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MacroAPE 1083:Motif CANGTT: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;608;0;0!02;608;0;0;0!03;152;152;152;152!04;0;0;608;0!05;0;0;0;608!06;0;0;0;608 |macroape_1083_sample_pvalues=11376-118A8;0.477842!11327-...")
 
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7-111C8;0.568016!10789-110H6;0.718604!10828-111C9;0.638418!10788-110H5;0.620505!10792-110H9;0.538846!10765-110E9;0.440007!10829-111D1;0.35044!10830-111D2;0.324682!10831-111D3;0.397145!10832-111D4;0.369943!10833-111D5;0.458451!10764-110E8;0.292672!10770-110F5;0.202439!10399-106A3;0.467116!10400-106A4;0.15806!10405-106A9;0.183708!10834-111D6;0.162419!10835-111D7;0.325765!10836-111D8;0.7615!10837-111D9;0.173144!10699-109G6;0.776834!10802-111A1;0.355979!10796-110I4;0.954237!10010-101C1;0.326445!10810-111A9;0.791187!10421-106C7;0.890698!10708-109H6;0.877556!12235-129G3;0.493995!12236-129G4;0.325372!12237-129G5;0.231383!10167-103B5;0.383712!10151-102I7;0.859267!10428-106D5;0.735072!10795-110I3;0.008817!10805-111A4;0.828135!10052-101G7;0.931351!10189-103D9;0.983526!10589-108D4;0.416359!10425-106D2;0.573365!10427-106D4;0.527843!10702-109G9;0.797934!10432-106D9;0.19498!10496-107C1;0.148792!10718-109I7;0.170111!10011-101C2;0.302263!10053-101G8;0.538278!10686-109F2;0.638183!10084-102B3;0.367548!10012-101C3;0.704613!10085-102B4;0.597471!10482-107A5;0.639807!10419-106C5;0.180699!10080-102A8;0.0836056!10760-110E4;0.782023!10709-109H7;0.0107369!10710-109H8;0.0562896!10703-109H1;0.32315!10719-109I8;0.490122!10642-109A3;0.0667818!10177-103C6;0.83805!10164-103B2;0.711668!10173-103C2;0.842372!10166-103B4;0.865849!10083-102B2;0.803612!10188-103D8;0.759726!10552-107I3;0.66792!10553-107I4;0.0739663!10013-101C4;0.000192027!10536-107G5;0.381911!10618-108G6;0.560893!10423-106C9;0.688448!10785-110H2;0.80605!12238-129G6;0.828761!12239-129G7;0.696216!12240-129G8;0.736705!10416-106C2;0.638802!10801-110I9;0.597246!10766-110F1;0.931806!10824-111C5;0.894041!10825-111C6;0.8263!10826-111C7;0.772547!10454-106G4;0.880704!10409-106B4;0.728328!10638-108I8;0.918804!10636-108I6;0.876801!10513-107D9;0.0105453!10420-106C6;0.757171!10082-102B1;0.0030323!10014-101C5;0.0630134!10070-101I7;0.304643!10452-106G2;0.245089!10453-106G3;0.593195!10449-106F8;0.557092!10042-101F6;0.524505!10069-101I6;0.478573!10193-103E4;0.405481!10631-108I1;0.63598!10438-106E6;0.837568!10488-107B2;0.0506157!10196-103E7;0.319345!10071-101I8;0.026636!10071-101I8;0.471621!10041-101F5;0.988081!10451-106G1;0.873523!10450-106F9;0.422657!10604-108F1;0.124289!10605-108F2;0.782767!10606-108F3;0.462235!10603-108E9;0.849481!10497-107C2;0.344226!10448-106F7;0.489185!10643-109A4;0.103066!10426-106D3;0.486876!10431-106D8;0.16245!10197-103E8;0.104942!10443-106F2;0.296405!10815-111B5;0.0134666!10816-111B6;0.292778!10817-111B7;0.128773!10015-101C6;0.285381!10410-106B5;0.243914!10054-101G9;0.944155!10758-110E2;0.905716!10711-109H9;0.62541!10040-101F4;0.654749!10470-106I2;0.837604!10415-106C1;0.0634489!10198-103E9;0.538676!10614-108G2;0.362606!10612-108F9;0.012963!10549-107H9;0.21038!10615-108G3;0.629864!10487-107B1;0.647001!10433-106E1;0.607738!10688-109F4;0.686319!10444-106F3;0.140318!10444-106F3;0.282898!10485-107A8;0.315831!10413-106B8;0.499477!10175-103C4;0.874851!10161-103A8;0.535113!12131-128D7;0.467761!10624-108H3;0.079594!10712-109I1;0.245608!10205-103F7;0.658647!10206-103F8;0.79435!10207-103F9;0.970878!10050-101G5;0.60903!10051-101G6;0.686519!10016-101C7;0.9734!10046-101G1;0.93248!10778-110G4;0.817861!10633-108I3;0.256562!10818-111B8;0.418371!10819-111B9;0.674554!10820-111C1;0.732981!10484-107A7;0.629261!10808-111A7;0.290853!10169-103B7;0.719522!10153-102I9;0.591355!13425-144D5;0.709512!13433-144E4;0.501535!13437-144E8;0.354554!11904-125F5;0.364485!11905-125F6;0.407217!10039-101F3;0.69374!10791-110H8;0.783162!10017-101C8;0.192759!10045-101F9;0.471761!10509-107D5;0.875085!10839-111E2;0.213078!10692-109F8;0.844825!10079-102A7;0.400184!10078-102A6;0.944038!10721-110A1;0.991123!10569-108B2;0.231079!10570-108B3;0.736141!10571-108B4;0.531043!10647-109A8;0.527068!10752-110D5;0.716066!10782-110G8;0.893785!10726-110A6;0.511703!10018-101C9;0.615013!10086-102B5;0.603094!10182-103D2;0.908856!10165-103B3;0.318107!10499-107C4;0.365147!10408-106B3;0.330146!10019-101D1;0.677082!10068-101I5;0.430731!10075-102A3;0.102704!10077-102A5;0.160838!10727-110A7;0.411242!10775-110G1;0.937761!10412-106B7;0.506019!12231-129F8;0.00385261!12232-129F9;0.93099!12233-129G1;0.768632!12234-129G2;0.897155!10414-106B9;0.741863!10170-103B8;0.01332!10183-103D3;0.670912!10150-102I6;0.712639!10174-103C3;0.747574!10155-103A2;0.384148!10038-101F2;0.431233!10838-111E1;0.425182!10759-110E3;0.505937!10514-107E1;0.0607699!10465-106H6;0.886249!10691-109F7;0.735538!10843-111E6;0.648416!10844-111E7;0.447447!11747-123G1;0.817569!11748-123G2;0.196567!11749-123G3;0.189714!11750-123G4;0.798883!11751-123G5;0.527605!11840-124H4;0.796878!11752-123G6;0.858162!11753-123G7;0.659296!11754-123G8;0.483832!11755-123G9;0.0539247!11756-123H1;0.0613868!11833-124G6;0.580036!11760-123H5;0.565864!11836-124G9;0.405914!11758-123H3;0.564451!11835-124G8;0.322538!11762-123H7;0.994977!11838-124H2;0.582694!11757-123H2;0.959157!11759-123H4;0.794668!11761-123H6;0.305031!11842-124H6;0.911559!11837-124H1;0.556519!10568-108B1;0.975314!13230-141I8;0.1978!13231-141I9;0.273795!10696-109G3;0.281185!10493-107B7;0.99977!10494-107B8;0.557396!10850-111F4;0.556684!10851-111F5;0.214428!10852-111F6;0.352219!10853-111F7;0.436594!10854-111F8;0.999405!10855-111F9;0.270637!10856-111G1;0.556329!10847-111F1;0.427778!10846-111E9;0.472493!10848-111F2;0.720813!10845-111E8;0.535468!10857-111G2;0.78386!10858-111G3;0.861165!10156-103A3;0.674429!11901-125F2;0.763018!11902-125F3;0.136077!11903-125F4;0.110579!10689-109F5;0.225083!10648-109A9;0.309111!10784-110H1;0.190504!10744-110C6;0.964199!10772-110F7;0.779368!10474-106I6;0.0771604!10600-108E6;0.887694!10684-109E9;0.614666!12226-129F3;0.341329!12227-129F4;0.871277!10508-107D4;0.16637!10539-107G8;0.517181!10607-108F4;0.597329!10555-107I6;0.638172!10774-110F9;0.374508!10637-108I7;0.647594!10663-109C6;0.360771!10728-110A8;0.769206!10729-110A9;0.369998!10430-106D7;0.468642!10730-110B1;0.0675639!10813-111B3;0.380398!10812-111B2;0.292963!10037-101F1;0.50401!10172-103C1;0.810091!10163-103B1;0.701195!10076-102A4;0.735981!10073-102A1;0.769575!10036-101E9;0.823055!10195-103E6;0.695924!10277-104E7;0.802131!10434-106E2;0.587959!10550-107I1;0.051545!10545-107H5;0.0236447!10544-107H4;0.0142478!10704-109H2;0.410881!10510-107D6;0.582198!10558-107I9;0.0774934!10020-101D2;0.214098!10732-110B3;0.984953!10049-101G4;0.534662!10698-109G5;0.395077!10437-106E5;0.471981!10417-106C3;0.0374505!10035-101E8;0.945344!10171-103B9;0.783081!10157-103A4;0.587758!10034-101E7;0.760685!10072-101I9;0.732152!10199-103F1;0.821336!10200-103F2;0.00783598!10697-109G4;0.537639!10723-110A3;0.748306!10179-103C8;0.000164903!10160-103A7;0.212338!10180-103C9;0.336152!10162-103A9;0.618855!10021-101D3;0.912068!10840-111E3;0.986967!10706-109H4;0.832887!10033-101E6;0.115746!10032-101E5;0.528718!10490-107B4;0.736562!10439-106E7;0.938408!10022-101D4;0.0132892!10176-103C5;0.19485!10469-106I1;0.711663!10067-101I4;0.736081!10411-106B6;0.406573!10471-106I3;0.0350047!10030-101E3;0.137354!10475-106I7;0.759549!10787-110H4;0.985228!10477-106I9;0.822724!10695-109G2;0.347288!11771-123I7;0.55792!11772-123I8;0.0337167!11773-123I9;0.08483!10093-102C3;0.200061!10442-106F1;0.0177676!10442-106F1;0.79192!10201-103F3;0.738119!10639-108I9;0.090123!11843-124H7;0.153119!11841-124H5;0.854649!10693-109F9;0.350053!10436-106E4;0.115306!10483-107A6;0.565048!10282-104F3;0.384596!10023-101D5;0.591541!10066-101I3;0.721529!10065-101I2;0.439429!10800-110I8;0.20019!10610-108F7;0.909992!10841-111E4;0.918282!10541-107H1;0.708126!10842-111E5;0.0014711!10562-108A4;0.543878!10024-101D6;0.134607!10064-101I1;0.300061!10609-108F6;0.452946!10048-101G3;0.043022!10781-110G7;0.41899!10181-103D1;0.422545!10159-103A6;0.363957!10056-101H2;0.496929!10737-110B8;0.805715!10025-101D7;0.62636!10044-101F8;0.952135!10424-106D1;0.654563!10463-106H4;0.889798!10616-108G4;0.0281318!10486-107A9;0.306968!10062-101H8;0.358547!10202-103F4;0.271278!10158-103A5;0.0332042!10441-106E9;0.36525!10031-101E4;0.624366!10063-101H9;0.693454!10063-101H9;0.872143!11763-123H8;0.508938!11765-123I1;0.226311!11768-123I4;0.50917!10807-111A6;0.408357!10790-110H7;0.93229!10798-110I6;0.367754!10786-110H3;0.216965!10591-108D6;0.879672!10593-108D8;0.713466!10590-108D5;0.253055!10026-101D8;0.740964!10096-102C6;0.155732!10168-103B6;0.160627!10154-103A1;0.393506!10209-103G2;0.634794!10061-101H7;0.426874!10027-101D9;0.106444!10043-101F7;0.282552!10783-110G9;0.167069!10028-101E1;0.0821964!10060-101H6;0.153075!10203-103F5;0.132887!10059-101H5;0.454758!10047-101G2;0.393397!10029-101E2;0.257825!10058-101H4;0.365361!10418-106C4;0.162816!10492-107B6;0.0155618!10694-109G1;0.0277955!10797-110I5;0.941146!10057-101H3;0.229427!10100-102D1;0.692495!10055-101H1;0.408083!10204-103F6;0.406307!10191-103E2;0.410436!10563-108A5;0.498099
|name=motif_CANGTT
|name=motif_CANGTT
|tomtom_result=Arnt#MA0004.1;0;0.0108797;5.17873;1;6;CAAGTT;CACGTG;-!sna#MA0086.1;0;0.019421;9.2444;1;6;CAAGTT;CAGGTG;+!ESR2#MA0258.1;6;0.0198622;9.4544;1;6;CAAGTT;CAAGGTCACGGTGACCTG;+
}}
}}

Latest revision as of 13:47, 7 September 2012

Full Name: motif_CANGTT

Motif matrix
POACGT
01060800
02608000
03152152152152
04006080
05000608
06000608

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Arnt#MA0004.100.01087975.1787316CAAGTTCACGTG-
sna#MA0086.100.0194219.244416CAAGTTCAGGTG+
ESR2#MA0258.160.01986229.454416CAAGTTCAAGGTCACGGTGACCTG+
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