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MacroAPE 1083:AHR si: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;40.51343240527031;18.259112547756697;56.41253757072521;38.77363485291994!2;10.877470982533044;11.870876719950774;34.66312982331297;96.547239...")
 
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162879!10429-106D6;0.0634217!10464-106H5;0.181292!10827-111C8;0.188111!10789-110H6;0.085777!10828-111C9;0.2185!10788-110H5;0.051694!10792-110H9;0.0252099!10765-110E9;0.145804!10829-111D1;0.17963!10830-111D2;0.0828152!10831-111D3;0.186158!10832-111D4;0.079044!10833-111D5;0.116021!10764-110E8;0.127286!10770-110F5;0.172019!10399-106A3;0.0661526!10400-106A4;0.123796!10405-106A9;0.146356!10834-111D6;0.0817688!10835-111D7;0.146558!10836-111D8;0.0197361!10837-111D9;0.114728!10699-109G6;0.174127!10802-111A1;0.149622!10796-110I4;0.191737!10010-101C1;0.0819448!10810-111A9;0.204197!10421-106C7;0.0695469!10708-109H6;0.146137!12235-129G3;0.223753!12236-129G4;0.299745!12237-129G5;0.0159174!10167-103B5;0.532197!10151-102I7;0.590677!10428-106D5;0.970189!10795-110I3;0.301894!10805-111A4;0.174146!10052-101G7;0.277332!10189-103D9;0.227375!10589-108D4;0.268392!10425-106D2;0.0318173!10427-106D4;0.234508!10702-109G9;0.00980624!10432-106D9;0.0332184!10496-107C1;0.0817709!10718-109I7;0.131951!10011-101C2;0.204573!10053-101G8;0.396879!10686-109F2;0.552293!10084-102B3;0.292162!10012-101C3;0.735543!10085-102B4;0.747027!10482-107A5;0.697299!10419-106C5;0.0522594!10080-102A8;0.030296!10760-110E4;0.396551!10709-109H7;0.395902!10710-109H8;0.0195889!10703-109H1;0.50528!10719-109I8;0.143976!10642-109A3;0.0118466!10177-103C6;0.133081!10164-103B2;0.817882!10173-103C2;0.940571!10166-103B4;0.36065!10083-102B2;0.559351!10188-103D8;0.805363!10552-107I3;0.573195!10553-107I4;0.113157!10013-101C4;0.768817!10536-107G5;0.235785!10618-108G6;0.318366!10423-106C9;0.331677!10785-110H2;0.623119!12238-129G6;0.769112!12239-129G7;0.12535!12240-129G8;0.0319108!10416-106C2;0.20642!10801-110I9;0.505294!10766-110F1;0.0924214!10824-111C5;0.191716!10825-111C6;0.0447827!10826-111C7;0.0507683!10454-106G4;0.031006!10409-106B4;0.059175!10638-108I8;0.03094!10636-108I6;0.0239733!10513-107D9;0.0265766!10420-106C6;0.192284!10082-102B1;0.0585914!10014-101C5;0.225905!10070-101I7;0.270588!10452-106G2;0.240681!10453-106G3;0.0799487!10449-106F8;0.181182!10042-101F6;0.175311!10069-101I6;0.616114!10193-103E4;0.304246!10631-108I1;0.790185!10438-106E6;0.141362!10488-107B2;0.0819171!10196-103E7;0.191836!10071-101I8;0.251826!10071-101I8;0.226333!10041-101F5;0.561633!10451-106G1;0.189336!10450-106F9;0.135215!10604-108F1;0.0753687!10605-108F2;0.134022!10606-108F3;0.0497735!10603-108E9;0.0874114!10497-107C2;0.146687!10448-106F7;0.140411!10643-109A4;0.357988!10426-106D3;0.190652!10431-106D8;0.289312!10197-103E8;0.132621!10443-106F2;0.171073!10815-111B5;0.921042!10816-111B6;0.153312!10817-111B7;0.0709941!10015-101C6;0.146068!10410-106B5;0.202953!10054-101G9;0.110127!10758-110E2;0.340652!10711-109H9;0.23271!10040-101F4;0.247889!10470-106I2;0.994117!10415-106C1;0.541441!10198-103E9;0.0440503!10614-108G2;0.167362!10612-108F9;0.899601!10549-107H9;0.0215349!10615-108G3;0.204288!10487-107B1;0.0245387!10433-106E1;0.05347!10688-109F4;0.295877!10444-106F3;0.519767!10444-106F3;0.828584!10485-107A8;0.650285!10413-106B8;0.0370861!10175-103C4;0.0857341!10161-103A8;0.806747!12131-128D7;0.857336!10624-108H3;0.322513!10712-109I1;0.986989!10205-103F7;0.206657!10206-103F8;0.177183!10207-103F9;0.25421!10050-101G5;0.496642!10051-101G6;0.149882!10016-101C7;0.163713!10046-101G1;0.158976!10778-110G4;0.251529!10633-108I3;0.103749!10818-111B8;0.0461536!10819-111B9;0.0702209!10820-111C1;0.0780002!10484-107A7;0.0508072!10808-111A7;0.0110232!10169-103B7;0.0245765!10153-102I9;0.934406!13425-144D5;0.944922!13433-144E4;0.917599!13437-144E8;0.75684!11904-125F5;0.759607!11905-125F6;0.191469!10039-101F3;0.398545!10791-110H8;0.954342!10017-101C8;0.439621!10045-101F9;0.484225!10509-107D5;0.544952!10839-111E2;0.0118092!10692-109F8;0.173788!10079-102A7;0.425653!10078-102A6;0.186646!10721-110A1;0.139769!10569-108B2;0.106731!10570-108B3;0.0633829!10571-108B4;0.0776139!10647-109A8;0.087688!10752-110D5;0.51176!10782-110G8;0.0280096!10726-110A6;0.33587!10018-101C9;0.163531!10086-102B5;0.814254!10182-103D2;0.513319!10165-103B3;0.655545!10499-107C4;0.737956!10408-106B3;0.127724!10019-101D1;0.200824!10068-101I5;0.442198!10075-102A3;0.645806!10077-102A5;0.321809!10727-110A7;0.427328!10775-110G1;0.201941!10412-106B7;0.312464!12231-129F8;0.435581!12232-129F9;0.417346!12233-129G1;0.184071!12234-129G2;0.0951386!10414-106B9;0.284782!10170-103B8;0.0134574!10183-103D3;0.933971!10150-102I6;0.93357!10174-103C3;0.956574!10155-103A2;0.385676!10038-101F2;0.559062!10838-111E1;0.48764!10759-110E3;0.0773802!10514-107E1;0.0644387!10465-106H6;0.198567!10691-109F7;0.126482!10843-111E6;0.724168!10844-111E7;0.0558817!11747-123G1;0.201088!11748-123G2;0.0862544!11749-123G3;0.147607!11750-123G4;0.368042!11751-123G5;0.85135!11840-124H4;0.551316!11752-123G6;0.343853!11753-123G7;0.407634!11754-123G8;0.79828!11755-123G9;0.172264!11756-123H1;0.353949!11833-124G6;0.287183!11760-123H5;0.450559!11836-124G9;0.138308!11758-123H3;0.130403!11835-124G8;0.0204182!11762-123H7;0.189842!11838-124H2;0.0710842!11757-123H2;0.07436!11759-123H4;0.434411!11761-123H6;0.421155!11842-124H6;0.23268!11837-124H1;0.47902!10568-108B1;0.202412!13230-141I8;0.05761!13231-141I9;0.078566!10696-109G3;0.0544789!10493-107B7;0.755296!10494-107B8;0.167701!10850-111F4;0.69767!10851-111F5;0.77601!10852-111F6;0.699199!10853-111F7;0.121969!10854-111F8;0.893405!10855-111F9;0.738087!10856-111G1;0.0161938!10847-111F1;0.520026!10846-111E9;0.819084!10848-111F2;0.912292!10845-111E8;0.993202!10857-111G2;0.124091!10858-111G3;0.417011!10156-103A3;0.399754!11901-125F2;0.939999!11902-125F3;0.134369!11903-125F4;0.310579!10689-109F5;0.337475!10648-109A9;0.209635!10784-110H1;0.654996!10744-110C6;0.0845683!10772-110F7;0.284337!10474-106I6;0.0516814!10600-108E6;0.060621!10684-109E9;0.286502!12226-129F3;0.268997!12227-129F4;0.527421!10508-107D4;0.171785!10539-107G8;0.197078!10607-108F4;0.0719645!10555-107I6;0.0610578!10774-110F9;0.173085!10637-108I7;0.0112581!10663-109C6;0.0202817!10728-110A8;0.0681696!10729-110A9;0.017511!10430-106D7;0.101928!10730-110B1;0.0960304!10813-111B3;0.117492!10812-111B2;0.156611!10037-101F1;0.108298!10172-103C1;0.943857!10163-103B1;0.974689!10076-102A4;0.93862!10073-102A1;0.862338!10036-101E9;0.471989!10195-103E6;0.685199!10277-104E7;0.851576!10434-106E2;0.775628!10550-107I1;0.298291!10545-107H5;0.0223909!10544-107H4;0.766468!10704-109H2;0.358387!10510-107D6;0.401587!10558-107I9;0.229673!10020-101D2;0.0388109!10732-110B3;0.695455!10049-101G4;0.807211!10698-109G5;0.335267!10437-106E5;0.282123!10417-106C3;0.176453!10035-101E8;0.131758!10171-103B9;0.887572!10157-103A4;0.985023!10034-101E7;0.956757!10072-101I9;0.835923!10199-103F1;0.438606!10200-103F2;0.396144!10697-109G4;0.2044!10723-110A3;0.0238425!10179-103C8;0.962259!10160-103A7;0.754078!10180-103C9;0.873445!10162-103A9;0.658002!10021-101D3;0.243372!10840-111E3;0.258906!10706-109H4;0.0721359!10033-101E6;0.353148!10032-101E5;0.700981!10490-107B4;0.708334!10439-106E7;0.302526!10022-101D4;0.00100348!10176-103C5;0.381472!10469-106I1;0.865737!10067-101I4;0.0754486!10411-106B6;0.269971!10471-106I3;0.113774!10030-101E3;0.000911635!10475-106I7;0.602185!10787-110H4;0.228723!10477-106I9;0.0419939!10695-109G2;0.0011775!11771-123I7;0.380887!11772-123I8;0.805136!11773-123I9;0.407614!10093-102C3;0.583807!10442-106F1;0.631643!10442-106F1;0.0130139!10201-103F3;0.00175156!10639-108I9;0.134934!11843-124H7;0.80939!11841-124H5;0.35634!10693-109F9;0.758313!10436-106E4;0.16768!10483-107A6;0.0714671!10282-104F3;0.058997!10023-101D5;0.740455!10066-101I3;0.621485!10065-101I2;0.285724!10800-110I8;0.175732!10610-108F7;0.123564!10841-111E4;0.12192!10541-107H1;0.11025!10842-111E5;0.0390966!10562-108A4;0.0864891!10024-101D6;0.0385553!10064-101I1;0.13897!10609-108F6;0.125383!10048-101G3;0.0183315!10781-110G7;0.407913!10181-103D1;0.05081!10159-103A6;0.55933!10056-101H2;0.979086!10737-110B8;0.240808!10025-101D7;0.0889602!10044-101F8;0.628976!10424-106D1;0.446683!10463-106H4;0.0512322!10616-108G4;0.064929!10486-107A9;0.130374!10062-101H8;0.0242681!10202-103F4;0.041962!10158-103A5;0.306155!10441-106E9;0.832078!10031-101E4;0.0473416!10063-101H9;0.710189!10063-101H9;0.54692!11763-123H8;0.282083!11765-123I1;0.0190493!11768-123I4;0.0491253!10807-111A6;0.0206168!10790-110H7;0.813159!10798-110I6;0.184853!10786-110H3;0.587833!10591-108D6;0.578443!10593-108D8;0.49934!10590-108D5;0.108979!10026-101D8;0.197473!10096-102C6;0.92509!10168-103B6;0.197681!10154-103A1;0.763905!10209-103G2;0.96919!10061-101H7;0.184564!10027-101D9;0.241017!10043-101F7;0.89817!10783-110G9;0.511917!10028-101E1;0.738348!10060-101H6;0.456968!10203-103F5;0.216301!10059-101H5;0.203805!10047-101G2;0.175843!10029-101E2;0.225335!10058-101H4;0.324602!10418-106C4;0.180417!10492-107B6;0.0631567!10694-109G1;0.0182147!10797-110I5;0.586119!10057-101H3;0.377276!10100-102D1;0.153435!10055-101H1;0.390096!10204-103F6;0.163886!10191-103E2;0.301241!10563-108A5;0.157779
|name=AHR_si
|name=AHR_si
|tomtom_result=Arnt::Ahr#MA0006.1;-2;1.61989e-06;0.000771066;0.00153849;6;GTTGCGTGC;TGCGTG;+!FHL1#MA0295.1;0;0.0019061;0.907303;0.551942;8;GTTGCGTGC;TTTGCGTC;-!HIF1A::ARNT#MA0259.1;-1;0.00280141;1.33347;0.551942;8;GTTGCGTGC;GGACGTGC;+!CBF1#MA0281.1;-1;0.00328588;1.56408;0.551942;8;GTTGCGTGC;TCACGTGC;-!h#MA0449.1;0;0.00348687;1.65975;0.551942;9;GTTGCGTGC;GGCACGTGCC;+!hkb#MA0450.1;0;0.00417364;1.98665;0.566273;9;GTTGCGTGC;GGGGCGTGA;+!MBP1#MA0329.1;0;0.00550452;2.62015;0.581799;7;GTTGCGTGC;TACGCGT;-!Egr1#MA0162.1;-2;0.00595006;2.83223;0.581799;7;GTTGCGTGC;TGCGTGGGCGT;+!z#MA0255.1;-1;0.00612582;2.91589;0.581799;8;GTTGCGTGC;TTGAGTGATT;+!TYE7#MA0409.1;-1;0.00934535;4.44839;0.775383;7;GTTGCGTGC;TCACGTG;-!RSC3#MA0374.1;-1;0.0097969;4.66333;0.775383;7;GTTGCGTGC;CCGCGCG;-!AFT1#MA0269.1;3;0.0126;5.99761;0.920527;9;GTTGCGTGC;CCAATCGGGTGCAATATGTAA;-!RTG3#MA0376.1;5;0.0150558;7.16657;0.976961;9;GTTGCGTGC;GACTAAGCACGTGCTAATAT;-!Pax6#MA0069.1;4;0.0183843;8.75092;0.976961;9;GTTGCGTGC;AACTCATGCGTGAA;-!Mycn#MA0104.2;0;0.0184961;8.80412;0.976961;9;GTTGCGTGC;GCCACGTGCG;-!Myc#MA0147.1;0;0.0193078;9.19053;0.976961;9;GTTGCGTGC;GCCACGTGCG;-
}}
}}

Latest revision as of 13:54, 7 September 2012

Full Name: AHR_si

Motif matrix
POACGT
140.5134324052703118.25911254775669756.4125375707252138.77363485291994
210.87747098253304411.87087671995077434.6631298233129796.54723985087516
321.716570781841643.88307983759854420.70674656163871767.6523201955933
42.54651325094666351.3171620263517245145.86370513226284.231336967110781
50.0150.358474504643821.49278362986528752.1074592421627525
63.4410397512997480.7902972158110341149.376137202533870.3512432070271259
70.03.4410397512997480.7024864140542533149.81519121131782
80.00.0153.958717376671870.0
943.0792233329174566.8755822686521116.15986254698658427.844049228115868

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Arnt::Ahr#MA0006.1-21.61989e-060.0007710660.001538496GTTGCGTGCTGCGTG+
FHL1#MA0295.100.00190610.9073030.5519428GTTGCGTGCTTTGCGTC-
HIF1A::ARNT#MA0259.1-10.002801411.333470.5519428GTTGCGTGCGGACGTGC+
CBF1#MA0281.1-10.003285881.564080.5519428GTTGCGTGCTCACGTGC-
h#MA0449.100.003486871.659750.5519429GTTGCGTGCGGCACGTGCC+
hkb#MA0450.100.004173641.986650.5662739GTTGCGTGCGGGGCGTGA+
MBP1#MA0329.100.005504522.620150.5817997GTTGCGTGCTACGCGT-
Egr1#MA0162.1-20.005950062.832230.5817997GTTGCGTGCTGCGTGGGCGT+
z#MA0255.1-10.006125822.915890.5817998GTTGCGTGCTTGAGTGATT+
TYE7#MA0409.1-10.009345354.448390.7753837GTTGCGTGCTCACGTG-
RSC3#MA0374.1-10.00979694.663330.7753837GTTGCGTGCCCGCGCG-
AFT1#MA0269.130.01265.997610.9205279GTTGCGTGCCCAATCGGGTGCAATATGTAA-
RTG3#MA0376.150.01505587.166570.9769619GTTGCGTGCGACTAAGCACGTGCTAATAT-
Pax6#MA0069.140.01838438.750920.9769619GTTGCGTGCAACTCATGCGTGAA-
Mycn#MA0104.200.01849618.804120.9769619GTTGCGTGCGCCACGTGCG-
Myc#MA0147.100.01930789.190530.9769619GTTGCGTGCGCCACGTGCG-
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