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MacroAPE 1083:CNhs12851 bu f0: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;830.1677070483778;790.8267461646977;135.9830420956831;245.3751376638482!2;959.9476234873592;246.63536151632658;571.5858452757648;224.1838026...")
 
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8426!12180-129A2;3.88132e-05!12181-129A3;1.78127e-05!12176-128I7;1.2568e-05!12177-128I8;1.45275e-05!12182-129A4;4.1302e-05!12183-129A5;2.56409e-05!12184-129A6;3.40939e-05!10809-111A8;6.74356e-06!10597-108E3;0.0973305!10717-109I6;1.38192e-05!10455-106G5;1.44171e-06!10534-107G3;0.918202!10429-106D6;0.262843!10464-106H5;0.447202!10827-111C8;0.258937!10789-110H6;0.283796!10828-111C9;0.282288!10788-110H5;0.18447!10792-110H9;0.921806!10765-110E9;0.111106!10829-111D1;0.885171!10830-111D2;0.765587!10831-111D3;0.274881!10832-111D4;0.538533!10833-111D5;0.690246!10764-110E8;0.568507!10770-110F5;0.92828!10399-106A3;0.919512!10400-106A4;0.537512!10405-106A9;0.662488!10834-111D6;0.632094!10835-111D7;0.892564!10836-111D8;0.0296536!10837-111D9;0.129393!10699-109G6;0.871001!10802-111A1;0.52919!10796-110I4;0.729397!10010-101C1;0.0181751!10810-111A9;0.000836227!10421-106C7;0.00172695!10708-109H6;0.595603!12235-129G3;0.000892189!12236-129G4;0.0213224!12237-129G5;0.114109!10167-103B5;0.00371797!10151-102I7;0.250354!10428-106D5;0.0938931!10795-110I3;0.00199938!10805-111A4;0.163542!10052-101G7;0.000190004!10189-103D9;0.00316582!10589-108D4;1.48281e-05!10425-106D2;0.0112644!10427-106D4;0.0019986!10702-109G9;0.468808!10432-106D9;0.449902!10496-107C1;0.0649427!10718-109I7;0.00659076!10011-101C2;0.854259!10053-101G8;0.006282!10686-109F2;2.64827e-05!10084-102B3;0.498485!10012-101C3;0.152739!10085-102B4;0.112997!10482-107A5;0.615944!10419-106C5;0.00553295!10080-102A8;0.00386807!10760-110E4;0.0873636!10709-109H7;8.70938e-07!10710-109H8;0.00130795!10703-109H1;0.000945515!10719-109I8;0.00362396!10642-109A3;0.004134!10177-103C6;0.000283945!10164-103B2;0.293221!10173-103C2;0.18349!10166-103B4;0.959235!10083-102B2;0.890538!10188-103D8;0.749726!10552-107I3;0.182144!10553-107I4;4.05865e-06!10013-101C4;8.97292e-06!10536-107G5;0.0237487!10618-108G6;2.07802e-05!10423-106C9;0.00508314!10785-110H2;0.0298824!12238-129G6;0.0018866!12239-129G7;0.425602!12240-129G8;0.6231!10416-106C2;0.0556064!10801-110I9;0.836379!10766-110F1;0.583584!10824-111C5;0.769539!10825-111C6;0.00198816!10826-111C7;0.00463842!10454-106G4;0.00673157!10409-106B4;0.00530703!10638-108I8;0.972262!10636-108I6;7.91343e-05!10513-107D9;0.00070101!10420-106C6;0.00570616!10082-102B1;0.0016207!10014-101C5;0.00347872!10070-101I7;0.000115926!10452-106G2;0.00029621!10453-106G3;0.0127558!10449-106F8;0.0766475!10042-101F6;0.080241!10069-101I6;0.073949!10193-103E4;0.0299027!10631-108I1;0.201536!10438-106E6;0.457999!10488-107B2;0.00209749!10196-103E7;3.57471e-05!10071-101I8;0.0463344!10071-101I8;0.00622954!10041-101F5;0.689738!10451-106G1;6.01649e-05!10450-106F9;0.000269775!10604-108F1;0.00113529!10605-108F2;0.000581181!10606-108F3;0.00275048!10603-108E9;0.000611387!10497-107C2;0.000702708!10448-106F7;0.000185763!10643-109A4;4.13679e-05!10426-106D3;0.000543157!10431-106D8;1.83514e-06!10197-103E8;1.16028e-06!10443-106F2;0.0110139!10815-111B5;0.0117092!10816-111B6;0.000153338!10817-111B7;3.28048e-05!10015-101C6;7.44955e-05!10410-106B5;0.0180507!10054-101G9;5.79809e-05!10758-110E2;0.325767!10711-109H9;0.0304938!10040-101F4;0.0198464!10470-106I2;0.202012!10415-106C1;0.000622709!10198-103E9;0.00309957!10614-108G2;0.00406139!10612-108F9;0.00494464!10549-107H9;0.00760396!10615-108G3;0.000326411!10487-107B1;0.010141!10433-106E1;2.84489e-05!10688-109F4;0.000437948!10444-106F3;0.011614!10444-106F3;0.00463091!10485-107A8;0.00701703!10413-106B8;2.02143e-05!10175-103C4;0.00158021!10161-103A8;0.238784!12131-128D7;0.0824709!10624-108H3;0.883183!10712-109I1;0.00935733!10205-103F7;0.943278!10206-103F8;0.0334338!10207-103F9;0.0172446!10050-101G5;0.0485752!10051-101G6;0.286116!10016-101C7;0.0776676!10046-101G1;0.00437175!10778-110G4;0.0410132!10633-108I3;0.602953!10818-111B8;0.00144147!10819-111B9;7.03381e-07!10820-111C1;2.43538e-06!10484-107A7;1.7575e-06!10808-111A7;3.17891e-05!10169-103B7;0.886487!10153-102I9;0.121071!13425-144D5;0.10516!13433-144E4;0.0027981!13437-144E8;0.00116043!11904-125F5;0.00111421!11905-125F6;0.362063!10039-101F3;0.766927!10791-110H8;0.157483!10017-101C8;0.000137651!10045-101F9;0.0261808!10509-107D5;0.155555!10839-111E2;0.00904509!10692-109F8;0.000859195!10079-102A7;4.96642e-08!10078-102A6;0.0143218!10721-110A1;0.0376262!10569-108B2;1.44148e-06!10570-108B3;0.436685!10571-108B4;0.905715!10647-109A8;0.355155!10752-110D5;0.00038703!10782-110G8;0.385924!10726-110A6;0.00884898!10018-101C9;0.123546!10086-102B5;0.277999!10182-103D2;0.120897!10165-103B3;0.292349!10499-107C4;0.128776!10408-106B3;0.000530679!10019-101D1;0.00845853!10068-101I5;0.00180441!10075-102A3;0.0339807!10077-102A5;0.000179337!10727-110A7;8.35408e-07!10775-110G1;0.731047!10412-106B7;0.367693!12231-129F8;0.00106055!12232-129F9;0.788095!12233-129G1;0.257984!12234-129G2;0.641943!10414-106B9;0.741521!10170-103B8;0.000181741!10183-103D3;0.340113!10150-102I6;0.21242!10174-103C3;0.162788!10155-103A2;0.182386!10038-101F2;0.103882!10838-111E1;0.0759823!10759-110E3;1.44941e-05!10514-107E1;0.000751365!10465-106H6;0.00464217!10691-109F7;3.06377e-06!10843-111E6;0.280309!10844-111E7;0.0181153!11747-123G1;0.0231961!11748-123G2;0.388564!11749-123G3;0.234169!11750-123G4;0.599962!11751-123G5;0.0944968!11840-124H4;0.566421!11752-123G6;0.413968!11753-123G7;0.0166955!11754-123G8;0.267507!11755-123G9;0.695527!11756-123H1;0.808127!11833-124G6;0.791906!11760-123H5;0.092548!11836-124G9;0.654561!11758-123H3;0.841235!11835-124G8;0.404456!11762-123H7;0.794197!11838-124H2;0.402374!11757-123H2;0.35544!11759-123H4;0.936675!11761-123H6;0.732749!11842-124H6;0.113487!11837-124H1;0.20254!10568-108B1;0.860835!13230-141I8;0.128143!13231-141I9;0.816714!10696-109G3;0.799588!10493-107B7;0.323048!10494-107B8;4.21967e-05!10850-111F4;1.66052e-08!10851-111F5;4.52112e-05!10852-111F6;0.00610304!10853-111F7;0.0165809!10854-111F8;7.51153e-06!10855-111F9;0.000159682!10856-111G1;0.14555!10847-111F1;0.00996025!10846-111E9;0.00816246!10848-111F2;0.00314819!10845-111E8;0.00509336!10857-111G2;0.0173287!10858-111G3;0.00060717!10156-103A3;0.0140726!11901-125F2;0.127193!11902-125F3;0.903097!11903-125F4;0.847279!10689-109F5;0.943414!10648-109A9;8.8959e-05!10784-110H1;2.89648e-08!10744-110C6;0.00203166!10772-110F7;0.406703!10474-106I6;0.88503!10600-108E6;0.809859!10684-109E9;6.57852e-05!12226-129F3;0.0275264!12227-129F4;7.88684e-07!10508-107D4;0.142765!10539-107G8;0.0285809!10607-108F4;0.00664726!10555-107I6;0.00774869!10774-110F9;0.0242846!10637-108I7;0.00133486!10663-109C6;0.0277008!10728-110A8;0.0247124!10729-110A9;0.00704065!10430-106D7;0.609665!10730-110B1;0.098438!10813-111B3;0.00778178!10812-111B2;0.450051!10037-101F1;0.860068!10172-103C1;0.165019!10163-103B1;0.218815!10076-102A4;0.153843!10073-102A1;0.202869!10036-101E9;0.984497!10195-103E6;0.220588!10277-104E7;0.251815!10434-106E2;0.611014!10550-107I1;6.71121e-06!10545-107H5;2.31414e-07!10544-107H4;0.000787241!10704-109H2;0.00012588!10510-107D6;0.414335!10558-107I9;0.0432028!10020-101D2;0.00591941!10732-110B3;0.030154!10049-101G4;5.30039e-06!10698-109G5;0.769271!10437-106E5;0.0221839!10417-106C3;0.0486882!10035-101E8;0.0564131!10171-103B9;0.245709!10157-103A4;0.348485!10034-101E7;0.181481!10072-101I9;0.253404!10199-103F1;0.8866!10200-103F2;0.0169529!10697-109G4;0.0283348!10723-110A3;0.023951!10179-103C8;0.00249301!10160-103A7;0.541954!10180-103C9;0.564357!10162-103A9;0.861347!10021-101D3;0.615809!10840-111E3;0.00218726!10706-109H4;0.902407!10033-101E6;1.01796e-05!10032-101E5;0.226171!10490-107B4;0.222431!10439-106E7;0.000215936!10022-101D4;0.000577105!10176-103C5;0.0123578!10469-106I1;0.192852!10067-101I4;0.000224325!10411-106B6;0.0923918!10471-106I3;0.0128519!10030-101E3;1.50096e-05!10475-106I7;0.0518314!10787-110H4;0.000906708!10477-106I9;5.87242e-06!10695-109G2;0.0692299!11771-123I7;0.243843!11772-123I8;3.52645e-07!11773-123I9;0.000195854!10093-102C3;9.99432e-06!10442-106F1;0.0045447!10442-106F1;0.0162912!10201-103F3;0.0339433!10639-108I9;0.022792!11843-124H7;2.03041e-05!11841-124H5;5.36192e-12!10693-109F9;0.000410724!10436-106E4;3.74715e-05!10483-107A6;0.00268033!10282-104F3;0.0667766!10023-101D5;0.211587!10066-101I3;0.126747!10065-101I2;0.0910497!10800-110I8;0.0559875!10610-108F7;0.000607254!10841-111E4;0.00236702!10541-107H1;9.67169e-05!10842-111E5;0.011555!10562-108A4;5.50897e-05!10024-101D6;0.0428723!10064-101I1;1.33597e-05!10609-108F6;0.000578735!10048-101G3;0.0446938!10781-110G7;0.0564088!10181-103D1;0.00385253!10159-103A6;0.134404!10056-101H2;0.0565112!10737-110B8;0.32893!10025-101D7;0.431076!10044-101F8;5.39137e-06!10424-106D1;0.000264986!10463-106H4;0.328524!10616-108G4;1.14087e-08!10486-107A9;0.000123985!10062-101H8;0.000267281!10202-103F4;0.0665712!10158-103A5;0.00277819!10441-106E9;0.106496!10031-101E4;0.00114417!10063-101H9;0.162599!10063-101H9;0.713005!11763-123H8;0.00438366!11765-123I1;0.746161!11768-123I4;0.994246!10807-111A6;0.812693!10790-110H7;0.0155638!10798-110I6;0.00410235!10786-110H3;0.000564212!10591-108D6;0.00521466!10593-108D8;0.00434477!10590-108D5;0.0070426!10026-101D8;0.00253669!10096-102C6;0.31883!10168-103B6;0.0102406!10154-103A1;0.270189!10209-103G2;0.0857312!10061-101H7;0.00862767!10027-101D9;0.113441!10043-101F7;0.000633435!10783-110G9;0.00134781!10028-101E1;0.0968389!10060-101H6;0.169474!10203-103F5;0.0835!10059-101H5;0.114713!10047-101G2;0.286768!10029-101E2;1.01767e-05!10058-101H4;0.00125115!10418-106C4;0.123617!10492-107B6;0.000838876!10694-109G1;1.74985e-05!10797-110I5;0.00667226!10057-101H3;0.0426129!10100-102D1;0.102722!10055-101H1;0.00779057!10204-103F6;0.33868!10191-103E2;0.101282!10563-108A5;1.04764e-05
|name=CNhs12851_bu_f0
|name=CNhs12851_bu_f0
|tomtom_result=MOT3#MA0340.1;-3;0.00355423;1.69182;1;6;AAAAAGGCAGAT;TAGGCA;+!ELF5#MA0136.1;-3;0.00366351;1.74383;1;9;AAAAAGGCAGAT;AAGGAAGTA;-!tll#MA0459.1;-1;0.00471219;2.243;1;10;AAAAAGGCAGAT;AAAAGTCAAA;+!SPI1#MA0080.2;-4;0.00701996;3.3415;1;7;AAAAAGGCAGAT;AGGAAGT;+!Klf4#MA0039.1;-1;0.00906454;4.31472;1;10;AAAAAGGCAGAT;TAAAGGAAGG;+!HMG-I/Y#MA0045.1;2;0.0119562;5.69115;1;12;AAAAAGGCAGAT;CAACAAATGGAAAAAC;+!Hand1::Tcfe2a#MA0092.1;-3;0.0123606;5.88365;1;9;AAAAAGGCAGAT;ATGCCAGACC;-!RME1#MA0370.1;1;0.0130025;6.18919;1;9;AAAAAGGCAGAT;TCCAAAGGAA;+!FHL1#MA0295.1;-3;0.0150635;7.17021;1;8;AAAAAGGCAGAT;GACGCAAA;+!btd#MA0443.1;-1;0.0166778;7.93866;1;10;AAAAAGGCAGAT;AGGGGGCGGA;+!id1#MA0120.1;1;0.0175064;8.33303;1;11;AAAAAGGCAGAT;CGAAAAGGAAAA;-!Tal1::Gata1#MA0140.1;3;0.0186409;8.87305;1;12;AAAAAGGCAGAT;CTGGTGGGGACAGATAAG;+!PPARG::RXRA#MA0065.2;-1;0.0187159;8.90878;1;11;AAAAAGGCAGAT;GTAGGGCAAAGGTCA;+!SPI1#MA0080.2;-4;0.0192361;9.15639;1;6;AAAAAGGCAGAT;CGGAAG;+
}}
}}

Latest revision as of 13:51, 7 September 2012

Full Name: CNhs12851_bu_f0

Motif matrix
POACGT
1830.1677070483778790.8267461646977135.9830420956831245.3751376638482
2959.9476234873592246.63536151632658571.5858452757648224.18380269315603
3952.111175080600840.63851442642467914.833935767023394.7690076985575
41130.5794954126013197.86724300202482665.01626093779038.889633620188059
51914.15429717764877.53015374290459572.798986149884737.869195902169197
653.563882989707560.9425940495663721893.512999946523554.33315598680961
710.02620722498503124.2086092077935971960.93979779041257.178018749415662
8415.72728420573141499.359032718390632.60245974923794454.663856299248216
91665.0174068344081164.0433333080893311.171782328883575162.12011050122496
10387.94339696676946223.738549670205031353.76247689570636.90820943992693
111351.8922714779098128.8783375590923187.00877378708515334.57325014851887
12354.190439835163307.28452798718456653.4435506993248687.4341144509356

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
MOT3#MA0340.1-30.003554231.6918216AAAAAGGCAGATTAGGCA+
ELF5#MA0136.1-30.003663511.7438319AAAAAGGCAGATAAGGAAGTA-
tll#MA0459.1-10.004712192.243110AAAAAGGCAGATAAAAGTCAAA+
SPI1#MA0080.2-40.007019963.341517AAAAAGGCAGATAGGAAGT+
Klf4#MA0039.1-10.009064544.31472110AAAAAGGCAGATTAAAGGAAGG+
HMG-I/Y#MA0045.120.01195625.69115112AAAAAGGCAGATCAACAAATGGAAAAAC+
Hand1::Tcfe2a#MA0092.1-30.01236065.8836519AAAAAGGCAGATATGCCAGACC-
RME1#MA0370.110.01300256.1891919AAAAAGGCAGATTCCAAAGGAA+
FHL1#MA0295.1-30.01506357.1702118AAAAAGGCAGATGACGCAAA+
btd#MA0443.1-10.01667787.93866110AAAAAGGCAGATAGGGGGCGGA+
id1#MA0120.110.01750648.33303111AAAAAGGCAGATCGAAAAGGAAAA-
Tal1::Gata1#MA0140.130.01864098.87305112AAAAAGGCAGATCTGGTGGGGACAGATAAG+
PPARG::RXRA#MA0065.2-10.01871598.90878111AAAAAGGCAGATGTAGGGCAAAGGTCA+
SPI1#MA0080.2-40.01923619.1563916AAAAAGGCAGATCGGAAG+
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