;0.733752!10028-101E1;0.817693!10060-101H6;0.342148!10203-103F5;0.292968!10059-101H5;0.913126!10047-101G2;0.806632!10029-101E2;0.402609!10058-101H4;0.650633!10418-106C4;0.975829!10492-107B6;0.989867!10694-109G1;0.909237!10797-110I5;0.394847!10057-101H3;0.477545!10100-102D1;0.432742!10055-101H1;0.672087!10204-103F6;0.762093!10191-103E2;0.208904!10563-108A5;0.989478
|name=motif_TGAANC
|name=motif_TGAANC
|tomtom_result=STE12#MA0393.1;0;0.00103734;0.493772;0.987544;6;TGAAAC;TGAAACA;+!che-1#MA0260.1;-1;0.00612994;2.91785;1;5;TGAAAC;GAAACC;+!AP1#MA0099.2;0;0.00825847;3.93103;1;6;TGAAAC;TGACTCA;+!USV1#MA0413.1;10;0.0150005;7.14022;1;6;TGAAAC;AAATTCCCCCTGAATTTGTG;+!IRF1#MA0050.1;5;0.0159161;7.57608;1;6;TGAAAC;GAAAGCGAAACC;+!STAT1#MA0137.1;6;0.0161754;7.6995;1;6;TGAAAC;GGAAAACGAAACTG;+!OPI1#MA0349.1;0;0.0177364;8.44252;1;6;TGAAAC;CGAACCG;+!RXRA::VDR#MA0074.1;0;0.0209735;9.98339;1;6;TGAAAC;TGAACCCGATGACCC;-
}}
}}

Latest revision as of 12:55, 7 September 2012

Full Name: motif_TGAANC

Motif matrix
POACGT
0100011520
0200115200
0311520000
0411520000
052880288028802880
0601152000

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
STE12#MA0393.100.001037340.4937720.9875446TGAAACTGAAACA+
che-1#MA0260.1-10.006129942.9178515TGAAACGAAACC+
AP1#MA0099.200.008258473.9310316TGAAACTGACTCA+
USV1#MA0413.1100.01500057.1402216TGAAACAAATTCCCCCTGAATTTGTG+
IRF1#MA0050.150.01591617.5760816TGAAACGAAAGCGAAACC+
STAT1#MA0137.160.01617547.699516TGAAACGGAAAACGAAACTG+
OPI1#MA0349.100.01773648.4425216TGAAACCGAACCG+
RXRA::VDR#MA0074.100.02097359.9833916TGAAACTGAACCCGATGACCC-
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