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MacroAPE 1083:Motif87: Difference between revisions

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109I6;0.106442!10455-106G5;0.251364!10534-107G3;0.0557498!10429-106D6;0.0293148!10464-106H5;0.00206502!10827-111C8;0.0464117!10789-110H6;0.359679!10828-111C9;0.252232!10788-110H5;0.600153!10792-110H9;0.091594!10765-110E9;0.666336!10829-111D1;0.0512474!10830-111D2;0.170483!10831-111D3;0.101766!10832-111D4;0.179589!10833-111D5;0.0379607!10764-110E8;0.0164323!10770-110F5;0.0413828!10399-106A3;0.384819!10400-106A4;0.0225677!10405-106A9;0.0176312!10834-111D6;0.020612!10835-111D7;0.141717!10836-111D8;0.0964439!10837-111D9;0.0479966!10699-109G6;0.0950203!10802-111A1;0.0850154!10796-110I4;0.185193!10010-101C1;0.0234869!10810-111A9;0.286536!10421-106C7;0.0585795!10708-109H6;0.354776!12235-129G3;0.0950538!12236-129G4;0.0137543!12237-129G5;0.067429!10167-103B5;0.03453!10151-102I7;0.595566!10428-106D5;0.555991!10795-110I3;0.0341244!10805-111A4;0.289571!10052-101G7;0.681226!10189-103D9;0.0111238!10589-108D4;0.181936!10425-106D2;0.889811!10427-106D4;0.0954945!10702-109G9;0.0789924!10432-106D9;0.263068!10496-107C1;0.021408!10718-109I7;0.00450374!10011-101C2;0.0120686!10053-101G8;0.0415576!10686-109F2;0.68313!10084-102B3;0.648725!10012-101C3;0.291371!10085-102B4;0.278178!10482-107A5;0.632574!10419-106C5;0.926426!10080-102A8;0.418631!10760-110E4;0.0877884!10709-109H7;0.336653!10710-109H8;0.0234033!10703-109H1;0.18067!10719-109I8;0.265527!10642-109A3;0.157062!10177-103C6;0.115022!10164-103B2;0.558003!10173-103C2;0.455531!10166-103B4;0.84751!10083-102B2;0.590066!10188-103D8;0.685327!10552-107I3;0.252238!10553-107I4;0.23803!10013-101C4;0.626291!10536-107G5;0.0187889!10618-108G6;0.117004!10423-106C9;0.836454!10785-110H2;0.434958!12238-129G6;0.990253!12239-129G7;0.019114!12240-129G8;0.0094852!10416-106C2;0.0147544!10801-110I9;0.707313!10766-110F1;0.20159!10824-111C5;0.249474!10825-111C6;0.231242!10826-111C7;0.271579!10454-106G4;0.220075!10409-106B4;0.181028!10638-108I8;0.164615!10636-108I6;0.677722!10513-107D9;0.000815461!10420-106C6;0.57015!10082-102B1;0.273652!10014-101C5;0.015351!10070-101I7;0.00842015!10452-106G2;0.033106!10453-106G3;0.000789662!10449-106F8;0.00154524!10042-101F6;0.00408622!10069-101I6;0.107389!10193-103E4;0.351688!10631-108I1;0.323618!10438-106E6;0.0307428!10488-107B2;0.0109779!10196-103E7;0.114112!10071-101I8;0.00124876!10071-101I8;0.0398341!10041-101F5;0.579573!10451-106G1;0.0560806!10450-106F9;0.16903!10604-108F1;0.362561!10605-108F2;0.0330476!10606-108F3;0.0480988!10603-108E9;0.0149963!10497-107C2;0.0601393!10448-106F7;1.24538e-05!10643-109A4;0.0653053!10426-106D3;0.277445!10431-106D8;0.0285463!10197-103E8;0.309876!10443-106F2;0.010663!10815-111B5;0.397002!10816-111B6;0.312454!10817-111B7;0.233666!10015-101C6;0.399511!10410-106B5;0.00326332!10054-101G9;0.102776!10758-110E2;0.0278722!10711-109H9;0.0818927!10040-101F4;0.0072431!10470-106I2;0.549387!10415-106C1;0.0414381!10198-103E9;0.0269511!10614-108G2;0.0142057!10612-108F9;0.857881!10549-107H9;0.236784!10615-108G3;0.12471!10487-107B1;0.158696!10433-106E1;0.945661!10688-109F4;0.0668202!10444-106F3;0.0269547!10444-106F3;0.265592!10485-107A8;0.281876!10413-106B8;0.0105137!10175-103C4;0.0379353!10161-103A8;0.478674!12131-128D7;0.326293!10624-108H3;0.0723832!10712-109I1;0.797635!10205-103F7;0.218927!10206-103F8;0.322373!10207-103F9;0.393649!10050-101G5;0.833302!10051-101G6;0.067275!10016-101C7;0.530582!10046-101G1;0.52576!10778-110G4;0.631921!10633-108I3;0.208804!10818-111B8;0.27659!10819-111B9;0.875613!10820-111C1;0.947711!10484-107A7;0.902262!10808-111A7;0.4501!10169-103B7;0.146466!10153-102I9;0.775359!13425-144D5;0.375971!13433-144E4;0.423183!13437-144E8;0.719193!11904-125F5;0.682663!11905-125F6;0.687303!10039-101F3;0.301609!10791-110H8;0.466776!10017-101C8;0.373514!10045-101F9;0.000262612!10509-107D5;0.00334652!10839-111E2;0.28952!10692-109F8;0.206511!10079-102A7;0.789483!10078-102A6;0.369923!10721-110A1;0.659869!10569-108B2;0.252141!10570-108B3;0.26108!10571-108B4;0.948529!10647-109A8;0.439221!10752-110D5;0.052101!10782-110G8;0.0160437!10726-110A6;0.0225427!10018-101C9;0.0640312!10086-102B5;0.0178274!10182-103D2;0.0605957!10165-103B3;0.392677!10499-107C4;0.144387!10408-106B3;0.63833!10019-101D1;0.019969!10068-101I5;0.00678828!10075-102A3;0.00565463!10077-102A5;0.0134669!10727-110A7;0.285601!10775-110G1;0.0138235!10412-106B7;0.246108!12231-129F8;0.00318554!12232-129F9;0.033398!12233-129G1;0.0941136!12234-129G2;0.141924!10414-106B9;0.0562763!10170-103B8;0.70823!10183-103D3;0.948734!10150-102I6;0.665424!10174-103C3;0.497908!10155-103A2;0.092589!10038-101F2;0.0433457!10838-111E1;0.0533718!10759-110E3;0.0995323!10514-107E1;0.5037!10465-106H6;0.0698245!10691-109F7;0.0227267!10843-111E6;0.881741!10844-111E7;0.324017!11747-123G1;0.52345!11748-123G2;0.0655047!11749-123G3;0.0341953!11750-123G4;0.172168!11751-123G5;0.0285289!11840-124H4;0.106244!11752-123G6;0.726736!11753-123G7;0.0914195!11754-123G8;0.112789!11755-123G9;0.255928!11756-123H1;0.379919!11833-124G6;0.369692!11760-123H5;0.0596975!11836-124G9;0.575275!11758-123H3;0.598797!11835-124G8;0.931467!11762-123H7;0.752155!11838-124H2;0.336198!11757-123H2;0.0545073!11759-123H4;0.400474!11761-123H6;0.0567219!11842-124H6;0.207152!11837-124H1;0.191202!10568-108B1;0.849151!13230-141I8;0.18582!13231-141I9;0.172815!10696-109G3;0.0370144!10493-107B7;0.00136085!10494-107B8;0.458524!10850-111F4;0.361727!10851-111F5;0.127123!10852-111F6;0.770933!10853-111F7;0.765258!10854-111F8;0.232222!10855-111F9;0.0816101!10856-111G1;0.0835694!10847-111F1;0.368218!10846-111E9;0.187435!10848-111F2;0.274774!10845-111E8;0.565299!10857-111G2;0.871138!10858-111G3;0.0607841!10156-103A3;0.114794!11901-125F2;0.537674!11902-125F3;0.12466!11903-125F4;0.0476183!10689-109F5;0.0539403!10648-109A9;0.0918889!10784-110H1;0.703566!10744-110C6;0.13708!10772-110F7;0.0380545!10474-106I6;0.0188042!10600-108E6;0.579945!10684-109E9;0.0729578!12226-129F3;0.0028675!12227-129F4;0.039544!10508-107D4;0.0122527!10539-107G8;0.0214362!10607-108F4;0.00251026!10555-107I6;0.0247071!10774-110F9;0.0148235!10637-108I7;0.0574105!10663-109C6;0.0399121!10728-110A8;0.0368963!10729-110A9;0.0798687!10430-106D7;0.144569!10730-110B1;0.0276807!10813-111B3;0.410879!10812-111B2;0.0253347!10037-101F1;0.0988993!10172-103C1;0.392241!10163-103B1;0.79445!10076-102A4;0.565448!10073-102A1;0.676031!10036-101E9;0.374859!10195-103E6;0.527918!10277-104E7;0.409849!10434-106E2;0.34896!10550-107I1;0.263255!10545-107H5;0.887404!10544-107H4;0.00359018!10704-109H2;0.155139!10510-107D6;0.000599679!10558-107I9;0.0549774!10020-101D2;0.108594!10732-110B3;0.107811!10049-101G4;0.43293!10698-109G5;0.000120644!10437-106E5;0.798248!10417-106C3;0.278217!10035-101E8;0.000992187!10171-103B9;0.527367!10157-103A4;0.731113!10034-101E7;0.571161!10072-101I9;0.517598!10199-103F1;0.428881!10200-103F2;0.000707655!10697-109G4;0.077062!10723-110A3;0.116701!10179-103C8;0.116781!10160-103A7;0.420609!10180-103C9;0.416714!10162-103A9;0.126876!10021-101D3;0.233081!10840-111E3;0.0119207!10706-109H4;0.167353!10033-101E6;0.814246!10032-101E5;0.277196!10490-107B4;0.522169!10439-106E7;0.870885!10022-101D4;0.271329!10176-103C5;0.00477592!10469-106I1;0.665512!10067-101I4;0.321606!10411-106B6;0.147986!10471-106I3;2.46592e-06!10030-101E3;0.183306!10475-106I7;0.068698!10787-110H4;0.195841!10477-106I9;0.0877953!10695-109G2;0.0726576!11771-123I7;0.0587474!11772-123I8;0.706405!11773-123I9;0.530487!10093-102C3;0.239159!10442-106F1;0.000444623!10442-106F1;0.0161461!10201-103F3;0.0281309!10639-108I9;0.0072278!11843-124H7;0.00721768!11841-124H5;0.70207!10693-109F9;0.995898!10436-106E4;0.0147767!10483-107A6;0.000507614!10282-104F3;0.000276938!10023-101D5;0.997306!10066-101I3;0.845053!10065-101I2;0.45603!10800-110I8;0.0734567!10610-108F7;0.738909!10841-111E4;0.572966!10541-107H1;0.0498126!10842-111E5;0.98648!10562-108A4;0.199593!10024-101D6;0.294254!10064-101I1;0.00337372!10609-108F6;0.00606639!10048-101G3;0.115824!10781-110G7;0.442!10181-103D1;0.720806!10159-103A6;0.161371!10056-101H2;0.110017!10737-110B8;0.0924287!10025-101D7;0.415323!10044-101F8;0.209486!10424-106D1;0.254983!10463-106H4;0.0576326!10616-108G4;0.144902!10486-107A9;0.185682!10062-101H8;0.203442!10202-103F4;0.0380303!10158-103A5;0.00901918!10441-106E9;0.118014!10031-101E4;0.087114!10063-101H9;0.402329!10063-101H9;0.553803!11763-123H8;0.0380306!11765-123I1;0.844867!11768-123I4;0.990625!10807-111A6;0.754729!10790-110H7;0.479166!10798-110I6;0.445235!10786-110H3;0.382862!10591-108D6;0.111299!10593-108D8;0.383717!10590-108D5;0.0982153!10026-101D8;0.830949!10096-102C6;0.00549249!10168-103B6;0.625808!10154-103A1;0.488327!10209-103G2;0.248895!10061-101H7;0.0412647!10027-101D9;0.0343413!10043-101F7;0.909597!10783-110G9;0.125905!10028-101E1;0.32212!10060-101H6;0.000559222!10203-103F5;0.0184366!10059-101H5;0.0284637!10047-101G2;0.0757846!10029-101E2;0.0341558!10058-101H4;0.00223839!10418-106C4;0.0126382!10492-107B6;0.806207!10694-109G1;0.165368!10797-110I5;0.0192146!10057-101H3;0.674586!10100-102D1;0.0455838!10055-101H1;0.0656461!10204-103F6;0.0343781!10191-103E2;0.0743699!10563-108A5;0.157398
|name=motif87
|name=motif87
|tomtom_result=sna#MA0086.1;0;0.00168844;0.803698;1;6;CAGGAGGG;CAGGTG;+!ZEB1#MA0103.1;0;0.00630856;3.00287;1;6;CAGGAGGG;CAGGTG;-!Stat3#MA0144.1;3;0.00810158;3.85635;1;7;CAGGAGGG;TTCCAGGAAG;+!Eip74EF#MA0026.1;0;0.00939419;4.47164;1;7;CAGGAGGG;CCGGAAG;+!FEV#MA0156.1;0;0.0106065;5.04871;1;8;CAGGAGGG;CAGGAAAT;+!CTCF#MA0139.1;4;0.0106243;5.05717;1;8;CAGGAGGG;TGGCCACCAGGGGGCGCTA;+!REI1#MA0364.1;1;0.0115862;5.51501;1;6;CAGGAGGG;TCAGGGG;-!SP1#MA0079.2;1;0.0126342;6.01388;1;8;CAGGAGGG;GGGGGCGGGG;-!opa#MA0456.1;0;0.0158063;7.52378;1;8;CAGGAGGG;CAGCGGGGGGTC;-!YGR067C#MA0425.1;4;0.0167427;7.96951;1;8;CAGGAGGG;TGAAAAAGTGGGGT;-!USF1#MA0093.1;0;0.0175867;8.37125;1;7;CAGGAGGG;CACGTGG;+!USV1#MA0413.1;8;0.0182215;8.67344;1;8;CAGGAGGG;CACAAATTCAGGGGGAATTT;-
}}
}}

Latest revision as of 14:04, 7 September 2012

Full Name: motif87

Motif matrix
POACGT
0104209900
0242099000
0300420990
0400420990
0530337559906163
0600420990
0763950357040
0892870278764936

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
sna#MA0086.100.001688440.80369816CAGGAGGGCAGGTG+
ZEB1#MA0103.100.006308563.0028716CAGGAGGGCAGGTG-
Stat3#MA0144.130.008101583.8563517CAGGAGGGTTCCAGGAAG+
Eip74EF#MA0026.100.009394194.4716417CAGGAGGGCCGGAAG+
FEV#MA0156.100.01060655.0487118CAGGAGGGCAGGAAAT+
CTCF#MA0139.140.01062435.0571718CAGGAGGGTGGCCACCAGGGGGCGCTA+
REI1#MA0364.110.01158625.5150116CAGGAGGGTCAGGGG-
SP1#MA0079.210.01263426.0138818CAGGAGGGGGGGGCGGGG-
opa#MA0456.100.01580637.5237818CAGGAGGGCAGCGGGGGGTC-
YGR067C#MA0425.140.01674277.9695118CAGGAGGGTGAAAAAGTGGGGT-
USF1#MA0093.100.01758678.3712517CAGGAGGGCACGTGG+
USV1#MA0413.180.01822158.6734418CAGGAGGGCACAAATTCAGGGGGAATTT-
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