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MacroAPE 1083:Motif CTNATG: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;400;0;0!02;0;0;0;400!03;100;100;100;100!04;400;0;0;0!05;0;0;0;400!06;0;0;400;0 |macroape_1083_sample_pvalues=11376-118A8;0.560128!11327-...")
 
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0828-111C9;0.270926!10788-110H5;0.697432!10792-110H9;0.808235!10765-110E9;0.769331!10829-111D1;0.362277!10830-111D2;0.938307!10831-111D3;0.75196!10832-111D4;0.37679!10833-111D5;0.844108!10764-110E8;0.777536!10770-110F5;0.520414!10399-106A3;0.228787!10400-106A4;0.497836!10405-106A9;0.52716!10834-111D6;0.489704!10835-111D7;0.450194!10836-111D8;0.792602!10837-111D9;0.223552!10699-109G6;0.766531!10802-111A1;0.568456!10796-110I4;0.964387!10010-101C1;0.418423!10810-111A9;0.65956!10421-106C7;0.742114!10708-109H6;0.431447!12235-129G3;0.357857!12236-129G4;0.197828!12237-129G5;0.0977057!10167-103B5;0.176004!10151-102I7;0.102621!10428-106D5;0.172099!10795-110I3;0.784238!10805-111A4;0.992049!10052-101G7;0.930917!10189-103D9;0.852304!10589-108D4;0.154433!10425-106D2;0.425375!10427-106D4;0.214254!10702-109G9;0.908254!10432-106D9;0.267696!10496-107C1;0.374837!10718-109I7;0.855068!10011-101C2;0.308667!10053-101G8;0.838102!10686-109F2;0.49409!10084-102B3;0.623209!10012-101C3;0.105401!10085-102B4;0.101827!10482-107A5;0.0763076!10419-106C5;0.865362!10080-102A8;0.5734!10760-110E4;0.0907113!10709-109H7;0.280878!10710-109H8;0.370307!10703-109H1;0.515518!10719-109I8;0.51605!10642-109A3;0.90252!10177-103C6;0.243781!10164-103B2;0.355592!10173-103C2;0.182158!10166-103B4;0.220054!10083-102B2;0.22062!10188-103D8;0.166101!10552-107I3;0.184999!10553-107I4;0.894249!10013-101C4;0.202106!10536-107G5;0.426619!10618-108G6;0.225004!10423-106C9;0.450565!10785-110H2;0.325274!12238-129G6;0.464789!12239-129G7;0.255768!12240-129G8;0.317235!10416-106C2;0.164268!10801-110I9;0.559926!10766-110F1;0.591588!10824-111C5;0.74357!10825-111C6;0.743135!10826-111C7;0.714695!10454-106G4;0.706421!10409-106B4;0.794298!10638-108I8;0.742271!10636-108I6;0.72981!10513-107D9;0.236759!10420-106C6;0.271276!10082-102B1;0.976231!10014-101C5;0.0778585!10070-101I7;0.105637!10452-106G2;0.213339!10453-106G3;0.52175!10449-106F8;0.574971!10042-101F6;0.528351!10069-101I6;0.186413!10193-103E4;0.874928!10631-108I1;0.156929!10438-106E6;0.682607!10488-107B2;0.803766!10196-103E7;0.438342!10071-101I8;0.966961!10071-101I8;0.132382!10041-101F5;0.132311!10451-106G1;0.763003!10450-106F9;0.945198!10604-108F1;0.488238!10605-108F2;0.743611!10606-108F3;0.756712!10603-108E9;0.862115!10497-107C2;0.761835!10448-106F7;0.823235!10643-109A4;0.707637!10426-106D3;0.437063!10431-106D8;0.578667!10197-103E8;0.464947!10443-106F2;0.790633!10815-111B5;0.16009!10816-111B6;0.728195!10817-111B7;0.632652!10015-101C6;0.726852!10410-106B5;0.655182!10054-101G9;0.304993!10758-110E2;0.667669!10711-109H9;0.809708!10040-101F4;0.921076!10470-106I2;0.0851577!10415-106C1;0.236318!10198-103E9;0.514713!10614-108G2;0.349018!10612-108F9;0.976702!10549-107H9;0.705639!10615-108G3;0.482885!10487-107B1;0.642452!10433-106E1;0.899321!10688-109F4;0.12151!10444-106F3;0.663988!10444-106F3;0.443483!10485-107A8;0.287232!10413-106B8;0.62794!10175-103C4;0.291273!10161-103A8;0.121043!12131-128D7;0.171191!10624-108H3;0.0508352!10712-109I1;0.842669!10205-103F7;0.475251!10206-103F8;0.718444!10207-103F9;0.629484!10050-101G5;0.911871!10051-101G6;0.593206!10016-101C7;0.63185!10046-101G1;0.530714!10778-110G4;0.469144!10633-108I3;0.563352!10818-111B8;0.505943!10819-111B9;0.948089!10820-111C1;0.923923!10484-107A7;0.95244!10808-111A7;0.963062!10169-103B7;0.790148!10153-102I9;0.174537!13425-144D5;0.21766!13433-144E4;0.715028!13437-144E8;0.877972!11904-125F5;0.645073!11905-125F6;0.257277!10039-101F3;0.122196!10791-110H8;0.0920432!10017-101C8;0.199079!10045-101F9;0.645598!10509-107D5;0.779082!10839-111E2;0.330626!10692-109F8;0.637938!10079-102A7;0.905021!10078-102A6;0.477366!10721-110A1;0.46128!10569-108B2;0.866063!10570-108B3;0.856699!10571-108B4;0.773018!10647-109A8;0.861923!10752-110D5;0.957557!10782-110G8;0.755126!10726-110A6;0.925283!10018-101C9;0.513066!10086-102B5;0.275626!10182-103D2;0.00284665!10165-103B3;0.138163!10499-107C4;0.180011!10408-106B3;0.841557!10019-101D1;0.172363!10068-101I5;0.333526!10075-102A3;0.730818!10077-102A5;0.369349!10727-110A7;0.395705!10775-110G1;0.336643!10412-106B7;0.523615!12231-129F8;0.89027!12232-129F9;0.29848!12233-129G1;0.617154!12234-129G2;0.524965!10414-106B9;0.239584!10170-103B8;0.588847!10183-103D3;0.0622032!10150-102I6;0.102031!10174-103C3;0.13794!10155-103A2;0.241233!10038-101F2;0.309765!10838-111E1;0.235088!10759-110E3;0.8202!10514-107E1;0.37677!10465-106H6;0.908619!10691-109F7;0.308789!10843-111E6;0.841451!10844-111E7;0.889911!11747-123G1;0.746543!11748-123G2;0.209619!11749-123G3;0.0957555!11750-123G4;0.129724!11751-123G5;0.440767!11840-124H4;0.256666!11752-123G6;0.39777!11753-123G7;0.0858826!11754-123G8;0.264975!11755-123G9;0.288728!11756-123H1;0.420967!11833-124G6;0.477022!11760-123H5;0.284895!11836-124G9;0.385882!11758-123H3;0.756365!11835-124G8;0.745387!11762-123H7;0.561524!11838-124H2;0.613203!11757-123H2;0.755606!11759-123H4;0.576117!11761-123H6;0.674113!11842-124H6;0.407329!11837-124H1;0.137325!10568-108B1;0.567429!13230-141I8;0.758036!13231-141I9;0.207285!10696-109G3;0.190051!10493-107B7;0.536009!10494-107B8;0.635338!10850-111F4;0.890057!10851-111F5;0.269086!10852-111F6;0.886088!10853-111F7;0.625733!10854-111F8;0.858579!10855-111F9;0.927501!10856-111G1;0.731006!10847-111F1;0.632223!10846-111E9;0.883882!10848-111F2;0.854432!10845-111E8;0.988209!10857-111G2;0.612683!10858-111G3;0.472018!10156-103A3;0.554925!11901-125F2;0.121817!11902-125F3;0.208542!11903-125F4;0.440128!10689-109F5;0.256648!10648-109A9;0.696032!10784-110H1;0.890886!10744-110C6;0.591886!10772-110F7;0.563451!10474-106I6;0.490486!10600-108E6;0.548618!10684-109E9;0.487128!12226-129F3;0.584165!12227-129F4;0.243813!10508-107D4;0.613523!10539-107G8;0.327636!10607-108F4;0.647323!10555-107I6;0.662096!10774-110F9;0.816523!10637-108I7;0.68451!10663-109C6;0.762936!10728-110A8;0.630293!10729-110A9;0.63863!10430-106D7;0.14505!10730-110B1;0.523056!10813-111B3;0.599477!10812-111B2;0.485332!10037-101F1;0.968102!10172-103C1;0.114728!10163-103B1;0.0574008!10076-102A4;0.15029!10073-102A1;0.11556!10036-101E9;0.132126!10195-103E6;0.0896919!10277-104E7;0.104882!10434-106E2;0.0494681!10550-107I1;0.286869!10545-107H5;0.496437!10544-107H4;0.560278!10704-109H2;0.525949!10510-107D6;0.139546!10558-107I9;0.994047!10020-101D2;0.516339!10732-110B3;0.893541!10049-101G4;0.802656!10698-109G5;0.341057!10437-106E5;0.362926!10417-106C3;0.772098!10035-101E8;0.331762!10171-103B9;0.0892373!10157-103A4;0.0827063!10034-101E7;0.131976!10072-101I9;0.0898246!10199-103F1;0.168286!10200-103F2;0.953397!10697-109G4;0.661599!10723-110A3;0.817672!10179-103C8;0.0103404!10160-103A7;0.0885344!10180-103C9;0.0813579!10162-103A9;0.103293!10021-101D3;0.221085!10840-111E3;0.361686!10706-109H4;0.783041!10033-101E6;0.720116!10032-101E5;0.0703757!10490-107B4;0.0959692!10439-106E7;0.579494!10022-101D4;0.240819!10176-103C5;0.872593!10469-106I1;0.13315!10067-101I4;0.20197!10411-106B6;0.608563!10471-106I3;0.235459!10030-101E3;0.846033!10475-106I7;0.874121!10787-110H4;0.869423!10477-106I9;0.921046!10695-109G2;0.984207!11771-123I7;0.360835!11772-123I8;0.637364!11773-123I9;0.508418!10093-102C3;0.824729!10442-106F1;0.93123!10442-106F1;0.20779!10201-103F3;0.162611!10639-108I9;0.888345!11843-124H7;0.713516!11841-124H5;0.132126!10693-109F9;0.950965!10436-106E4;0.90703!10483-107A6;0.560932!10282-104F3;0.642642!10023-101D5;0.833974!10066-101I3;0.741229!10065-101I2;0.798771!10800-110I8;0.51557!10610-108F7;0.666625!10841-111E4;0.89615!10541-107H1;0.868071!10842-111E5;0.953083!10562-108A4;0.756141!10024-101D6;0.984088!10064-101I1;0.0814981!10609-108F6;0.170921!10048-101G3;0.335689!10781-110G7;0.980016!10181-103D1;0.462452!10159-103A6;0.281947!10056-101H2;0.261769!10737-110B8;0.425894!10025-101D7;0.185425!10044-101F8;0.315353!10424-106D1;0.446036!10463-106H4;0.653901!10616-108G4;0.808846!10486-107A9;0.308779!10062-101H8;0.305637!10202-103F4;0.200587!10158-103A5;0.725859!10441-106E9;0.102184!10031-101E4;0.420967!10063-101H9;0.112182!10063-101H9;0.128692!11763-123H8;0.54954!11765-123I1;0.443477!11768-123I4;0.418621!10807-111A6;0.595797!10790-110H7;0.920964!10798-110I6;0.895696!10786-110H3;0.458235!10591-108D6;0.908019!10593-108D8;0.93278!10590-108D5;0.577678!10026-101D8;0.675257!10096-102C6;0.822573!10168-103B6;0.654122!10154-103A1;0.123115!10209-103G2;0.162789!10061-101H7;0.739801!10027-101D9;0.446139!10043-101F7;0.123027!10783-110G9;0.0570447!10028-101E1;0.650834!10060-101H6;0.602597!10203-103F5;0.513473!10059-101H5;0.795792!10047-101G2;0.435754!10029-101E2;0.262233!10058-101H4;0.61155!10418-106C4;0.583689!10492-107B6;0.370952!10694-109G1;0.75829!10797-110I5;0.840037!10057-101H3;0.962507!10100-102D1;0.716914!10055-101H1;0.738074!10204-103F6;0.60244!10191-103E2;0.830739!10563-108A5;0.497483
|name=motif_CTNATG
|name=motif_CTNATG
|tomtom_result=zen#MA0256.1;0;0.00250412;1.19196;1;6;CTAATG;CTAATGA;+!Pdx1#MA0132.1;0;0.00597158;2.84247;1;6;CTAATG;CTAATT;+!eve#MA0221.1;0;0.00743605;3.53956;1;6;CTAATG;CTAATGA;+!Scr#MA0203.1;0;0.0125894;5.99255;1;6;CTAATG;TTAATGA;+!ems#MA0219.1;0;0.0131343;6.25192;1;6;CTAATG;TTAATGA;+!ind#MA0228.1;0;0.0142858;6.80004;1;6;CTAATG;CTAATTA;+!PEND#MA0127.1;4;0.0148511;7.06913;1;6;CTAATG;ACTTCTTATT;+!Pou5f1#MA0142.1;4;0.0165922;7.89787;1;6;CTAATG;CTTTGTTATGCAAAT;+!pb#MA0238.1;0;0.0182497;8.68685;1;6;CTAATG;TTAATTA;+!ap#MA0209.1;0;0.0205323;9.7734;1;6;CTAATG;CTAATTA;+
}}
}}

Latest revision as of 13:00, 7 September 2012

Full Name: motif_CTNATG

Motif matrix
POACGT
01040000
02000400
03100100100100
04400000
05000400
06004000

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
zen#MA0256.100.002504121.1919616CTAATGCTAATGA+
Pdx1#MA0132.100.005971582.8424716CTAATGCTAATT+
eve#MA0221.100.007436053.5395616CTAATGCTAATGA+
Scr#MA0203.100.01258945.9925516CTAATGTTAATGA+
ems#MA0219.100.01313436.2519216CTAATGTTAATGA+
ind#MA0228.100.01428586.8000416CTAATGCTAATTA+
PEND#MA0127.140.01485117.0691316CTAATGACTTCTTATT+
Pou5f1#MA0142.140.01659227.8978716CTAATGCTTTGTTATGCAAAT+
pb#MA0238.100.01824978.6868516CTAATGTTAATTA+
ap#MA0209.100.02053239.773416CTAATGCTAATTA+
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MacroAPE_1083:Motif_CTNATG&oldid=2133846"