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MacroAPE 1083:CNhs10632 bl f0: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;1832.7104620614114;4.020415007791933;1937.0976184984888;1931.6318008833125!2;2.6369212336809564;0.0;5702.823375217334;0.0!3;35.5491563507745...")
 
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9A4;0.128975!12183-129A5;0.075826!12184-129A6;0.067035!10809-111A8;0.0339609!10597-108E3;0.0612683!10717-109I6;0.056615!10455-106G5;0.417223!10534-107G3;0.000245456!10429-106D6;5.62751e-10!10464-106H5;5.95403e-07!10827-111C8;6.53314e-07!10789-110H6;0.00251496!10828-111C9;0.0370105!10788-110H5;0.135566!10792-110H9;0.000326405!10765-110E9;0.00524906!10829-111D1;0.000242605!10830-111D2;0.0019895!10831-111D3;0.1093!10832-111D4;0.0454011!10833-111D5;0.000753442!10764-110E8;0.00534181!10770-110F5;0.100597!10399-106A3;0.0477204!10400-106A4;0.00862889!10405-106A9;0.0072822!10834-111D6;0.00861031!10835-111D7;0.0618657!10836-111D8;0.000354767!10837-111D9;0.00361768!10699-109G6;0.00558136!10802-111A1;1.43926e-05!10796-110I4;0.00011069!10010-101C1;0.596088!10810-111A9;0.000187907!10421-106C7;2.55929e-05!10708-109H6;0.0698484!12235-129G3;0.00583005!12236-129G4;0.00519234!12237-129G5;0.0200574!10167-103B5;0.0400267!10151-102I7;0.672097!10428-106D5;0.896469!10795-110I3;0.0015036!10805-111A4;0.000163498!10052-101G7;0.0274144!10189-103D9;0.000347048!10589-108D4;2.93173e-05!10425-106D2;0.0107871!10427-106D4;0.000937549!10702-109G9;0.040565!10432-106D9;0.4222!10496-107C1;0.295377!10718-109I7;0.43685!10011-101C2;0.00822312!10053-101G8;0.00143319!10686-109F2;0.107507!10084-102B3;0.0769211!10012-101C3;0.777978!10085-102B4;0.841753!10482-107A5;0.682562!10419-106C5;0.0251296!10080-102A8;0.000126006!10760-110E4;0.000824294!10709-109H7;0.60206!10710-109H8;0.645375!10703-109H1;0.958612!10719-109I8;0.00188845!10642-109A3;3.41944e-07!10177-103C6;2.37137e-07!10164-103B2;0.505915!10173-103C2;0.812437!10166-103B4;0.0668046!10083-102B2;0.262457!10188-103D8;0.295097!10552-107I3;0.919406!10553-107I4;0.000123911!10013-101C4;0.904019!10536-107G5;0.00100141!10618-108G6;0.000366806!10423-106C9;0.975174!10785-110H2;0.152001!12238-129G6;0.564992!12239-129G7;3.79179e-05!12240-129G8;6.78627e-05!10416-106C2;9.65612e-06!10801-110I9;1.62215e-05!10766-110F1;0.0367314!10824-111C5;0.149084!10825-111C6;0.00104291!10826-111C7;0.00100702!10454-106G4;0.000880137!10409-106B4;9.46009e-07!10638-108I8;0.00271694!10636-108I6;0.0015464!10513-107D9;0.0471184!10420-106C6;0.598487!10082-102B1;8.09164e-08!10014-101C5;8.07588e-07!10070-101I7;3.92652e-09!10452-106G2;3.04476e-07!10453-106G3;0.00823064!10449-106F8;0.00188943!10042-101F6;0.00196831!10069-101I6;0.528218!10193-103E4;0.00159321!10631-108I1;0.613576!10438-106E6;5.23203e-06!10488-107B2;0.771149!10196-103E7;0.0145619!10071-101I8;0.00881718!10071-101I8;1.7967e-05!10041-101F5;0.247243!10451-106G1;0.00320909!10450-106F9;7.43758e-06!10604-108F1;3.48527e-07!10605-108F2;0.98935!10606-108F3;0.462456!10603-108E9;0.624144!10497-107C2;0.853215!10448-106F7;0.710641!10643-109A4;9.28422e-05!10426-106D3;0.685187!10431-106D8;0.121896!10197-103E8;0.420839!10443-106F2;4.19279e-05!10815-111B5;0.107756!10816-111B6;0.0188163!10817-111B7;0.00432029!10015-101C6;0.0178358!10410-106B5;4.50568e-07!10054-101G9;0.00037247!10758-110E2;0.009752!10711-109H9;0.00192783!10040-101F4;0.000568424!10470-106I2;0.554565!10415-106C1;0.45185!10198-103E9;0.176169!10614-108G2;4.92391e-06!10612-108F9;0.398988!10549-107H9;0.551195!10615-108G3;1.34181e-10!10487-107B1;2.09543e-05!10433-106E1;0.00107581!10688-109F4;0.737257!10444-106F3;0.138375!10444-106F3;0.791075!10485-107A8;0.82704!10413-106B8;0.00107404!10175-103C4;0.00297021!10161-103A8;0.705701!12131-128D7;0.804177!10624-108H3;0.105881!10712-109I1;0.112909!10205-103F7;0.0551803!10206-103F8;0.0281516!10207-103F9;0.0113553!10050-101G5;0.0717532!10051-101G6;1.47517e-07!10016-101C7;0.000995837!10046-101G1;0.00179914!10778-110G4;0.0261317!10633-108I3;0.364767!10818-111B8;0.0986778!10819-111B9;0.0243969!10820-111C1;0.0268118!10484-107A7;0.0217195!10808-111A7;0.00740319!10169-103B7;0.000356107!10153-102I9;0.692058!13425-144D5;0.934988!13433-144E4;0.336653!13437-144E8;0.319755!11904-125F5;0.141565!11905-125F6;0.628376!10039-101F3;0.924259!10791-110H8;0.723968!10017-101C8;0.765409!10045-101F9;2.46106e-07!10509-107D5;0.00162258!10839-111E2;0.0104229!10692-109F8;5.13233e-05!10079-102A7;0.445073!10078-102A6;0.0114863!10721-110A1;0.00936096!10569-108B2;0.00176678!10570-108B3;0.433833!10571-108B4;0.0924438!10647-109A8;0.378902!10752-110D5;9.00908e-10!10782-110G8;0.00706423!10726-110A6;0.0209405!10018-101C9;0.510445!10086-102B5;3.84935e-06!10182-103D2;3.53569e-05!10165-103B3;0.9914!10499-107C4;0.986252!10408-106B3;0.0547743!10019-101D1;0.133736!10068-101I5;4.10152e-06!10075-102A3;0.00430102!10077-102A5;5.61902e-05!10727-110A7;0.000444088!10775-110G1;0.00214126!10412-106B7;0.000127869!12231-129F8;0.755823!12232-129F9;0.225499!12233-129G1;0.112432!12234-129G2;0.189472!10414-106B9;0.858397!10170-103B8;6.39597e-05!10183-103D3;0.230956!10150-102I6;0.399174!10174-103C3;0.698137!10155-103A2;0.787462!10038-101F2;0.581325!10838-111E1;0.378728!10759-110E3;3.31112e-07!10514-107E1;0.0892827!10465-106H6;0.000735824!10691-109F7;0.0161984!10843-111E6;0.806019!10844-111E7;0.000896463!11747-123G1;0.00388325!11748-123G2;0.483769!11749-123G3;0.870223!11750-123G4;0.632052!11751-123G5;0.510683!11840-124H4;0.679624!11752-123G6;0.774042!11753-123G7;0.302608!11754-123G8;0.822929!11755-123G9;0.529811!11756-123H1;0.107325!11833-124G6;0.971611!11760-123H5;0.294946!11836-124G9;0.934376!11758-123H3;0.680926!11835-124G8;0.377626!11762-123H7;0.0119591!11838-124H2;0.0628761!11757-123H2;0.0187586!11759-123H4;0.550491!11761-123H6;0.391733!11842-124H6;0.163435!11837-124H1;0.966834!10568-108B1;0.0124364!13230-141I8;0.3975!13231-141I9;0.636545!10696-109G3;0.507419!10493-107B7;0.425552!10494-107B8;0.305845!10850-111F4;0.606114!10851-111F5;0.000403642!10852-111F6;0.47877!10853-111F7;0.224612!10854-111F8;0.0539273!10855-111F9;0.123881!10856-111G1;0.0114193!10847-111F1;0.597454!10846-111E9;0.201502!10848-111F2;0.894688!10845-111E8;0.0551645!10857-111G2;0.0124658!10858-111G3;0.00527895!10156-103A3;0.0778744!11901-125F2;0.860408!11902-125F3;0.596542!11903-125F4;0.90713!10689-109F5;0.646038!10648-109A9;0.0126812!10784-110H1;8.30132e-05!10744-110C6;0.649811!10772-110F7;0.374616!10474-106I6;0.0010614!10600-108E6;0.0429902!10684-109E9;0.046383!12226-129F3;0.00443279!12227-129F4;0.930882!10508-107D4;0.000944733!10539-107G8;4.99857e-08!10607-108F4;0.00130517!10555-107I6;0.000176111!10774-110F9;0.000290978!10637-108I7;0.000149771!10663-109C6;7.45876e-05!10728-110A8;9.02836e-05!10729-110A9;9.38426e-05!10430-106D7;0.662156!10730-110B1;1.90927e-07!10813-111B3;8.23915e-06!10812-111B2;0.986805!10037-101F1;0.143322!10172-103C1;0.714764!10163-103B1;0.141611!10076-102A4;0.785274!10073-102A1;0.436255!10036-101E9;0.086732!10195-103E6;0.811902!10277-104E7;0.880885!10434-106E2;0.753585!10550-107I1;0.503729!10545-107H5;0.111458!10544-107H4;0.298578!10704-109H2;0.295319!10510-107D6;0.713297!10558-107I9;0.000681893!10020-101D2;0.187036!10732-110B3;0.0620758!10049-101G4;1.43473e-05!10698-109G5;0.00260551!10437-106E5;0.169003!10417-106C3;0.179124!10035-101E8;0.0380783!10171-103B9;0.59472!10157-103A4;0.223855!10034-101E7;0.721457!10072-101I9;0.677925!10199-103F1;0.114532!10200-103F2;0.00449748!10697-109G4;8.1704e-05!10723-110A3;6.39773e-05!10179-103C8;0.353272!10160-103A7;0.634304!10180-103C9;0.142223!10162-103A9;0.62097!10021-101D3;0.3438!10840-111E3;2.75198e-10!10706-109H4;0.00316574!10033-101E6;0.931591!10032-101E5;0.801083!10490-107B4;0.760596!10439-106E7;0.0529646!10022-101D4;0.240707!10176-103C5;0.000192158!10469-106I1;0.597355!10067-101I4;0.699566!10411-106B6;0.00887826!10471-106I3;0.953953!10030-101E3;0.320283!10475-106I7;0.0467167!10787-110H4;1.43505e-06!10477-106I9;1.78038e-05!10695-109G2;0.0128801!11771-123I7;0.145378!11772-123I8;0.229603!11773-123I9;0.161653!10093-102C3;0.055039!10442-106F1;0.000227245!10442-106F1;0.0180439!10201-103F3;0.0141453!10639-108I9;0.0139135!11843-124H7;0.896513!11841-124H5;0.00365534!10693-109F9;9.31602e-06!10436-106E4;0.810174!10483-107A6;0.953841!10282-104F3;0.0497107!10023-101D5;0.0250758!10066-101I3;0.0034441!10065-101I2;0.0145383!10800-110I8;0.000193282!10610-108F7;0.0001714!10841-111E4;0.0166237!10541-107H1;4.46775e-07!10842-111E5;2.01969e-05!10562-108A4;4.11921e-06!10024-101D6;0.0110751!10064-101I1;1.6472e-09!10609-108F6;1.77352e-06!10048-101G3;0.00300857!10781-110G7;0.0254603!10181-103D1;0.003077!10159-103A6;0.831688!10056-101H2;0.823105!10737-110B8;0.197616!10025-101D7;0.864403!10044-101F8;2.14969e-06!10424-106D1;3.74969e-06!10463-106H4;0.0014591!10616-108G4;0.3124!10486-107A9;0.263495!10062-101H8;0.012381!10202-103F4;0.000126667!10158-103A5;8.77687e-06!10441-106E9;0.548829!10031-101E4;7.34173e-05!10063-101H9;0.940708!10063-101H9;0.18688!11763-123H8;5.68886e-06!11765-123I1;0.115437!11768-123I4;0.0706993!10807-111A6;0.0213768!10790-110H7;0.0375914!10798-110I6;0.0315634!10786-110H3;0.243576!10591-108D6;0.68615!10593-108D8;0.0118982!10590-108D5;0.417426!10026-101D8;0.0798771!10096-102C6;0.0849675!10168-103B6;0.169831!10154-103A1;0.64503!10209-103G2;0.95812!10061-101H7;8.66438e-08!10027-101D9;0.00390198!10043-101F7;0.205566!10783-110G9;0.127859!10028-101E1;0.00225526!10060-101H6;0.0240248!10203-103F5;0.0183942!10059-101H5;5.7909e-07!10047-101G2;1.10492e-05!10029-101E2;2.12456e-09!10058-101H4;2.93621e-07!10418-106C4;0.000769008!10492-107B6;0.341902!10694-109G1;0.0100433!10797-110I5;0.468291!10057-101H3;0.992787!10100-102D1;2.03432e-05!10055-101H1;0.016576!10204-103F6;0.00107401!10191-103E2;0.00894011!10563-108A5;9.85934e-05
|name=CNhs10632_bl_f0
|name=CNhs10632_bl_f0
|tomtom_result=Klf4#MA0039.2;0;4.08602e-05;0.0194494;0.0211094;10;GGGGAGGGGGGG;TGGGTGGGGC;+!SP1#MA0079.2;1;4.47366e-05;0.0212946;0.0211094;9;GGGGAGGGGGGG;GGGGGCGGGG;-!INSM1#MA0155.1;0;0.00026956;0.128311;0.0847963;12;GGGGAGGGGGGG;TGTCAGGGGGCG;+!Pax4#MA0068.1;0;0.000676526;0.322026;0.159613;12;GGGGAGGGGGGG;GGGGGGGGAGTGGAGTATTGGAAATTTTTC;-!YML081W#MA0431.1;-1;0.00128661;0.612428;0.225591;9;GGGGAGGGGGGG;GTGCGGGGT;-!YGR067C#MA0425.1;4;0.00161499;0.768736;0.225591;10;GGGGAGGGGGGG;TGAAAAAGTGGGGT;-!MZF1_5-13#MA0057.1;-2;0.00167331;0.796496;0.225591;10;GGGGAGGGGGGG;GGAGGGGGAA;+!RGM1#MA0366.1;-4;0.00258183;1.22895;0.300443;5;GGGGAGGGGGGG;AGGGG;+!MSN4#MA0342.1;-4;0.00286524;1.36386;0.300443;5;GGGGAGGGGGGG;AGGGG;+!SP1#MA0079.2;1;0.00402792;1.91729;0.332189;9;GGGGAGGGGGGG;GGGGCGGGGT;+!YPR022C#MA0436.1;-2;0.00433406;2.06301;0.332189;7;GGGGAGGGGGGG;CGTGGGG;-!MSN2#MA0341.1;-4;0.00452232;2.15263;0.332189;5;GGGGAGGGGGGG;AGGGG;+!PPARG::RXRA#MA0065.2;3;0.004576;2.17817;0.332189;12;GGGGAGGGGGGG;GTAGGGCAAAGGTCA;+!RREB1#MA0073.1;0;0.00634745;3.02139;0.427872;12;GGGGAGGGGGGG;TGGGGGGGGGTGGTTTGGGG;-!MIG3#MA0339.1;-2;0.00800192;3.80891;0.483302;7;GGGGAGGGGGGG;TGCGGGG;-!Tal1::Gata1#MA0140.1;1;0.00819399;3.90034;0.483302;12;GGGGAGGGGGGG;CTGGTGGGGACAGATAAG;+!MIG1#MA0337.1;-3;0.00912434;4.34318;0.483602;7;GGGGAGGGGGGG;GCGGGGG;-!ADR1#MA0268.1;-3;0.00973642;4.63453;0.483602;7;GGGGAGGGGGGG;GTGGGGT;-!MIG2#MA0338.1;-2;0.00973642;4.63453;0.483602;7;GGGGAGGGGGGG;TGCGGGG;-!Trl#MA0205.1;-1;0.0122852;5.84777;0.57969;10;GGGGAGGGGGGG;GAGAGAGCAA;-!MZF1_1-4#MA0056.1;-4;0.0136871;6.51505;0.615083;6;GGGGAGGGGGGG;TGGGGA;+!Zfx#MA0146.1;1;0.016173;7.69833;0.69376;12;GGGGAGGGGGGG;CAGGCCTCGGCCCC;-!btd#MA0443.1;0;0.0182411;8.68275;0.748454;10;GGGGAGGGGGGG;AGGGGGCGGA;+!REI1#MA0364.1;-2;0.0203356;9.67974;0.774702;7;GGGGAGGGGGGG;TCAGGGG;-!AFT2#MA0270.1;0;0.0207538;9.87881;0.774702;8;GGGGAGGGGGGG;GGGGTGTG;-
}}
}}

Latest revision as of 13:21, 7 September 2012

Full Name: CNhs10632_bl_f0

Motif matrix
POACGT
11832.71046206141144.0204150077919331937.09761849848881931.6318008833125
22.63692123368095640.05702.8233752173340.0
335.549156350774540.05669.9111401002380.0
4772.17745170937172018.9288174234162889.92234453275824.431682785454253
53266.3124861561720.00.02439.1478102948345
60.00.05705.4602964510150.0
71814.19764085811934.1868542913542443626.423946053886260.65185524765207
81620.76369068003940.03792.848415135622291.84819063535366
9510.79782870203420.05194.6624677489750.0
101684.7546216258511740.1398820739571887.7759845173346392.78980823386183
111648.2118996002391665.24584039889711756.884149082537635.1184073693323
122085.4854974942336301.435814427432042849.3450593990833469.19392513025883

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Klf4#MA0039.204.08602e-050.01944940.021109410GGGGAGGGGGGGTGGGTGGGGC+
SP1#MA0079.214.47366e-050.02129460.02110949GGGGAGGGGGGGGGGGGCGGGG-
INSM1#MA0155.100.000269560.1283110.084796312GGGGAGGGGGGGTGTCAGGGGGCG+
Pax4#MA0068.100.0006765260.3220260.15961312GGGGAGGGGGGGGGGGGGGGAGTGGAGTATTGGAAATTTTTC-
YML081W#MA0431.1-10.001286610.6124280.2255919GGGGAGGGGGGGGTGCGGGGT-
YGR067C#MA0425.140.001614990.7687360.22559110GGGGAGGGGGGGTGAAAAAGTGGGGT-
MZF1_5-13#MA0057.1-20.001673310.7964960.22559110GGGGAGGGGGGGGGAGGGGGAA+
RGM1#MA0366.1-40.002581831.228950.3004435GGGGAGGGGGGGAGGGG+
MSN4#MA0342.1-40.002865241.363860.3004435GGGGAGGGGGGGAGGGG+
SP1#MA0079.210.004027921.917290.3321899GGGGAGGGGGGGGGGGCGGGGT+
YPR022C#MA0436.1-20.004334062.063010.3321897GGGGAGGGGGGGCGTGGGG-
MSN2#MA0341.1-40.004522322.152630.3321895GGGGAGGGGGGGAGGGG+
PPARG::RXRA#MA0065.230.0045762.178170.33218912GGGGAGGGGGGGGTAGGGCAAAGGTCA+
RREB1#MA0073.100.006347453.021390.42787212GGGGAGGGGGGGTGGGGGGGGGTGGTTTGGGG-
MIG3#MA0339.1-20.008001923.808910.4833027GGGGAGGGGGGGTGCGGGG-
Tal1::Gata1#MA0140.110.008193993.900340.48330212GGGGAGGGGGGGCTGGTGGGGACAGATAAG+
MIG1#MA0337.1-30.009124344.343180.4836027GGGGAGGGGGGGGCGGGGG-
ADR1#MA0268.1-30.009736424.634530.4836027GGGGAGGGGGGGGTGGGGT-
MIG2#MA0338.1-20.009736424.634530.4836027GGGGAGGGGGGGTGCGGGG-
Trl#MA0205.1-10.01228525.847770.5796910GGGGAGGGGGGGGAGAGAGCAA-
MZF1_1-4#MA0056.1-40.01368716.515050.6150836GGGGAGGGGGGGTGGGGA+
Zfx#MA0146.110.0161737.698330.6937612GGGGAGGGGGGGCAGGCCTCGGCCCC-
btd#MA0443.100.01824118.682750.74845410GGGGAGGGGGGGAGGGGGCGGA+
REI1#MA0364.1-20.02033569.679740.7747027GGGGAGGGGGGGTCAGGGG-
AFT2#MA0270.100.02075389.878810.7747028GGGGAGGGGGGGGGGGTGTG-
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