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MacroAPE 1083:3-TTTCGAAT: Difference between revisions

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120A2;0.0190094!11693-123A1;0.000351772!11292-117A5;0.000107571!11369-118A1;0.00479126!11441-118I1;0.10389!10007-101B4;0.105307!11520-119H8;4.5685e-08!11600-120H7;0.0197974!11681-122H7;0.0557829!11216-116B1;0.00960375!12179-129A1;0.0201291!12180-129A2;0.000164358!12181-129A3;3.77098e-05!12176-128I7;0.000733858!12177-128I8;5.46386e-05!12182-129A4;3.06459e-05!12183-129A5;4.33044e-05!12184-129A6;4.35e-05!10809-111A8;0.000639273!10597-108E3;0.00162912!10717-109I6;0.211007!10455-106G5;1.34e-12!10534-107G3;2.86205e-09!10429-106D6;3.68167e-10!10464-106H5;1.01572e-08!10827-111C8;2.70139e-07!10789-110H6;0.000310991!10828-111C9;2.35899e-06!10788-110H5;0.00294594!10792-110H9;0.00035389!10765-110E9;0.0152637!10829-111D1;0.000520851!10830-111D2;8.94517e-06!10831-111D3;0.234096!10832-111D4;0.000321374!10833-111D5;9.16774e-08!10764-110E8;2.6203e-05!10770-110F5;0.0168165!10399-106A3;0.0474228!10400-106A4;1.92e-05!10405-106A9;6.29884e-05!10834-111D6;9.76996e-06!10835-111D7;0.000338919!10836-111D8;5.44437e-05!10837-111D9;1.45046e-05!10699-109G6;0.00202124!10802-111A1;0.00017817!10796-110I4;0.000593018!10010-101C1;1.2121e-06!10810-111A9;1.34235e-09!10421-106C7;0.0258013!10708-109H6;2.53921e-06!12235-129G3;9.28144e-08!12236-129G4;0.0569957!12237-129G5;0.00553682!10167-103B5;0.00476002!10151-102I7;0.000674292!10428-106D5;0.00112826!10795-110I3;0.6453!10805-111A4;7.50695e-08!10052-101G7;0.000724856!10189-103D9;0.00019055!10589-108D4;0.746619!10425-106D2;0.00536525!10427-106D4;3.05849e-07!10702-109G9;2.42185e-08!10432-106D9;0.0466794!10496-107C1;3.13893e-09!10718-109I7;0.0825073!10011-101C2;6.00851e-05!10053-101G8;8.8219e-06!10686-109F2;0.00411219!10084-102B3;0.000336061!10012-101C3;0.00191751!10085-102B4;0.00132452!10482-107A5;0.0811229!10419-106C5;0.000702833!10080-102A8;0.00559667!10760-110E4;0.000561489!10709-109H7;4.78638e-08!10710-109H8;1.05875e-08!10703-109H1;2.43906e-08!10719-109I8;0.00487417!10642-109A3;1.87247e-05!10177-103C6;0.000345109!10164-103B2;0.0174383!10173-103C2;0.002706!10166-103B4;0.0259029!10083-102B2;0.0127173!10188-103D8;0.00549394!10552-107I3;0.000292613!10553-107I4;1.17951e-06!10013-101C4;0.0841011!10536-107G5;4.87517e-06!10618-108G6;0.453434!10423-106C9;4.00372e-05!10785-110H2;5.24355e-08!12238-129G6;3.70533e-12!12239-129G7;0.00661571!12240-129G8;0.577542!10416-106C2;7.45356e-06!10801-110I9;5.65573e-07!10766-110F1;4.14127e-05!10824-111C5;0.00626227!10825-111C6;0.000173259!10826-111C7;0.000268678!10454-106G4;0.00010375!10409-106B4;2.89886e-05!10638-108I8;0.000217555!10636-108I6;3.96539e-09!10513-107D9;1.2497e-07!10420-106C6;3.38872e-14!10082-102B1;2.55565e-06!10014-101C5;0.675863!10070-101I7;0.0149352!10452-106G2;0.282136!10453-106G3;0.000354231!10449-106F8;0.000333489!10042-101F6;9.64429e-05!10069-101I6;0.00273866!10193-103E4;0.000265799!10631-108I1;0.00514784!10438-106E6;3.36214e-11!10488-107B2;2.88673e-06!10196-103E7;6.91935e-05!10071-101I8;3.81926e-08!10071-101I8;0.00318139!10041-101F5;0.31358!10451-106G1;0.0575126!10450-106F9;3.1382e-05!10604-108F1;7.58076e-05!10605-108F2;3.06117e-06!10606-108F3;0.00436457!10603-108E9;6.96463e-05!10497-107C2;0.000195846!10448-106F7;0.0193833!10643-109A4;0.000933771!10426-106D3;0.000133994!10431-106D8;0.00290213!10197-103E8;2.82562e-07!10443-106F2;0.000184255!10815-111B5;0.00887412!10816-111B6;3.35437e-06!10817-111B7;1.13174e-06!10015-101C6;8.6115e-06!10410-106B5;0.004719!10054-101G9;0.504101!10758-110E2;0.00234752!10711-109H9;1.19673e-05!10040-101F4;6.90624e-12!10470-106I2;0.000758569!10415-106C1;9.79698e-05!10198-103E9;0.0720265!10614-108G2;0.00058927!10612-108F9;0.00128809!10549-107H9;0.000592112!10615-108G3;6.15892e-08!10487-107B1;0.160302!10433-106E1;0.180963!10688-109F4;0.208035!10444-106F3;0.313417!10444-106F3;3.249e-05!10485-107A8;1.86809e-05!10413-106B8;5.75533e-08!10175-103C4;0.293047!10161-103A8;0.0171297!12131-128D7;0.014766!10624-108H3;0.0348698!10712-109I1;9.19187e-05!10205-103F7;0.00226139!10206-103F8;1.08516e-06!10207-103F9;3.86326e-05!10050-101G5;1.411e-06!10051-101G6;0.186931!10016-101C7;6.88479e-05!10046-101G1;2.35083e-05!10778-110G4;0.0131345!10633-108I3;0.178985!10818-111B8;2.3529e-09!10819-111B9;1.98191e-06!10820-111C1;2.61233e-06!10484-107A7;9.30552e-07!10808-111A7;0.202288!10169-103B7;1.37369e-08!10153-102I9;0.00141196!13425-144D5;0.00243021!13433-144E4;3.69273e-13!13437-144E8;6.79545e-13!11904-125F5;1.35265e-13!11905-125F6;0.387124!10039-101F3;0.666408!10791-110H8;0.000394072!10017-101C8;0.00424663!10045-101F9;0.00018163!10509-107D5;0.125178!10839-111E2;0.487728!10692-109F8;0.321937!10079-102A7;0.00349934!10078-102A6;0.000166356!10721-110A1;0.000136611!10569-108B2;1.03835e-05!10570-108B3;0.015208!10571-108B4;0.0150976!10647-109A8;0.688851!10752-110D5;6.46574e-12!10782-110G8;0.0499468!10726-110A6;0.386013!10018-101C9;0.00229677!10086-102B5;7.59711e-11!10182-103D2;0.23904!10165-103B3;0.000768522!10499-107C4;0.000446016!10408-106B3;0.00478166!10019-101D1;0.000735118!10068-101I5;0.00209728!10075-102A3;9.92802e-05!10077-102A5;8.76369e-06!10727-110A7;0.00200314!10775-110G1;5.02333e-06!10412-106B7;5.91252e-07!12231-129F8;0.00419191!12232-129F9;2.65748e-18!12233-129G1;7.54161e-20!12234-129G2;2.88526e-20!10414-106B9;3.61388e-25!10170-103B8;0.0106556!10183-103D3;0.001943!10150-102I6;0.00691203!10174-103C3;0.00371108!10155-103A2;0.00189906!10038-101F2;0.00115237!10838-111E1;0.000291086!10759-110E3;0.021729!10514-107E1;4.49715e-11!10465-106H6;0.0240717!10691-109F7;0.934278!10843-111E6;0.674667!10844-111E7;0.0137032!11747-123G1;0.0978375!11748-123G2;0.68552!11749-123G3;0.420183!11750-123G4;0.219887!11751-123G5;0.0201647!11840-124H4;0.00221021!11752-123G6;0.000385509!11753-123G7;0.000809204!11754-123G8;0.0148989!11755-123G9;0.537253!11756-123H1;0.00725721!11833-124G6;0.09317!11760-123H5;8.73234e-06!11836-124G9;0.173457!11758-123H3;0.567121!11835-124G8;0.212637!11762-123H7;0.168917!11838-124H2;0.0465296!11757-123H2;0.055852!11759-123H4;0.0758147!11761-123H6;0.686118!11842-124H6;0.117226!11837-124H1;0.135892!10568-108B1;0.498104!13230-141I8;0.00281704!13231-141I9;0.231094!10696-109G3;0.223702!10493-107B7;0.186867!10494-107B8;0.0113146!10850-111F4;9.61969e-08!10851-111F5;0.000324026!10852-111F6;4.50606e-07!10853-111F7;0.00464555!10854-111F8;1.80015e-05!10855-111F9;0.00133447!10856-111G1;6.77925e-06!10847-111F1;4.03501e-05!10846-111E9;3.48257e-07!10848-111F2;1.13011e-07!10845-111E8;3.01898e-10!10857-111G2;2.75429e-05!10858-111G3;6.78856e-12!10156-103A3;8.67521e-06!11901-125F2;0.00541883!11902-125F3;0.0635703!11903-125F4;0.0327739!10689-109F5;0.0288231!10648-109A9;0.0197499!10784-110H1;7.42777e-07!10744-110C6;1.48954e-06!10772-110F7;0.00536378!10474-106I6;1.91566e-07!10600-108E6;0.117452!10684-109E9;8.98983e-10!12226-129F3;0.00528853!12227-129F4;8.33668e-05!10508-107D4;0.110624!10539-107G8;0.503784!10607-108F4;0.0335245!10555-107I6;0.00376344!10774-110F9;0.490823!10637-108I7;0.000454143!10663-109C6;0.0800366!10728-110A8;0.0435542!10729-110A9;8.12298e-05!10430-106D7;0.661905!10730-110B1;9.62716e-08!10813-111B3;0.0162574!10812-111B2;0.652224!10037-101F1;0.486153!10172-103C1;0.000317806!10163-103B1;0.00386444!10076-102A4;0.00437117!10073-102A1;0.000687108!10036-101E9;0.512398!10195-103E6;8.4314e-05!10277-104E7;0.00167301!10434-106E2;0.00205735!10550-107I1;0.0030072!10545-107H5;4.3485e-08!10544-107H4;0.00474431!10704-109H2;0.000382584!10510-107D6;0.0629012!10558-107I9;9.64799e-09!10020-101D2;0.0117727!10732-110B3;7.26806e-11!10049-101G4;0.00228521!10698-109G5;8.21108e-07!10437-106E5;6.44292e-07!10417-106C3;1.59552e-06!10035-101E8;0.00594689!10171-103B9;0.000181791!10157-103A4;0.0115113!10034-101E7;0.00354563!10072-101I9;0.000299277!10199-103F1;0.667829!10200-103F2;1.13546e-10!10697-109G4;2.53047e-05!10723-110A3;0.0295822!10179-103C8;0.000217226!10160-103A7;0.000695321!10180-103C9;0.00120109!10162-103A9;1.70577e-08!10021-101D3;1.44918e-06!10840-111E3;3.63879e-06!10706-109H4;1.39962e-09!10033-101E6;0.000271658!10032-101E5;0.000101067!10490-107B4;0.000180809!10439-106E7;1.26758e-09!10022-101D4;2.46798e-07!10176-103C5;3.19044e-07!10469-106I1;0.00647311!10067-101I4;0.000353434!10411-106B6;0.673058!10471-106I3;5.06463e-07!10030-101E3;0.146203!10475-106I7;8.78453e-05!10787-110H4;0.0122397!10477-106I9;0.0307383!10695-109G2;0.0144767!11771-123I7;0.0424088!11772-123I8;0.264102!11773-123I9;0.0621836!10093-102C3;0.014425!10442-106F1;6.29474e-09!10442-106F1;0.153952!10201-103F3;0.222596!10639-108I9;2.45073e-06!11843-124H7;0.00297848!11841-124H5;0.182549!10693-109F9;0.000195852!10436-106E4;0.0969255!10483-107A6;3.79772e-16!10282-104F3;3.23357e-05!10023-101D5;0.000242504!10066-101I3;2.10616e-05!10065-101I2;0.0333225!10800-110I8;0.0109284!10610-108F7;7.9214e-05!10841-111E4;0.00328794!10541-107H1;0.0376864!10842-111E5;5.08526e-06!10562-108A4;0.00367145!10024-101D6;0.0118334!10064-101I1;0.0106405!10609-108F6;0.877757!10048-101G3;0.598439!10781-110G7;1.32559e-05!10181-103D1;0.766923!10159-103A6;0.0176156!10056-101H2;0.012389!10737-110B8;0.169047!10025-101D7;0.220203!10044-101F8;0.0905287!10424-106D1;0.0799205!10463-106H4;0.000182514!10616-108G4;0.00234408!10486-107A9;0.115032!10062-101H8;0.56851!10202-103F4;0.137542!10158-103A5;2.65044e-08!10441-106E9;0.01016!10031-101E4;0.00113478!10063-101H9;0.000216295!10063-101H9;0.408952!11763-123H8;0.00738654!11765-123I1;0.821584!11768-123I4;0.0491655!10807-111A6;0.632418!10790-110H7;2.23031e-14!10798-110I6;3.76255e-10!10786-110H3;9.38905e-06!10591-108D6;2.453e-07!10593-108D8;3.44925e-09!10590-108D5;1.21407e-06!10026-101D8;2.68279e-12!10096-102C6;0.164563!10168-103B6;0.783599!10154-103A1;0.0022084!10209-103G2;0.00942719!10061-101H7;0.000688906!10027-101D9;0.0605399!10043-101F7;0.00253136!10783-110G9;0.157698!10028-101E1;0.000229402!10060-101H6;4.47217e-08!10203-103F5;1.27503e-05!10059-101H5;0.00242484!10047-101G2;0.000789322!10029-101E2;0.165021!10058-101H4;0.000530513!10418-106C4;0.0148379!10492-107B6;1.71742e-06!10694-109G1;1.58079e-06!10797-110I5;0.0712919!10057-101H3;0.780566!10100-102D1;0.0109418!10055-101H1;1.17388e-07!10204-103F6;0.43965!10191-103E2;6.84566e-06!10563-108A5;0.00622378
|name=3-TTTCGAAT,CNhs11282,BestGuess:PO2F2_si_HM09(0.691254770764022),T:190.0(20.43%),B:3484.4(7.65%),P:1e-34
|name=3-TTTCGAAT,CNhs11282,BestGuess:PO2F2_si_HM09(0.691254770764022),T:190.0(20.43%),B:3484.4(7.65%),P:1e-34
|tomtom_result=ARR1#MA0274.1;0;0.00877365;4.17626;1;8;TTTCGAAT;ATTCAAGT;-!mab-3#MA0262.1;4;0.00890401;4.23831;1;8;TTTCGAAT;AATGTTGCGAATT;+!XBP1#MA0414.1;0;0.00905956;4.31235;1;7;TTTCGAAT;CCTCGAG;-!STB4#MA0391.1;0;0.0129772;6.17717;1;7;TTTCGAAT;TTCCGAG;-!vnd#MA0253.1;0;0.0165824;7.89323;1;8;TTTCGAAT;TTTCAAGTG;+!CEBPA#MA0102.2;1;0.0187273;8.91418;1;8;TTTCGAAT;ATTGCGAAA;-
}}
}}

Latest revision as of 13:23, 7 September 2012

Full Name: 3-TTTCGAAT,CNhs11282,BestGuess:PO2F2_si_HM09(0.691254770764022),T:190.0(20.43%),B:3484.4(7.65%),P:1e-34

Motif matrix
POACGT
154.150.190.19135.47
20.190.190.19189.43
30.190.1941.61148.01
40.19189.430.190.19
554.910.19134.710.19
6189.430.190.190.19
7189.430.190.190.19
80.1913.110.19176.51

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
ARR1#MA0274.100.008773654.1762618TTTCGAATATTCAAGT-
mab-3#MA0262.140.008904014.2383118TTTCGAATAATGTTGCGAATT+
XBP1#MA0414.100.009059564.3123517TTTCGAATCCTCGAG-
STB4#MA0391.100.01297726.1771717TTTCGAATTTCCGAG-
vnd#MA0253.100.01658247.8932318TTTCGAATTTTCAAGTG+
CEBPA#MA0102.210.01872738.9141818TTTCGAATATTGCGAAA-
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