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MacroAPE 1083:Motif468: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;72843;0;0!02;16204;8119;10385;38135!03;0;0;72843;0!04;0;0;59265;13578!05;0;0;72843;0!06;0;0;0;72843!07;0;0;72843;0 |macroape_1083_sample...")
 
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108E3;2.30507e-05!10717-109I6;0.0042607!10455-106G5;0.25185!10534-107G3;0.442038!10429-106D6;0.0941184!10464-106H5;0.0505098!10827-111C8;0.121851!10789-110H6;0.805474!10828-111C9;0.906959!10788-110H5;0.534469!10792-110H9;0.229988!10765-110E9;0.586954!10829-111D1;0.792831!10830-111D2;0.701495!10831-111D3;0.55887!10832-111D4;0.566391!10833-111D5;0.789519!10764-110E8;0.346118!10770-110F5;0.276328!10399-106A3;0.490157!10400-106A4;0.364382!10405-106A9;0.349049!10834-111D6;0.29463!10835-111D7;0.95029!10836-111D8;0.312881!10837-111D9;0.246955!10699-109G6;0.680323!10802-111A1;0.298693!10796-110I4;0.586588!10010-101C1;0.87669!10810-111A9;0.0249492!10421-106C7;0.00243541!10708-109H6;0.451668!12235-129G3;0.0460817!12236-129G4;0.130147!12237-129G5;0.627998!10167-103B5;0.0901988!10151-102I7;0.619131!10428-106D5;0.616384!10795-110I3;0.447082!10805-111A4;0.340946!10052-101G7;1.95627e-05!10189-103D9;0.0932733!10589-108D4;0.0414984!10425-106D2;0.000376028!10427-106D4;0.0354161!10702-109G9;0.425846!10432-106D9;0.350478!10496-107C1;0.983719!10718-109I7;0.718048!10011-101C2;0.752016!10053-101G8;0.0300384!10686-109F2;0.000450782!10084-102B3;0.713719!10012-101C3;0.63464!10085-102B4;0.772109!10482-107A5;0.228177!10419-106C5;0.014004!10080-102A8;0.194057!10760-110E4;0.251075!10709-109H7;0.544109!10710-109H8;0.373952!10703-109H1;0.157743!10719-109I8;0.00163353!10642-109A3;0.00466782!10177-103C6;0.000135122!10164-103B2;0.636199!10173-103C2;0.576249!10166-103B4;0.400065!10083-102B2;0.365714!10188-103D8;0.395648!10552-107I3;0.804355!10553-107I4;0.60063!10013-101C4;0.630978!10536-107G5;0.0279305!10618-108G6;0.018307!10423-106C9;0.00449187!10785-110H2;0.0196938!12238-129G6;0.0533651!12239-129G7;0.0555316!12240-129G8;0.483709!10416-106C2;0.0945783!10801-110I9;0.871406!10766-110F1;0.852489!10824-111C5;0.718884!10825-111C6;0.272938!10826-111C7;0.240264!10454-106G4;0.265976!10409-106B4;0.298152!10638-108I8;0.946539!10636-108I6;0.202984!10513-107D9;0.258927!10420-106C6;0.0239891!10082-102B1;0.00353891!10014-101C5;0.0599081!10070-101I7;0.0638388!10452-106G2;0.142114!10453-106G3;0.00729341!10449-106F8;0.00914967!10042-101F6;0.00913116!10069-101I6;0.794752!10193-103E4;0.122583!10631-108I1;0.671591!10438-106E6;0.326236!10488-107B2;0.40231!10196-103E7;0.0220012!10071-101I8;0.17279!10071-101I8;0.138385!10041-101F5;0.297567!10451-106G1;0.11019!10450-106F9;0.000100857!10604-108F1;0.000388781!10605-108F2;0.0760139!10606-108F3;0.0954753!10603-108E9;0.140819!10497-107C2;0.247146!10448-106F7;0.0940684!10643-109A4;0.149381!10426-106D3;0.172624!10431-106D8;0.845384!10197-103E8;0.375938!10443-106F2;0.0660946!10815-111B5;0.754576!10816-111B6;0.353735!10817-111B7;0.313209!10015-101C6;0.34197!10410-106B5;0.0322389!10054-101G9;0.00833497!10758-110E2;0.610636!10711-109H9;0.350291!10040-101F4;0.0750683!10470-106I2;0.677699!10415-106C1;0.513299!10198-103E9;0.561966!10614-108G2;0.0375185!10612-108F9;0.441832!10549-107H9;0.772706!10615-108G3;0.000301386!10487-107B1;0.00195088!10433-106E1;0.896496!10688-109F4;0.0102746!10444-106F3;0.664869!10444-106F3;0.395336!10485-107A8;0.566895!10413-106B8;0.0151759!10175-103C4;0.00300204!10161-103A8;0.773282!12131-128D7;0.656373!10624-108H3;0.0589739!10712-109I1;0.419961!10205-103F7;0.961445!10206-103F8;0.119047!10207-103F9;0.115978!10050-101G5;0.194516!10051-101G6;0.276578!10016-101C7;0.121895!10046-101G1;0.157422!10778-110G4;0.363391!10633-108I3;0.336613!10818-111B8;0.000484844!10819-111B9;0.0103771!10820-111C1;0.0084339!10484-107A7;0.012327!10808-111A7;0.0236144!10169-103B7;0.286905!10153-102I9;0.769361!13425-144D5;0.636762!13433-144E4;1.34639e-06!13437-144E8;1.38757e-05!11904-125F5;1.63248e-05!11905-125F6;0.338524!10039-101F3;0.405532!10791-110H8;0.747375!10017-101C8;0.26982!10045-101F9;0.175722!10509-107D5;0.843874!10839-111E2;0.247387!10692-109F8;0.45812!10079-102A7;0.110489!10078-102A6;0.136512!10721-110A1;0.0828386!10569-108B2;0.0120276!10570-108B3;0.542516!10571-108B4;0.178563!10647-109A8;0.43685!10752-110D5;0.0214915!10782-110G8;0.717243!10726-110A6;0.40436!10018-101C9;0.000540728!10086-102B5;0.295948!10182-103D2;0.404543!10165-103B3;0.697378!10499-107C4;0.601385!10408-106B3;0.862817!10019-101D1;0.732865!10068-101I5;0.0452598!10075-102A3;0.16577!10077-102A5;0.0482157!10727-110A7;0.0597722!10775-110G1;0.436941!10412-106B7;0.409992!12231-129F8;0.861!12232-129F9;0.3208!12233-129G1;0.0599795!12234-129G2;0.132418!10414-106B9;0.427149!10170-103B8;0.0337386!10183-103D3;0.569962!10150-102I6;0.680592!10174-103C3;0.589444!10155-103A2;0.955782!10038-101F2;0.791832!10838-111E1;0.974358!10759-110E3;0.000539966!10514-107E1;0.0871626!10465-106H6;0.14237!10691-109F7;0.317767!10843-111E6;0.246516!10844-111E7;0.00206096!11747-123G1;0.0011379!11748-123G2;0.878487!11749-123G3;0.42287!11750-123G4;0.782946!11751-123G5;0.785337!11840-124H4;0.748176!11752-123G6;0.208721!11753-123G7;0.562273!11754-123G8;0.888439!11755-123G9;0.916949!11756-123H1;0.815198!11833-124G6;0.466928!11760-123H5;0.424121!11836-124G9;0.47216!11758-123H3;0.0755023!11835-124G8;0.272386!11762-123H7;0.0821556!11838-124H2;0.68073!11757-123H2;0.32962!11759-123H4;0.574917!11761-123H6;0.359509!11842-124H6;0.3679!11837-124H1;0.165538!10568-108B1;0.103016!13230-141I8;0.56819!13231-141I9;0.181176!10696-109G3;0.189052!10493-107B7;0.530467!10494-107B8;0.0928305!10850-111F4;0.000246531!10851-111F5;0.00217718!10852-111F6;0.285622!10853-111F7;0.236201!10854-111F8;0.227242!10855-111F9;0.630766!10856-111G1;0.507731!10847-111F1;0.11174!10846-111E9;0.0213703!10848-111F2;0.0867603!10845-111E8;0.0409088!10857-111G2;0.107818!10858-111G3;0.109234!10156-103A3;0.0169486!11901-125F2;0.626618!11902-125F3;0.24472!11903-125F4;0.280783!10689-109F5;0.194661!10648-109A9;0.00220244!10784-110H1;0.0690838!10744-110C6;0.849892!10772-110F7;0.695448!10474-106I6;0.33849!10600-108E6;0.860121!10684-109E9;0.398047!12226-129F3;0.0747848!12227-129F4;0.453672!10508-107D4;0.0178172!10539-107G8;0.00225898!10607-108F4;0.038741!10555-107I6;0.000409256!10774-110F9;0.00351147!10637-108I7;0.00750545!10663-109C6;0.000616886!10728-110A8;7.16567e-05!10729-110A9;0.00321103!10430-106D7;0.805713!10730-110B1;0.00528597!10813-111B3;0.00535947!10812-111B2;0.182779!10037-101F1;0.285722!10172-103C1;0.709709!10163-103B1;0.641349!10076-102A4;0.668488!10073-102A1;0.628388!10036-101E9;0.213562!10195-103E6;0.665248!10277-104E7;0.663797!10434-106E2;0.594228!10550-107I1;0.21799!10545-107H5;0.0363794!10544-107H4;0.971154!10704-109H2;0.597419!10510-107D6;0.728032!10558-107I9;0.00725102!10020-101D2;0.0134194!10732-110B3;0.17374!10049-101G4;0.0767657!10698-109G5;0.88069!10437-106E5;0.0315145!10417-106C3;0.0422447!10035-101E8;0.640798!10171-103B9;0.681108!10157-103A4;0.643333!10034-101E7;0.677125!10072-101I9;0.681513!10199-103F1;0.206142!10200-103F2;0.203943!10697-109G4;0.0189359!10723-110A3;0.025185!10179-103C8;0.390686!10160-103A7;0.701643!10180-103C9;0.626007!10162-103A9;0.476362!10021-101D3;0.540415!10840-111E3;0.0955039!10706-109H4;0.500723!10033-101E6;0.391695!10032-101E5;0.762272!10490-107B4;0.697552!10439-106E7;0.0318675!10022-101D4;0.549926!10176-103C5;0.0572921!10469-106I1;0.567017!10067-101I4;0.581411!10411-106B6;0.992853!10471-106I3;0.957381!10030-101E3;0.219084!10475-106I7;0.391409!10787-110H4;0.000584697!10477-106I9;0.0530454!10695-109G2;0.020724!11771-123I7;0.663253!11772-123I8;0.812811!11773-123I9;0.761723!10093-102C3;0.979567!10442-106F1;0.0495138!10442-106F1;0.131545!10201-103F3;0.194071!10639-108I9;0.106842!11843-124H7;0.855702!11841-124H5;0.273927!10693-109F9;0.377813!10436-106E4;0.0018942!10483-107A6;0.909736!10282-104F3;0.610559!10023-101D5;0.0357136!10066-101I3;0.0651438!10065-101I2;0.560721!10800-110I8;0.092745!10610-108F7;0.000444786!10841-111E4;0.000994943!10541-107H1;0.000195363!10842-111E5;0.00558614!10562-108A4;4.65345e-06!10024-101D6;0.0010635!10064-101I1;0.0391624!10609-108F6;0.28069!10048-101G3;0.035107!10781-110G7;0.0695882!10181-103D1;0.0128435!10159-103A6;0.806429!10056-101H2;0.827764!10737-110B8;0.857583!10025-101D7;0.740588!10044-101F8;0.0180784!10424-106D1;0.127351!10463-106H4;0.414683!10616-108G4;0.346874!10486-107A9;0.247383!10062-101H8;0.471606!10202-103F4;0.312878!10158-103A5;0.0497588!10441-106E9;0.906146!10031-101E4;0.000157229!10063-101H9;0.705901!10063-101H9;0.188629!11763-123H8;0.111306!11765-123I1;0.770692!11768-123I4;0.26367!10807-111A6;0.291065!10790-110H7;3.23651e-06!10798-110I6;0.00014118!10786-110H3;3.12754e-05!10591-108D6;1.57085e-05!10593-108D8;3.07089e-05!10590-108D5;0.00376803!10026-101D8;0.000535327!10096-102C6;0.422011!10168-103B6;0.197357!10154-103A1;0.703733!10209-103G2;0.656916!10061-101H7;0.0190736!10027-101D9;0.273053!10043-101F7;0.651855!10783-110G9;0.218131!10028-101E1;0.169043!10060-101H6;0.282429!10203-103F5;0.504314!10059-101H5;0.00494202!10047-101G2;0.0426485!10029-101E2;0.00750689!10058-101H4;0.0255059!10418-106C4;0.270237!10492-107B6;0.0701872!10694-109G1;0.00339593!10797-110I5;0.312803!10057-101H3;0.9575!10100-102D1;0.101045!10055-101H1;0.121897!10204-103F6;0.35216!10191-103E2;0.217068!10563-108A5;0.0395063
|name=motif468
|name=motif468
|tomtom_result=RAP1#MA0359.1;3;0.00266739;1.26968;0.741102;7;CTGGGTG;TGTATGGGTG;-!ESR1#MA0112.2;4;0.00309659;1.47398;0.741102;7;CTGGGTG;AGGTCAGGGTGACCTGGGCC;-!AFT2#MA0270.1;-1;0.00381426;1.81559;0.741102;6;CTGGGTG;GGGGTGTG;-!T#MA0009.1;0;0.00436756;2.07896;0.741102;7;CTGGGTG;CTAGGTGTGAA;+!Klf4#MA0039.2;-1;0.0045357;2.15899;0.741102;6;CTGGGTG;TGGGTGGGGC;+!CREB1#MA0018.1;0;0.00467693;2.22622;0.741102;7;CTGGGTG;CCTGGTGACGTC;+!Zfp423#MA0116.1;6;0.00556995;2.6513;0.756521;7;CTGGGTG;GCACCCCTGGGTGCC;-!AFT1#MA0269.1;4;0.0064187;3.0553;0.762825;7;CTGGGTG;CCAATCGGGTGCAATATGTAA;-!Arnt::Ahr#MA0006.1;-1;0.00761642;3.62542;0.804593;6;CTGGGTG;TGCGTG;+!SP1#MA0079.1;4;0.00937169;4.46093;0.891017;6;CTGGGTG;GGGGCGGGGT;+!REST#MA0138.2;8;0.0122531;5.83248;0.998691;7;CTGGGTG;GCGCTGTCCATGGTGCTGA;+!ESR1#MA0112.2;5;0.0131029;6.23698;0.998691;7;CTGGGTG;GGGGTCACGGTGACCTGG;-!TLX1::NFIC#MA0119.1;4;0.014493;6.89868;0.998691;7;CTGGGTG;TTGGCATGGTGCCA;-!INSM1#MA0155.1;3;0.0148979;7.09138;0.998691;7;CTGGGTG;TGTCAGGGGGCG;+!ZEB1#MA0103.1;-1;0.0164074;7.8099;0.998691;6;CTGGGTG;CAGGTG;-!REST#MA0138.2;9;0.0170804;8.13027;0.998691;7;CTGGGTG;GGCGCTGTCCATGGTGCTGAA;-!Macho-1#MA0118.1;-1;0.0179193;8.5296;0.998691;6;CTGGGTG;TGGGGGGTC;+
}}
}}

Latest revision as of 13:26, 7 September 2012

Full Name: motif468

Motif matrix
POACGT
0107284300
021620481191038538135
0300728430
04005926513578
0500728430
0600072843
0700728430

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
RAP1#MA0359.130.002667391.269680.7411027CTGGGTGTGTATGGGTG-
ESR1#MA0112.240.003096591.473980.7411027CTGGGTGAGGTCAGGGTGACCTGGGCC-
AFT2#MA0270.1-10.003814261.815590.7411026CTGGGTGGGGGTGTG-
T#MA0009.100.004367562.078960.7411027CTGGGTGCTAGGTGTGAA+
Klf4#MA0039.2-10.00453572.158990.7411026CTGGGTGTGGGTGGGGC+
CREB1#MA0018.100.004676932.226220.7411027CTGGGTGCCTGGTGACGTC+
Zfp423#MA0116.160.005569952.65130.7565217CTGGGTGGCACCCCTGGGTGCC-
AFT1#MA0269.140.00641873.05530.7628257CTGGGTGCCAATCGGGTGCAATATGTAA-
Arnt::Ahr#MA0006.1-10.007616423.625420.8045936CTGGGTGTGCGTG+
SP1#MA0079.140.009371694.460930.8910176CTGGGTGGGGGCGGGGT+
REST#MA0138.280.01225315.832480.9986917CTGGGTGGCGCTGTCCATGGTGCTGA+
ESR1#MA0112.250.01310296.236980.9986917CTGGGTGGGGGTCACGGTGACCTGG-
TLX1::NFIC#MA0119.140.0144936.898680.9986917CTGGGTGTTGGCATGGTGCCA-
INSM1#MA0155.130.01489797.091380.9986917CTGGGTGTGTCAGGGGGCG+
ZEB1#MA0103.1-10.01640747.80990.9986916CTGGGTGCAGGTG-
REST#MA0138.290.01708048.130270.9986917CTGGGTGGGCGCTGTCCATGGTGCTGAA-
Macho-1#MA0118.1-10.01791938.52960.9986916CTGGGTGTGGGGGGTC+
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MacroAPE_1083:Motif468&oldid=2134000"