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MacroAPE 1083:Motif GCNACT: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;7360;0!02;0;7360;0;0!03;1840;1840;1840;1840!04;7360;0;0;0!05;0;7360;0;0!06;0;0;0;7360 |macroape_1083_sample_pvalues=11376-118A8;0.6572...")
 
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-110H6;0.427828!10828-111C9;0.775397!10788-110H5;0.425875!10792-110H9;0.537539!10765-110E9;0.486241!10829-111D1;0.863085!10830-111D2;0.638949!10831-111D3;0.253484!10832-111D4;0.976419!10833-111D5;0.960658!10764-110E8;0.921508!10770-110F5;0.715809!10399-106A3;0.280019!10400-106A4;0.925258!10405-106A9;0.892529!10834-111D6;0.826098!10835-111D7;0.739615!10836-111D8;0.640402!10837-111D9;0.642033!10699-109G6;0.97441!10802-111A1;0.985791!10796-110I4;0.966765!10010-101C1;0.780747!10810-111A9;0.47172!10421-106C7;0.747287!10708-109H6;0.671649!12235-129G3;0.73753!12236-129G4;0.740613!12237-129G5;0.669246!10167-103B5;0.769136!10151-102I7;0.801798!10428-106D5;0.869928!10795-110I3;0.00720188!10805-111A4;0.894991!10052-101G7;0.108717!10189-103D9;0.679992!10589-108D4;0.309341!10425-106D2;0.10441!10427-106D4;0.857359!10702-109G9;0.880078!10432-106D9;0.82857!10496-107C1;0.625345!10718-109I7;0.703091!10011-101C2;0.794212!10053-101G8;0.52758!10686-109F2;0.229925!10084-102B3;0.0705833!10012-101C3;0.517115!10085-102B4;0.689182!10482-107A5;0.648716!10419-106C5;0.704531!10080-102A8;0.771294!10760-110E4;0.323185!10709-109H7;0.529578!10710-109H8;0.728993!10703-109H1;0.764234!10719-109I8;0.0401062!10642-109A3;0.932068!10177-103C6;0.149324!10164-103B2;0.922662!10173-103C2;0.739293!10166-103B4;0.597557!10083-102B2;0.659797!10188-103D8;0.397382!10552-107I3;0.671526!10553-107I4;0.614636!10013-101C4;0.86587!10536-107G5;0.472277!10618-108G6;0.169158!10423-106C9;0.708998!10785-110H2;0.801636!12238-129G6;0.501528!12239-129G7;0.90969!12240-129G8;0.416584!10416-106C2;0.895745!10801-110I9;0.318952!10766-110F1;0.634681!10824-111C5;0.687863!10825-111C6;0.465878!10826-111C7;0.466668!10454-106G4;0.51995!10409-106B4;0.623438!10638-108I8;0.845116!10636-108I6;0.59988!10513-107D9;0.725052!10420-106C6;0.886977!10082-102B1;0.794175!10014-101C5;0.683556!10070-101I7;0.582605!10452-106G2;0.485089!10453-106G3;0.220747!10449-106F8;0.534193!10042-101F6;0.621237!10069-101I6;0.944218!10193-103E4;0.816962!10631-108I1;0.736916!10438-106E6;0.948917!10488-107B2;0.678158!10196-103E7;0.845072!10071-101I8;0.754373!10071-101I8;0.772087!10041-101F5;0.854893!10451-106G1;0.326773!10450-106F9;0.922301!10604-108F1;0.768238!10605-108F2;0.958136!10606-108F3;0.813723!10603-108E9;0.78424!10497-107C2;0.843994!10448-106F7;0.806338!10643-109A4;0.50873!10426-106D3;0.581716!10431-106D8;0.937285!10197-103E8;0.605068!10443-106F2;0.827385!10815-111B5;0.733077!10816-111B6;0.988721!10817-111B7;0.891085!10015-101C6;0.916763!10410-106B5;0.902775!10054-101G9;0.764476!10758-110E2;0.8183!10711-109H9;0.707855!10040-101F4;0.702376!10470-106I2;0.723711!10415-106C1;0.813267!10198-103E9;0.757515!10614-108G2;0.69003!10612-108F9;0.667786!10549-107H9;0.941902!10615-108G3;0.831685!10487-107B1;0.48004!10433-106E1;0.819222!10688-109F4;0.742481!10444-106F3;0.62606!10444-106F3;0.801831!10485-107A8;0.872463!10413-106B8;0.623357!10175-103C4;0.556182!10161-103A8;0.898802!12131-128D7;0.949772!10624-108H3;0.752263!10712-109I1;0.142873!10205-103F7;0.88517!10206-103F8;0.63157!10207-103F9;0.877624!10050-101G5;0.410733!10051-101G6;0.758199!10016-101C7;0.841961!10046-101G1;0.94018!10778-110G4;0.672255!10633-108I3;0.20442!10818-111B8;0.990149!10819-111B9;0.949811!10820-111C1;0.924206!10484-107A7;0.997823!10808-111A7;0.735301!10169-103B7;0.906905!10153-102I9;0.803856!13425-144D5;0.93051!13433-144E4;0.111792!13437-144E8;0.0390708!11904-125F5;0.0501414!11905-125F6;0.379355!10039-101F3;0.766894!10791-110H8;0.731156!10017-101C8;0.438417!10045-101F9;0.847257!10509-107D5;0.489171!10839-111E2;0.583394!10692-109F8;0.203312!10079-102A7;0.869644!10078-102A6;0.958857!10721-110A1;0.917582!10569-108B2;0.480183!10570-108B3;0.462491!10571-108B4;0.217498!10647-109A8;0.930169!10752-110D5;0.933154!10782-110G8;0.891136!10726-110A6;0.168803!10018-101C9;0.950026!10086-102B5;0.290824!10182-103D2;0.406956!10165-103B3;0.881464!10499-107C4;0.876008!10408-106B3;0.976405!10019-101D1;0.606684!10068-101I5;0.22342!10075-102A3;0.101241!10077-102A5;0.20785!10727-110A7;0.189433!10775-110G1;0.792991!10412-106B7;0.868315!12231-129F8;0.548227!12232-129F9;0.583691!12233-129G1;0.402312!12234-129G2;0.388451!10414-106B9;0.386582!10170-103B8;0.84653!10183-103D3;0.738888!10150-102I6;0.69495!10174-103C3;0.7652!10155-103A2;0.888389!10038-101F2;0.9524!10838-111E1;0.923184!10759-110E3;0.405091!10514-107E1;0.738524!10465-106H6;0.514661!10691-109F7;0.746145!10843-111E6;0.861465!10844-111E7;0.178783!11747-123G1;0.312989!11748-123G2;0.735329!11749-123G3;0.783272!11750-123G4;0.424474!11751-123G5;0.53303!11840-124H4;0.762951!11752-123G6;0.573472!11753-123G7;0.858625!11754-123G8;0.598557!11755-123G9;0.903689!11756-123H1;0.81128!11833-124G6;0.512689!11760-123H5;0.366204!11836-124G9;0.706356!11758-123H3;0.12115!11835-124G8;0.785166!11762-123H7;0.624564!11838-124H2;0.376779!11757-123H2;0.748147!11759-123H4;0.218629!11761-123H6;0.39074!11842-124H6;0.390024!11837-124H1;0.401632!10568-108B1;0.366046!13230-141I8;0.994012!13231-141I9;0.795094!10696-109G3;0.72868!10493-107B7;0.0389499!10494-107B8;0.811075!10850-111F4;0.926947!10851-111F5;0.742555!10852-111F6;0.834099!10853-111F7;0.946078!10854-111F8;0.845038!10855-111F9;0.77143!10856-111G1;0.115472!10847-111F1;0.580626!10846-111E9;0.985144!10848-111F2;0.787169!10845-111E8;0.80566!10857-111G2;0.956289!10858-111G3;0.792781!10156-103A3;0.649377!11901-125F2;0.784561!11902-125F3;0.213004!11903-125F4;0.375343!10689-109F5;0.346992!10648-109A9;0.827743!10784-110H1;0.795438!10744-110C6;0.51879!10772-110F7;0.965952!10474-106I6;0.918092!10600-108E6;0.860489!10684-109E9;0.334061!12226-129F3;0.182494!12227-129F4;0.292938!10508-107D4;0.73599!10539-107G8;0.321031!10607-108F4;0.96977!10555-107I6;0.84072!10774-110F9;0.474308!10637-108I7;0.59389!10663-109C6;0.907173!10728-110A8;0.41532!10729-110A9;0.694743!10430-106D7;0.594846!10730-110B1;0.575932!10813-111B3;0.0026274!10812-111B2;0.68523!10037-101F1;0.714593!10172-103C1;0.778539!10163-103B1;0.62016!10076-102A4;0.78677!10073-102A1;0.600684!10036-101E9;0.818828!10195-103E6;0.570326!10277-104E7;0.708827!10434-106E2;0.942285!10550-107I1;0.921388!10545-107H5;0.949284!10544-107H4;0.684402!10704-109H2;0.647528!10510-107D6;0.703224!10558-107I9;0.535897!10020-101D2;0.0810329!10732-110B3;0.61439!10049-101G4;0.649825!10698-109G5;0.346739!10437-106E5;0.649707!10417-106C3;0.734208!10035-101E8;0.660059!10171-103B9;0.670717!10157-103A4;0.689437!10034-101E7;0.753069!10072-101I9;0.653957!10199-103F1;0.973862!10200-103F2;0.454862!10697-109G4;0.790176!10723-110A3;0.550138!10179-103C8;0.822158!10160-103A7;0.645998!10180-103C9;0.575621!10162-103A9;0.949017!10021-101D3;0.842047!10840-111E3;0.418533!10706-109H4;0.839509!10033-101E6;0.395438!10032-101E5;0.704444!10490-107B4;0.585095!10439-106E7;0.663582!10022-101D4;0.668815!10176-103C5;0.666596!10469-106I1;0.653165!10067-101I4;0.815285!10411-106B6;0.636454!10471-106I3;0.998914!10030-101E3;0.930973!10475-106I7;0.854843!10787-110H4;0.114976!10477-106I9;0.450247!10695-109G2;0.347001!11771-123I7;0.479111!11772-123I8;0.833028!11773-123I9;0.950516!10093-102C3;0.743341!10442-106F1;0.699231!10442-106F1;0.526912!10201-103F3;0.407421!10639-108I9;0.635806!11843-124H7;0.70356!11841-124H5;0.819953!10693-109F9;0.712538!10436-106E4;0.992438!10483-107A6;0.839432!10282-104F3;0.691623!10023-101D5;0.744451!10066-101I3;0.866975!10065-101I2;0.589692!10800-110I8;0.769521!10610-108F7;0.253788!10841-111E4;0.0989185!10541-107H1;0.697935!10842-111E5;0.976856!10562-108A4;0.0655253!10024-101D6;0.303528!10064-101I1;0.726512!10609-108F6;0.81513!10048-101G3;0.170966!10781-110G7;0.52536!10181-103D1;0.198278!10159-103A6;0.966026!10056-101H2;0.741703!10737-110B8;0.999301!10025-101D7;0.522168!10044-101F8;0.083143!10424-106D1;0.20084!10463-106H4;0.749896!10616-108G4;0.787511!10486-107A9;0.684134!10062-101H8;0.88986!10202-103F4;0.699563!10158-103A5;0.913228!10441-106E9;0.988863!10031-101E4;0.680212!10063-101H9;0.613897!10063-101H9;0.849235!11763-123H8;0.743091!11765-123I1;0.76114!11768-123I4;0.926538!10807-111A6;0.914325!10790-110H7;0.581728!10798-110I6;0.439833!10786-110H3;0.734829!10591-108D6;0.21963!10593-108D8;0.341279!10590-108D5;0.426889!10026-101D8;0.192115!10096-102C6;0.929058!10168-103B6;0.557453!10154-103A1;0.883783!10209-103G2;0.966716!10061-101H7;0.890014!10027-101D9;0.545971!10043-101F7;0.149703!10783-110G9;0.095377!10028-101E1;0.921497!10060-101H6;0.935646!10203-103F5;0.808634!10059-101H5;0.883799!10047-101G2;0.894602!10029-101E2;0.762966!10058-101H4;0.651592!10418-106C4;0.617411!10492-107B6;0.708821!10694-109G1;0.861801!10797-110I5;0.225805!10057-101H3;0.680654!10100-102D1;0.900013!10055-101H1;0.336373!10204-103F6;0.516393!10191-103E2;0.178291!10563-108A5;0.690936
|name=motif_GCNACT
|name=motif_GCNACT
|tomtom_result=odd#MA0454.1;2;0.00241406;1.14909;1;6;GCAACT;CTGCTACTGTT;-!Nkx3-2#MA0122.1;0;0.00945459;4.50039;1;6;GCAACT;TCCACTTAA;-!GABPA#MA0062.2;0;0.0107047;5.09544;1;6;GCAACT;GCCACTTCCGG;-!ceh-22#MA0264.1;0;0.0107047;5.09544;1;6;GCAACT;ACCACTTGAAA;+!RPN4#MA0373.1;1;0.012052;5.73676;1;6;GCAACT;CGCCACC;-
}}
}}

Latest revision as of 13:53, 7 September 2012

Full Name: motif_GCNACT

Motif matrix
POACGT
010073600
020736000
031840184018401840
047360000
050736000
060007360

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
odd#MA0454.120.002414061.1490916GCAACTCTGCTACTGTT-
Nkx3-2#MA0122.100.009454594.5003916GCAACTTCCACTTAA-
GABPA#MA0062.200.01070475.0954416GCAACTGCCACTTCCGG-
ceh-22#MA0264.100.01070475.0954416GCAACTACCACTTGAAA+
RPN4#MA0373.110.0120525.7367616GCAACTCGCCACC-
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