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MacroAPE 1083:CNhs11047 bu f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;410.1508537468826;364.7263939870064;736.6009745928463;3621.408094716845!2;386.28984525157506;642.1174796687494;3511.0539348436123;593.425057...")
 
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9287!12183-129A5;0.0483881!12184-129A6;0.044091!10809-111A8;0.054824!10597-108E3;0.110806!10717-109I6;0.828124!10455-106G5;0.00620675!10534-107G3;0.384137!10429-106D6;0.697177!10464-106H5;0.729315!10827-111C8;0.570266!10789-110H6;0.517483!10828-111C9;0.338701!10788-110H5;0.252065!10792-110H9;0.150386!10765-110E9;0.557307!10829-111D1;0.659598!10830-111D2;0.827448!10831-111D3;0.512288!10832-111D4;0.378633!10833-111D5;0.495094!10764-110E8;0.793674!10770-110F5;0.856476!10399-106A3;0.835941!10400-106A4;0.424054!10405-106A9;0.459707!10834-111D6;0.405098!10835-111D7;0.765749!10836-111D8;0.510902!10837-111D9;0.276765!10699-109G6;0.370939!10802-111A1;0.874261!10796-110I4;0.606347!10010-101C1;0.0354482!10810-111A9;0.176342!10421-106C7;0.283047!10708-109H6;0.457094!12235-129G3;0.113279!12236-129G4;0.93487!12237-129G5;0.342835!10167-103B5;0.68095!10151-102I7;0.120484!10428-106D5;0.140475!10795-110I3;0.535368!10805-111A4;0.753743!10052-101G7;0.471673!10189-103D9;0.574652!10589-108D4;0.383464!10425-106D2;0.357711!10427-106D4;0.848453!10702-109G9;0.890949!10432-106D9;0.896894!10496-107C1;0.0239463!10718-109I7;0.174859!10011-101C2;0.64729!10053-101G8;0.527494!10686-109F2;0.0608515!10084-102B3;0.189808!10012-101C3;0.191266!10085-102B4;0.139144!10482-107A5;0.176425!10419-106C5;0.175127!10080-102A8;0.202215!10760-110E4;0.444084!10709-109H7;0.0482952!10710-109H8;0.0625651!10703-109H1;0.151579!10719-109I8;0.118283!10642-109A3;0.723976!10177-103C6;0.97171!10164-103B2;0.125647!10173-103C2;0.127362!10166-103B4;0.125806!10083-102B2;0.135745!10188-103D8;0.214007!10552-107I3;0.203501!10553-107I4;0.157812!10013-101C4;0.0729374!10536-107G5;0.494812!10618-108G6;0.974279!10423-106C9;0.199548!10785-110H2;0.123142!12238-129G6;0.0701139!12239-129G7;0.589564!12240-129G8;0.73361!10416-106C2;0.794122!10801-110I9;0.570313!10766-110F1;0.493319!10824-111C5;0.123216!10825-111C6;0.189641!10826-111C7;0.120183!10454-106G4;0.173897!10409-106B4;0.323431!10638-108I8;0.29032!10636-108I6;0.0782652!10513-107D9;0.0720591!10420-106C6;0.097645!10082-102B1;0.790465!10014-101C5;0.831356!10070-101I7;0.68845!10452-106G2;0.584836!10453-106G3;0.697424!10449-106F8;0.962095!10042-101F6;0.962748!10069-101I6;0.215353!10193-103E4;0.441235!10631-108I1;0.160116!10438-106E6;0.866669!10488-107B2;0.103104!10196-103E7;0.129632!10071-101I8;0.454846!10071-101I8;0.389339!10041-101F5;0.168287!10451-106G1;0.212866!10450-106F9;0.572651!10604-108F1;0.546856!10605-108F2;0.043665!10606-108F3;0.0420839!10603-108E9;0.0571145!10497-107C2;0.0238987!10448-106F7;0.214113!10643-109A4;0.259986!10426-106D3;0.0608203!10431-106D8;0.0209314!10197-103E8;0.0375305!10443-106F2;0.498428!10815-111B5;0.00287132!10816-111B6;0.110389!10817-111B7;0.11016!10015-101C6;0.0945749!10410-106B5;0.980987!10054-101G9;0.9857!10758-110E2;0.455175!10711-109H9;0.206826!10040-101F4;0.231384!10470-106I2;0.140879!10415-106C1;0.015217!10198-103E9;0.0837985!10614-108G2;0.631055!10612-108F9;0.0216153!10549-107H9;0.0920581!10615-108G3;0.162487!10487-107B1;0.897209!10433-106E1;0.147069!10688-109F4;0.0162989!10444-106F3;0.035009!10444-106F3;0.573414!10485-107A8;0.564663!10413-106B8;0.355176!10175-103C4;0.972982!10161-103A8;0.133725!12131-128D7;0.156152!10624-108H3;0.0414238!10712-109I1;0.589016!10205-103F7;0.84075!10206-103F8;0.335518!10207-103F9;0.460421!10050-101G5;0.513603!10051-101G6;0.291934!10016-101C7;0.654018!10046-101G1;0.571105!10778-110G4;0.585505!10633-108I3;0.300862!10818-111B8;0.762862!10819-111B9;0.581516!10820-111C1;0.5385!10484-107A7;0.585504!10808-111A7;0.104069!10169-103B7;0.712725!10153-102I9;0.108041!13425-144D5;0.13922!13433-144E4;0.594084!13437-144E8;0.724633!11904-125F5;0.407437!11905-125F6;0.187191!10039-101F3;0.43482!10791-110H8;0.147874!10017-101C8;0.252981!10045-101F9;0.576352!10509-107D5;0.400284!10839-111E2;0.126811!10692-109F8;0.107938!10079-102A7;0.0642381!10078-102A6;0.560077!10721-110A1;0.87986!10569-108B2;0.422764!10570-108B3;0.880026!10571-108B4;0.959957!10647-109A8;0.836145!10752-110D5;0.2494!10782-110G8;0.297555!10726-110A6;0.479149!10018-101C9;0.0180366!10086-102B5;0.308556!10182-103D2;0.590804!10165-103B3;0.140839!10499-107C4;0.170009!10408-106B3;0.0570929!10019-101D1;0.0227807!10068-101I5;0.55454!10075-102A3;0.352705!10077-102A5;0.49754!10727-110A7;0.0466154!10775-110G1;0.953496!10412-106B7;0.995657!12231-129F8;0.544965!12232-129F9;0.0755899!12233-129G1;0.0728292!12234-129G2;0.0343137!10414-106B9;0.019686!10170-103B8;0.592171!10183-103D3;0.0957238!10150-102I6;0.11037!10174-103C3;0.129673!10155-103A2;0.198104!10038-101F2;0.175792!10838-111E1;0.208713!10759-110E3;0.904402!10514-107E1;0.239716!10465-106H6;0.810177!10691-109F7;0.923847!10843-111E6;0.00160183!10844-111E7;0.434603!11747-123G1;0.552315!11748-123G2;0.48844!11749-123G3;0.44958!11750-123G4;0.507754!11751-123G5;0.449149!11840-124H4;0.951838!11752-123G6;0.792115!11753-123G7;0.592666!11754-123G8;0.959688!11755-123G9;0.397654!11756-123H1;0.0614184!11833-124G6;0.2556!11760-123H5;0.667708!11836-124G9;0.223876!11758-123H3;0.922489!11835-124G8;0.486451!11762-123H7;0.575416!11838-124H2;0.423313!11757-123H2;0.692686!11759-123H4;0.320086!11761-123H6;0.364405!11842-124H6;0.399363!11837-124H1;0.675114!10568-108B1;0.608119!13230-141I8;0.0118814!13231-141I9;0.973195!10696-109G3;0.987767!10493-107B7;0.629754!10494-107B8;0.17814!10850-111F4;0.284961!10851-111F5;0.0491907!10852-111F6;0.134891!10853-111F7;0.0315996!10854-111F8;0.00675439!10855-111F9;0.0370598!10856-111G1;0.112931!10847-111F1;0.596963!10846-111E9;0.00868607!10848-111F2;0.0240873!10845-111E8;0.00691489!10857-111G2;0.00658678!10858-111G3;0.055912!10156-103A3;0.0406616!11901-125F2;0.138674!11902-125F3;0.871987!11903-125F4;0.606968!10689-109F5;0.802594!10648-109A9;0.271352!10784-110H1;0.472118!10744-110C6;0.0614257!10772-110F7;0.401221!10474-106I6;0.585952!10600-108E6;0.666675!10684-109E9;0.379739!12226-129F3;0.770966!12227-129F4;0.0128011!10508-107D4;0.17477!10539-107G8;0.275895!10607-108F4;0.70379!10555-107I6;0.715916!10774-110F9;0.488423!10637-108I7;0.897451!10663-109C6;0.47834!10728-110A8;0.305068!10729-110A9;0.500465!10430-106D7;0.706829!10730-110B1;0.343102!10813-111B3;0.870046!10812-111B2;0.756214!10037-101F1;0.223632!10172-103C1;0.132916!10163-103B1;0.128232!10076-102A4;0.138025!10073-102A1;0.213077!10036-101E9;0.174978!10195-103E6;0.165665!10277-104E7;0.15991!10434-106E2;0.177743!10550-107I1;0.195174!10545-107H5;0.113157!10544-107H4;0.0990863!10704-109H2;0.0518658!10510-107D6;0.109031!10558-107I9;0.317486!10020-101D2;0.847718!10732-110B3;0.352099!10049-101G4;0.249684!10698-109G5;0.155347!10437-106E5;0.184027!10417-106C3;0.0514216!10035-101E8;0.0356889!10171-103B9;0.148125!10157-103A4;0.106734!10034-101E7;0.133585!10072-101I9;0.159426!10199-103F1;0.135856!10200-103F2;0.428792!10697-109G4;0.600938!10723-110A3;0.895165!10179-103C8;0.0268109!10160-103A7;0.051981!10180-103C9;0.0311955!10162-103A9;0.00524021!10021-101D3;0.00747934!10840-111E3;0.166661!10706-109H4;0.91746!10033-101E6;0.517071!10032-101E5;0.143544!10490-107B4;0.171121!10439-106E7;0.0178589!10022-101D4;0.0335148!10176-103C5;0.638859!10469-106I1;0.111641!10067-101I4;0.0402152!10411-106B6;0.455043!10471-106I3;0.00125425!10030-101E3;0.00525193!10475-106I7;0.44333!10787-110H4;0.478576!10477-106I9;0.496916!10695-109G2;0.932201!11771-123I7;0.440442!11772-123I8;0.22291!11773-123I9;0.559319!10093-102C3;0.837767!10442-106F1;0.39994!10442-106F1;0.0433351!10201-103F3;0.126023!10639-108I9;0.204966!11843-124H7;0.067564!11841-124H5;0.431672!10693-109F9;0.459752!10436-106E4;0.548878!10483-107A6;0.0782382!10282-104F3;0.0566101!10023-101D5;0.800887!10066-101I3;0.753328!10065-101I2;0.413427!10800-110I8;0.823354!10610-108F7;0.34393!10841-111E4;0.829819!10541-107H1;0.682306!10842-111E5;0.659689!10562-108A4;0.880512!10024-101D6;0.49811!10064-101I1;0.691656!10609-108F6;0.662823!10048-101G3;0.843686!10781-110G7;0.239199!10181-103D1;0.683686!10159-103A6;0.186706!10056-101H2;0.18029!10737-110B8;0.262333!10025-101D7;0.57886!10044-101F8;0.0908174!10424-106D1;0.203449!10463-106H4;0.759191!10616-108G4;0.0648854!10486-107A9;0.28432!10062-101H8;0.233703!10202-103F4;0.410539!10158-103A5;0.398194!10441-106E9;0.190724!10031-101E4;0.509508!10063-101H9;0.159573!10063-101H9;0.202763!11763-123H8;0.272746!11765-123I1;0.9057!11768-123I4;0.849938!10807-111A6;0.659912!10790-110H7;0.723103!10798-110I6;0.789673!10786-110H3;0.133728!10591-108D6;0.198321!10593-108D8;0.187645!10590-108D5;0.143025!10026-101D8;0.0974497!10096-102C6;0.931807!10168-103B6;0.654045!10154-103A1;0.143267!10209-103G2;0.155479!10061-101H7;0.932636!10027-101D9;0.499551!10043-101F7;0.153502!10783-110G9;0.0364519!10028-101E1;0.00136776!10060-101H6;0.397603!10203-103F5;0.202315!10059-101H5;0.913806!10047-101G2;0.856828!10029-101E2;0.659205!10058-101H4;0.865197!10418-106C4;0.547487!10492-107B6;0.0552403!10694-109G1;0.159388!10797-110I5;0.836546!10057-101H3;0.022639!10100-102D1;0.776012!10055-101H1;0.403414!10204-103F6;0.521603!10191-103E2;0.455154!10563-108A5;0.287853
|name=CNhs11047_bu_f2
|name=CNhs11047_bu_f2
|tomtom_result=odd#MA0454.1;1;0.00159;0.756841;1;10;TGCCACTGCTGG;CTGCTACTGTT;-!GABPA#MA0062.2;-1;0.00210616;1.00253;1;11;TGCCACTGCTGG;GCCACTTCCGG;-!Nkx3-2#MA0122.1;-1;0.00558842;2.66009;1;9;TGCCACTGCTGG;TCCACTTAA;-!MET31#MA0333.1;0;0.00584818;2.78373;1;9;TGCCACTGCTGG;CGCCACACT;-!Myf#MA0055.1;1;0.00604162;2.87581;1;11;TGCCACTGCTGG;CAGCAGCTGCTG;+!MET4#MA0335.1;-2;0.0149921;7.13624;1;8;TGCCACTGCTGG;CCACAGTT;-!Pax4#MA0068.1;7;0.0153102;7.28766;1;12;TGCCACTGCTGG;GAAAAATTTCCCATACTCCACTCCCCCCCC;+!MET28#MA0332.1;-2;0.0153464;7.30487;1;6;TGCCACTGCTGG;CCACAG;-!YGR067C#MA0425.1;1;0.0165171;7.86215;1;12;TGCCACTGCTGG;ACCCCACTTTTTTG;+!HMG-I/Y#MA0045.1;4;0.0175449;8.35138;1;12;TGCCACTGCTGG;GTTTTTCCATTTGTTG;-!En1#MA0027.1;0;0.0209101;9.95322;1;11;TGCCACTGCTGG;GAACACTACTT;-
}}
}}

Latest revision as of 14:04, 7 September 2012

Full Name: CNhs11047_bu_f2

Motif matrix
POACGT
1410.1508537468826364.7263939870064736.60097459284633621.408094716845
2386.28984525157506642.11747966874943511.0539348436123593.4250572796494
3290.126233537385133839.1371695082885531.68198915537471.94092484254395
4244.459043641865863913.7642996976624162.14048982087604812.5224838831969
53232.8975013786066264.472815494942671282.0417372205607353.4742629494821
6179.125548634932844704.922353359509124.69458860544653124.14382644369255
7333.04762128199604281.09065952196227154.69815152545064364.049884714175
8441.32669549121863621.83391294668293616.049776947743453.67593165794756
91038.96632576394272683.2794128153914709.6022002224431701.0383782418069
10667.6597156615248736.1416180622517963.14195194750892765.9430313722983
11767.4279825194544842.06195342666072443.5285362570351079.8678448404323
12852.0545513416553855.18494181186252795.844587251419629.8022366386512

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
odd#MA0454.110.001590.756841110TGCCACTGCTGGCTGCTACTGTT-
GABPA#MA0062.2-10.002106161.00253111TGCCACTGCTGGGCCACTTCCGG-
Nkx3-2#MA0122.1-10.005588422.6600919TGCCACTGCTGGTCCACTTAA-
MET31#MA0333.100.005848182.7837319TGCCACTGCTGGCGCCACACT-
Myf#MA0055.110.006041622.87581111TGCCACTGCTGGCAGCAGCTGCTG+
MET4#MA0335.1-20.01499217.1362418TGCCACTGCTGGCCACAGTT-
Pax4#MA0068.170.01531027.28766112TGCCACTGCTGGGAAAAATTTCCCATACTCCACTCCCCCCCC+
MET28#MA0332.1-20.01534647.3048716TGCCACTGCTGGCCACAG-
YGR067C#MA0425.110.01651717.86215112TGCCACTGCTGGACCCCACTTTTTTG+
HMG-I/Y#MA0045.140.01754498.35138112TGCCACTGCTGGGTTTTTCCATTTGTTG-
En1#MA0027.100.02091019.95322111TGCCACTGCTGGGAACACTACTT-
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