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MacroAPE 1083:Motif TNCATG: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;0;18320!02;4580;4580;4580;4580!03;0;18320;0;0!04;18320;0;0;0!05;0;0;0;18320!06;0;0;18320;0 |macroape_1083_sample_pvalues=11376-118A8;0...")
 
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0827-111C8;0.979788!10789-110H6;0.389094!10828-111C9;0.725071!10788-110H5;0.680229!10792-110H9;0.716772!10765-110E9;0.98931!10829-111D1;0.461206!10830-111D2;0.507936!10831-111D3;0.627859!10832-111D4;0.963833!10833-111D5;0.752128!10764-110E8;0.821301!10770-110F5;0.851244!10399-106A3;0.852411!10400-106A4;0.844944!10405-106A9;0.801102!10834-111D6;0.837743!10835-111D7;0.957216!10836-111D8;0.611739!10837-111D9;0.896593!10699-109G6;0.906444!10802-111A1;0.833173!10796-110I4;0.974964!10010-101C1;0.730258!10810-111A9;0.805338!10421-106C7;0.889147!10708-109H6;0.910214!12235-129G3;0.571056!12236-129G4;0.0884667!12237-129G5;0.00697651!10167-103B5;0.104455!10151-102I7;0.188254!10428-106D5;0.185096!10795-110I3;0.00382767!10805-111A4;0.824136!10052-101G7;0.346755!10189-103D9;0.840771!10589-108D4;0.297059!10425-106D2;0.72719!10427-106D4;0.912865!10702-109G9;0.844144!10432-106D9;0.262943!10496-107C1;0.799336!10718-109I7;0.241251!10011-101C2;0.841226!10053-101G8;0.357371!10686-109F2;0.0372718!10084-102B3;0.337191!10012-101C3;0.413352!10085-102B4;0.316813!10482-107A5;0.506222!10419-106C5;0.390937!10080-102A8;0.762958!10760-110E4;0.304081!10709-109H7;0.544743!10710-109H8;0.831047!10703-109H1;0.810657!10719-109I8;0.722173!10642-109A3;0.770463!10177-103C6;0.597163!10164-103B2;0.177226!10173-103C2;0.168995!10166-103B4;0.0581659!10083-102B2;0.142224!10188-103D8;0.363652!10552-107I3;0.380149!10553-107I4;0.46969!10013-101C4;0.769106!10536-107G5;0.454791!10618-108G6;0.018595!10423-106C9;0.110182!10785-110H2;0.256881!12238-129G6;0.0383747!12239-129G7;0.157764!12240-129G8;0.484544!10416-106C2;0.108858!10801-110I9;0.983761!10766-110F1;0.603803!10824-111C5;0.854433!10825-111C6;0.727752!10826-111C7;0.613994!10454-106G4;0.708531!10409-106B4;0.893354!10638-108I8;0.959953!10636-108I6;0.986635!10513-107D9;0.806163!10420-106C6;0.732166!10082-102B1;0.356606!10014-101C5;0.684985!10070-101I7;0.496449!10452-106G2;0.299354!10453-106G3;0.296332!10449-106F8;0.573744!10042-101F6;0.590576!10069-101I6;0.408983!10193-103E4;0.872485!10631-108I1;0.326795!10438-106E6;0.939688!10488-107B2;0.809657!10196-103E7;0.167!10071-101I8;0.306797!10071-101I8;0.814924!10041-101F5;0.484348!10451-106G1;0.920867!10450-106F9;0.784643!10604-108F1;0.808223!10605-108F2;0.842867!10606-108F3;0.734736!10603-108E9;0.692381!10497-107C2;0.520581!10448-106F7;0.661155!10643-109A4;0.326615!10426-106D3;0.75658!10431-106D8;0.838025!10197-103E8;0.476425!10443-106F2;0.83396!10815-111B5;0.801989!10816-111B6;0.803307!10817-111B7;0.968068!10015-101C6;0.748892!10410-106B5;0.78397!10054-101G9;0.253622!10758-110E2;0.530513!10711-109H9;0.278283!10040-101F4;0.208883!10470-106I2;0.368405!10415-106C1;0.405361!10198-103E9;0.959954!10614-108G2;0.775221!10612-108F9;0.103832!10549-107H9;0.81357!10615-108G3;0.510554!10487-107B1;0.58118!10433-106E1;0.651949!10688-109F4;0.529382!10444-106F3;0.661531!10444-106F3;0.580775!10485-107A8;0.369912!10413-106B8;0.418641!10175-103C4;0.660848!10161-103A8;0.131238!12131-128D7;0.126559!10624-108H3;0.627417!10712-109I1;0.0876363!10205-103F7;0.815627!10206-103F8;0.555063!10207-103F9;0.601039!10050-101G5;0.29941!10051-101G6;0.602643!10016-101C7;0.773526!10046-101G1;0.337092!10778-110G4;0.257036!10633-108I3;0.469906!10818-111B8;0.34793!10819-111B9;0.936927!10820-111C1;0.873007!10484-107A7;0.985655!10808-111A7;0.376619!10169-103B7;0.793311!10153-102I9;0.123695!13425-144D5;0.17568!13433-144E4;0.802112!13437-144E8;0.853831!11904-125F5;0.621584!11905-125F6;0.668857!10039-101F3;0.851067!10791-110H8;0.362206!10017-101C8;0.729531!10045-101F9;0.825785!10509-107D5;0.289944!10839-111E2;0.723131!10692-109F8;0.0449778!10079-102A7;0.814766!10078-102A6;0.609165!10721-110A1;0.41693!10569-108B2;0.82103!10570-108B3;0.202094!10571-108B4;0.0434064!10647-109A8;0.142654!10752-110D5;0.723191!10782-110G8;0.920226!10726-110A6;0.256392!10018-101C9;0.107369!10086-102B5;0.85035!10182-103D2;0.292858!10165-103B3;0.24633!10499-107C4;0.252747!10408-106B3;0.89994!10019-101D1;0.284964!10068-101I5;0.251031!10075-102A3;0.181361!10077-102A5;0.717265!10727-110A7;0.926219!10775-110G1;0.699422!10412-106B7;0.850839!12231-129F8;0.476528!12232-129F9;0.586664!12233-129G1;0.937066!12234-129G2;0.868642!10414-106B9;0.707591!10170-103B8;0.133596!10183-103D3;0.186177!10150-102I6;0.221511!10174-103C3;0.204155!10155-103A2;0.228124!10038-101F2;0.287059!10838-111E1;0.480984!10759-110E3;0.247383!10514-107E1;0.273951!10465-106H6;0.517824!10691-109F7;0.742491!10843-111E6;0.0440747!10844-111E7;0.850295!11747-123G1;0.553283!11748-123G2;0.295012!11749-123G3;0.394517!11750-123G4;0.453215!11751-123G5;0.084576!11840-124H4;0.211321!11752-123G6;0.262244!11753-123G7;0.0956926!11754-123G8;0.241661!11755-123G9;0.596881!11756-123H1;0.166733!11833-124G6;0.217137!11760-123H5;0.110189!11836-124G9;0.249879!11758-123H3;0.433186!11835-124G8;0.215376!11762-123H7;0.272963!11838-124H2;0.29931!11757-123H2;0.220455!11759-123H4;0.249973!11761-123H6;0.212893!11842-124H6;0.360783!11837-124H1;0.236508!10568-108B1;0.217732!13230-141I8;0.240221!13231-141I9;0.316602!10696-109G3;0.224392!10493-107B7;0.2954!10494-107B8;0.982609!10850-111F4;0.0845411!10851-111F5;0.904859!10852-111F6;0.105145!10853-111F7;0.0646814!10854-111F8;0.227217!10855-111F9;0.166!10856-111G1;0.201064!10847-111F1;0.232049!10846-111E9;0.0820576!10848-111F2;0.67975!10845-111E8;0.12641!10857-111G2;0.567364!10858-111G3;0.408776!10156-103A3;0.00429423!11901-125F2;0.189965!11902-125F3;0.573005!11903-125F4;0.89469!10689-109F5;0.638339!10648-109A9;0.155743!10784-110H1;0.0894864!10744-110C6;0.691605!10772-110F7;0.791074!10474-106I6;0.955141!10600-108E6;0.561827!10684-109E9;0.685473!12226-129F3;0.120962!12227-129F4;0.330973!10508-107D4;0.647433!10539-107G8;0.423926!10607-108F4;0.316811!10555-107I6;0.902199!10774-110F9;0.517985!10637-108I7;0.686156!10663-109C6;0.375128!10728-110A8;0.322128!10729-110A9;0.505801!10430-106D7;0.184615!10730-110B1;0.760852!10813-111B3;0.656615!10812-111B2;0.955351!10037-101F1;0.127536!10172-103C1;0.366796!10163-103B1;0.147878!10076-102A4;0.152404!10073-102A1;0.357774!10036-101E9;0.428986!10195-103E6;0.392173!10277-104E7;0.366997!10434-106E2;0.0854247!10550-107I1;0.451739!10545-107H5;0.793125!10544-107H4;0.0683456!10704-109H2;0.537955!10510-107D6;0.000196921!10558-107I9;0.48516!10020-101D2;0.766463!10732-110B3;0.322108!10049-101G4;0.370151!10698-109G5;0.459238!10437-106E5;0.171076!10417-106C3;0.117003!10035-101E8;0.610216!10171-103B9;0.3438!10157-103A4;0.217505!10034-101E7;0.185832!10072-101I9;0.348837!10199-103F1;0.299711!10200-103F2;0.80872!10697-109G4;0.872731!10723-110A3;0.404663!10179-103C8;0.508338!10160-103A7;0.117331!10180-103C9;0.0946469!10162-103A9;0.270135!10021-101D3;0.144721!10840-111E3;0.0148933!10706-109H4;0.93062!10033-101E6;0.00166219!10032-101E5;0.415559!10490-107B4;0.389851!10439-106E7;0.948952!10022-101D4;0.732413!10176-103C5;0.399161!10469-106I1;0.186574!10067-101I4;0.224021!10411-106B6;0.626724!10471-106I3;0.624598!10030-101E3;0.512357!10475-106I7;0.445095!10787-110H4;0.562056!10477-106I9;0.87113!10695-109G2;0.3311!11771-123I7;0.53972!11772-123I8;0.00591594!11773-123I9;0.0108332!10093-102C3;0.974345!10442-106F1;0.460891!10442-106F1;0.0579695!10201-103F3;0.00822086!10639-108I9;0.264781!11843-124H7;0.320387!11841-124H5;0.139734!10693-109F9;0.465792!10436-106E4;0.549601!10483-107A6;0.902496!10282-104F3;0.84616!10023-101D5;0.887704!10066-101I3;0.960014!10065-101I2;0.868726!10800-110I8;0.686122!10610-108F7;0.54308!10841-111E4;0.993579!10541-107H1;0.667898!10842-111E5;0.0777562!10562-108A4;0.85115!10024-101D6;0.690359!10064-101I1;0.811068!10609-108F6;0.769185!10048-101G3;0.910693!10781-110G7;0.476344!10181-103D1;0.727185!10159-103A6;0.259509!10056-101H2;0.152525!10737-110B8;0.564522!10025-101D7;0.0819213!10044-101F8;0.19665!10424-106D1;0.0834661!10463-106H4;0.600787!10616-108G4;0.971898!10486-107A9;0.883936!10062-101H8;0.736984!10202-103F4;0.229215!10158-103A5;0.835523!10441-106E9;0.142738!10031-101E4;0.501447!10063-101H9;0.407568!10063-101H9;0.475856!11763-123H8;0.628977!11765-123I1;0.115383!11768-123I4;0.0560161!10807-111A6;0.307551!10790-110H7;0.899412!10798-110I6;0.821632!10786-110H3;0.988993!10591-108D6;0.947932!10593-108D8;0.869406!10590-108D5;0.48486!10026-101D8;0.777668!10096-102C6;0.701541!10168-103B6;0.863483!10154-103A1;0.19797!10209-103G2;0.143871!10061-101H7;0.968589!10027-101D9;0.871088!10043-101F7;0.0550845!10783-110G9;0.00420645!10028-101E1;0.0826708!10060-101H6;0.0880197!10203-103F5;0.476117!10059-101H5;0.864856!10047-101G2;0.799319!10029-101E2;0.709883!10058-101H4;0.914967!10418-106C4;0.7311!10492-107B6;0.863437!10694-109G1;0.832!10797-110I5;0.711909!10057-101H3;0.496207!10100-102D1;0.555361!10055-101H1;0.538898!10204-103F6;0.304056!10191-103E2;0.0318083!10563-108A5;0.900945
|name=motif_TNCATG
|name=motif_TNCATG
|tomtom_result=MATALPHA2#MA0328.1;3;0.0020736;0.987031;1;6;TACATG;AATTACATG;-!HMRA2#MA0318.1;2;0.00480971;2.28942;1;6;TACATG;ATTACATG;-!REST#MA0138.2;6;0.0140075;6.66756;1;6;TACATG;GCGCTGTCCATGGTGCTGA;+!SOK2#MA0385.1;0;0.0153337;7.29882;1;6;TACATG;TGCCTGCAGGT;-!REST#MA0138.2;7;0.018235;8.67987;1;6;TACATG;GGCGCTGTCCATGGTGCTGAA;-
}}
}}

Latest revision as of 14:10, 7 September 2012

Full Name: motif_TNCATG

Motif matrix
POACGT
0100018320
024580458045804580
0301832000
0418320000
0500018320
0600183200

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
MATALPHA2#MA0328.130.00207360.98703116TACATGAATTACATG-
HMRA2#MA0318.120.004809712.2894216TACATGATTACATG-
REST#MA0138.260.01400756.6675616TACATGGCGCTGTCCATGGTGCTGA+
SOK2#MA0385.100.01533377.2988216TACATGTGCCTGCAGGT-
REST#MA0138.270.0182358.6798716TACATGGGCGCTGTCCATGGTGCTGAA-
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