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MacroAPE 1083:Motif30: Difference between revisions

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111C8;0.180498!10789-110H6;0.310283!10828-111C9;0.276674!10788-110H5;0.397459!10792-110H9;0.183854!10765-110E9;0.324749!10829-111D1;0.620136!10830-111D2;0.364899!10831-111D3;0.273412!10832-111D4;0.234099!10833-111D5;0.737175!10764-110E8;0.415094!10770-110F5;0.615365!10399-106A3;0.940683!10400-106A4;0.492202!10405-106A9;0.512466!10834-111D6;0.390721!10835-111D7;0.697542!10836-111D8;0.047491!10837-111D9;0.0798368!10699-109G6;0.112556!10802-111A1;0.0271393!10796-110I4;0.00133133!10010-101C1;0.132797!10810-111A9;0.0381966!10421-106C7;0.0776057!10708-109H6;0.481576!12235-129G3;0.315459!12236-129G4;0.465361!12237-129G5;0.247996!10167-103B5;0.369824!10151-102I7;0.0039439!10428-106D5;0.00655225!10795-110I3;0.936468!10805-111A4;0.108256!10052-101G7;0.173295!10189-103D9;0.12425!10589-108D4;0.0781931!10425-106D2;0.12881!10427-106D4;0.334903!10702-109G9;0.482501!10432-106D9;0.837921!10496-107C1;0.104048!10718-109I7;0.508488!10011-101C2;0.383078!10053-101G8;0.0650494!10686-109F2;0.563767!10084-102B3;0.874271!10012-101C3;0.0245526!10085-102B4;0.00319183!10482-107A5;0.0584058!10419-106C5;0.0139071!10080-102A8;0.0215979!10760-110E4;0.355212!10709-109H7;0.166561!10710-109H8;0.119451!10703-109H1;0.0480175!10719-109I8;0.236339!10642-109A3;0.396701!10177-103C6;0.78915!10164-103B2;0.0126477!10173-103C2;0.00515824!10166-103B4;0.0809126!10083-102B2;0.0567843!10188-103D8;0.0695706!10552-107I3;0.0107539!10553-107I4;0.103897!10013-101C4;0.50934!10536-107G5;0.0686832!10618-108G6;0.393975!10423-106C9;0.0140925!10785-110H2;0.107832!12238-129G6;0.0152136!12239-129G7;0.221874!12240-129G8;0.956006!10416-106C2;0.594847!10801-110I9;0.280142!10766-110F1;0.119316!10824-111C5;0.0458583!10825-111C6;0.0752241!10826-111C7;0.0488033!10454-106G4;0.0508733!10409-106B4;0.167807!10638-108I8;0.0885318!10636-108I6;0.11368!10513-107D9;0.453061!10420-106C6;0.259433!10082-102B1;0.170127!10014-101C5;0.308835!10070-101I7;0.137542!10452-106G2;0.105366!10453-106G3;0.566072!10449-106F8;0.703291!10042-101F6;0.788924!10069-101I6;0.0012501!10193-103E4;0.0401873!10631-108I1;0.00196351!10438-106E6;0.234714!10488-107B2;0.691646!10196-103E7;0.223197!10071-101I8;0.36062!10071-101I8;0.127934!10041-101F5;0.0633026!10451-106G1;0.0171367!10450-106F9;0.0878445!10604-108F1;0.276271!10605-108F2;0.0181927!10606-108F3;0.0598068!10603-108E9;0.0456881!10497-107C2;0.0125421!10448-106F7;0.0549388!10643-109A4;0.796174!10426-106D3;0.351567!10431-106D8;0.125465!10197-103E8;0.00272484!10443-106F2;0.0252023!10815-111B5;0.419141!10816-111B6;0.126561!10817-111B7;0.0641674!10015-101C6;0.0836335!10410-106B5;0.00749602!10054-101G9;0.515322!10758-110E2;0.00452966!10711-109H9;0.435574!10040-101F4;0.047257!10470-106I2;0.00308752!10415-106C1;0.276117!10198-103E9;0.104758!10614-108G2;0.134246!10612-108F9;0.633403!10549-107H9;0.0495139!10615-108G3;0.262807!10487-107B1;0.066231!10433-106E1;0.274983!10688-109F4;0.0413842!10444-106F3;0.213993!10444-106F3;0.445407!10485-107A8;0.61083!10413-106B8;0.148861!10175-103C4;0.514292!10161-103A8;0.0059162!12131-128D7;0.00232442!10624-108H3;0.213196!10712-109I1;0.531388!10205-103F7;0.219031!10206-103F8;0.0284263!10207-103F9;0.0430381!10050-101G5;0.236881!10051-101G6;0.152114!10016-101C7;0.0435392!10046-101G1;0.0336087!10778-110G4;0.0278548!10633-108I3;0.817711!10818-111B8;0.661134!10819-111B9;0.0978379!10820-111C1;0.106044!10484-107A7;0.1155!10808-111A7;0.0546085!10169-103B7;0.400891!10153-102I9;0.00591348!13425-144D5;0.00635832!13433-144E4;0.366387!13437-144E8;0.281991!11904-125F5;0.436418!11905-125F6;0.683955!10039-101F3;0.261414!10791-110H8;0.00438388!10017-101C8;0.324413!10045-101F9;0.153755!10509-107D5;0.176216!10839-111E2;0.0137468!10692-109F8;0.101024!10079-102A7;0.0526306!10078-102A6;0.0106536!10721-110A1;0.0327713!10569-108B2;0.326359!10570-108B3;0.283833!10571-108B4;0.523706!10647-109A8;0.28708!10752-110D5;0.0341229!10782-110G8;0.0197225!10726-110A6;0.433791!10018-101C9;0.00420135!10086-102B5;0.335546!10182-103D2;0.473315!10165-103B3;0.0158547!10499-107C4;0.00408144!10408-106B3;0.0726917!10019-101D1;0.0460549!10068-101I5;0.0791429!10075-102A3;0.0620404!10077-102A5;0.162703!10727-110A7;0.304301!10775-110G1;0.202228!10412-106B7;0.506368!12231-129F8;0.800989!12232-129F9;0.808898!12233-129G1;0.662137!12234-129G2;0.791247!10414-106B9;0.866885!10170-103B8;0.0937528!10183-103D3;0.00650155!10150-102I6;0.0113311!10174-103C3;0.00628806!10155-103A2;0.018135!10038-101F2;0.00179261!10838-111E1;0.00346232!10759-110E3;0.68193!10514-107E1;0.115979!10465-106H6;0.216206!10691-109F7;0.0186682!10843-111E6;0.623145!10844-111E7;0.397855!11747-123G1;0.384745!11748-123G2;0.690997!11749-123G3;0.464952!11750-123G4;0.915314!11751-123G5;0.847452!11840-124H4;0.352216!11752-123G6;0.349754!11753-123G7;0.98248!11754-123G8;0.47672!11755-123G9;0.736468!11756-123H1;0.683747!11833-124G6;0.726895!11760-123H5;0.399736!11836-124G9;0.682776!11758-123H3;0.111916!11835-124G8;0.799392!11762-123H7;0.661314!11838-124H2;0.710417!11757-123H2;0.79208!11759-123H4;0.644103!11761-123H6;0.993775!11842-124H6;0.747749!11837-124H1;0.637362!10568-108B1;0.708085!13230-141I8;0.267093!13231-141I9;0.0933487!10696-109G3;0.491945!10493-107B7;0.406171!10494-107B8;0.259758!10850-111F4;0.220945!10851-111F5;0.12312!10852-111F6;0.569317!10853-111F7;0.41145!10854-111F8;0.246399!10855-111F9;0.123789!10856-111G1;0.264383!10847-111F1;0.759931!10846-111E9;0.490455!10848-111F2;0.625288!10845-111E8;0.235!10857-111G2;0.440989!10858-111G3;0.334288!10156-103A3;0.119803!11901-125F2;0.00750257!11902-125F3;0.694327!11903-125F4;0.317548!10689-109F5;0.581648!10648-109A9;0.0321104!10784-110H1;0.0721624!10744-110C6;0.0238333!10772-110F7;0.600947!10474-106I6;0.465226!10600-108E6;0.357049!10684-109E9;0.299472!12226-129F3;0.103415!12227-129F4;0.123224!10508-107D4;0.284554!10539-107G8;0.642844!10607-108F4;0.974856!10555-107I6;0.321006!10774-110F9;0.73292!10637-108I7;0.113913!10663-109C6;0.157067!10728-110A8;0.404249!10729-110A9;0.024073!10430-106D7;0.763109!10730-110B1;0.0745165!10813-111B3;0.518613!10812-111B2;0.916238!10037-101F1;0.492165!10172-103C1;0.00323705!10163-103B1;0.00518652!10076-102A4;0.00958818!10073-102A1;0.00662961!10036-101E9;0.12757!10195-103E6;0.00703124!10277-104E7;0.00651968!10434-106E2;0.00262108!10550-107I1;0.248883!10545-107H5;0.135932!10544-107H4;0.110288!10704-109H2;0.0163793!10510-107D6;0.316055!10558-107I9;0.182699!10020-101D2;0.557643!10732-110B3;0.113321!10049-101G4;0.0769547!10698-109G5;0.19023!10437-106E5;0.0420024!10417-106C3;0.144114!10035-101E8;0.0536241!10171-103B9;0.0036629!10157-103A4;0.00931262!10034-101E7;0.0070047!10072-101I9;0.00460421!10199-103F1;0.0964872!10200-103F2;0.126788!10697-109G4;0.00779969!10723-110A3;0.522893!10179-103C8;0.207049!10160-103A7;0.0351789!10180-103C9;0.0264345!10162-103A9;0.0596053!10021-101D3;0.0637327!10840-111E3;0.158419!10706-109H4;0.773628!10033-101E6;0.0888182!10032-101E5;0.00222692!10490-107B4;0.00321047!10439-106E7;0.144228!10022-101D4;0.10093!10176-103C5;0.0337952!10469-106I1;0.00945769!10067-101I4;0.122429!10411-106B6;0.0588203!10471-106I3;0.603535!10030-101E3;0.310761!10475-106I7;0.025331!10787-110H4;0.358581!10477-106I9;0.561107!10695-109G2;0.394448!11771-123I7;0.713721!11772-123I8;0.465879!11773-123I9;0.953262!10093-102C3;0.794261!10442-106F1;0.150186!10442-106F1;0.0779559!10201-103F3;0.133013!10639-108I9;0.603085!11843-124H7;0.0890271!11841-124H5;0.0988271!10693-109F9;0.252032!10436-106E4;0.523705!10483-107A6;0.247077!10282-104F3;0.598582!10023-101D5;0.0129817!10066-101I3;0.00842798!10065-101I2;0.0302481!10800-110I8;0.0159299!10610-108F7;0.169953!10841-111E4;0.643857!10541-107H1;0.562952!10842-111E5;0.228943!10562-108A4;0.665663!10024-101D6;0.997428!10064-101I1;0.117666!10609-108F6;0.0923074!10048-101G3;0.188587!10781-110G7;0.125343!10181-103D1;0.0387091!10159-103A6;0.00956838!10056-101H2;0.0014084!10737-110B8;0.01531!10025-101D7;0.804461!10044-101F8;0.183929!10424-106D1;0.0741352!10463-106H4;0.917788!10616-108G4;0.0601061!10486-107A9;0.0528213!10062-101H8;0.208241!10202-103F4;0.49323!10158-103A5;0.0899518!10441-106E9;0.000424428!10031-101E4;0.845918!10063-101H9;0.00600374!10063-101H9;0.0903796!11763-123H8;0.0331008!11765-123I1;0.26789!11768-123I4;0.0363322!10807-111A6;0.0977252!10790-110H7;0.532567!10798-110I6;0.213043!10786-110H3;0.436162!10591-108D6;0.286478!10593-108D8;0.324861!10590-108D5;0.173418!10026-101D8;0.0440206!10096-102C6;0.0592088!10168-103B6;0.680937!10154-103A1;0.00135213!10209-103G2;0.00212086!10061-101H7;0.00248765!10027-101D9;0.0114446!10043-101F7;0.843594!10783-110G9;0.140482!10028-101E1;0.0745775!10060-101H6;0.132069!10203-103F5;0.103581!10059-101H5;0.00239963!10047-101G2;0.0090772!10029-101E2;0.00482841!10058-101H4;0.0129516!10418-106C4;0.0102579!10492-107B6;0.0183277!10694-109G1;0.0831273!10797-110I5;0.488113!10057-101H3;0.231983!10100-102D1;0.0669486!10055-101H1;0.118531!10204-103F6;0.0929804!10191-103E2;0.128517!10563-108A5;0.0326207
|name=motif30
|name=motif30
|tomtom_result=Dof2#MA0020.1;-1;0.00141789;0.674915;1;6;CAAAGCAG;AAAGCA;+!MNB1A#MA0053.1;-1;0.0043223;2.05742;1;5;CAAAGCAG;AAAGC;+!PBF#MA0064.1;-1;0.00463821;2.20779;1;5;CAAAGCAG;AAAGC;+!Dof3#MA0021.1;-1;0.00612964;2.91771;1;6;CAAAGCAG;AAAGCG;+!FOXA1#MA0148.1;0;0.0128991;6.13995;1;8;CAAAGCAG;CAAAGTAAACA;-!RME1#MA0370.1;2;0.0167822;7.98831;1;8;CAAAGCAG;TCCAAAGGAA;+
}}
}}

Latest revision as of 13:10, 7 September 2012

Full Name: motif30

Motif matrix
POACGT
0101988353770
0225260000
0314333091331794
0425260000
0500252600
0602128939710
0725260000
0800252600

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Dof2#MA0020.1-10.001417890.67491516CAAAGCAGAAAGCA+
MNB1A#MA0053.1-10.00432232.0574215CAAAGCAGAAAGC+
PBF#MA0064.1-10.004638212.2077915CAAAGCAGAAAGC+
Dof3#MA0021.1-10.006129642.9177116CAAAGCAGAAAGCG+
FOXA1#MA0148.100.01289916.1399518CAAAGCAGCAAAGTAAACA-
RME1#MA0370.120.01678227.9883118CAAAGCAGTCCAAAGGAA+
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