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MacroAPE 1083:Motif GAACNT: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;4464;0!02;4464;0;0;0!03;4464;0;0;0!04;0;4464;0;0!05;1116;1116;1116;1116!06;0;0;0;4464 |macroape_1083_sample_pvalues=11376-118A8;0.3285...")
 
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106H5;0.340915!10827-111C8;0.214694!10789-110H6;0.469953!10828-111C9;0.595961!10788-110H5;0.341987!10792-110H9;0.306109!10765-110E9;0.420068!10829-111D1;0.37732!10830-111D2;0.181284!10831-111D3;0.666615!10832-111D4;0.339479!10833-111D5;0.151158!10764-110E8;0.121154!10770-110F5;0.133899!10399-106A3;0.502487!10400-106A4;0.0527117!10405-106A9;0.0775598!10834-111D6;0.078105!10835-111D7;0.313355!10836-111D8;0.30576!10837-111D9;0.23257!10699-109G6;0.23804!10802-111A1;0.142499!10796-110I4;0.352781!10010-101C1;0.481897!10810-111A9;0.758289!10421-106C7;0.435361!10708-109H6;0.0283664!12235-129G3;0.693414!12236-129G4;0.368507!12237-129G5;0.686!10167-103B5;0.363933!10151-102I7;0.301362!10428-106D5;0.345273!10795-110I3;0.439206!10805-111A4;0.169708!10052-101G7;0.548692!10189-103D9;0.716728!10589-108D4;0.57629!10425-106D2;0.62786!10427-106D4;0.19235!10702-109G9;0.0630228!10432-106D9;0.155775!10496-107C1;0.0468502!10718-109I7;0.478315!10011-101C2;0.665723!10053-101G8;0.625565!10686-109F2;0.168895!10084-102B3;0.742025!10012-101C3;0.20468!10085-102B4;0.254691!10482-107A5;0.108584!10419-106C5;0.205049!10080-102A8;0.291237!10760-110E4;0.896369!10709-109H7;0.301882!10710-109H8;0.0579547!10703-109H1;0.402257!10719-109I8;0.236389!10642-109A3;0.814617!10177-103C6;0.50727!10164-103B2;0.276387!10173-103C2;0.322036!10166-103B4;0.265066!10083-102B2;0.297467!10188-103D8;0.137296!10552-107I3;0.225871!10553-107I4;0.980797!10013-101C4;0.446302!10536-107G5;0.705784!10618-108G6;0.891684!10423-106C9;0.249622!10785-110H2;0.38057!12238-129G6;0.587797!12239-129G7;0.400759!12240-129G8;0.833637!10416-106C2;0.139543!10801-110I9;0.0812551!10766-110F1;0.100307!10824-111C5;0.195507!10825-111C6;0.124493!10826-111C7;0.118224!10454-106G4;0.145401!10409-106B4;0.348076!10638-108I8;0.180151!10636-108I6;0.558027!10513-107D9;0.362337!10420-106C6;0.636143!10082-102B1;0.998392!10014-101C5;0.482333!10070-101I7;0.876482!10452-106G2;0.500273!10453-106G3;0.407274!10449-106F8;0.264097!10042-101F6;0.228853!10069-101I6;0.349244!10193-103E4;0.797977!10631-108I1;0.303501!10438-106E6;0.0253433!10488-107B2;0.44118!10196-103E7;0.79947!10071-101I8;0.292767!10071-101I8;0.732533!10041-101F5;0.237256!10451-106G1;0.565538!10450-106F9;0.74318!10604-108F1;0.423916!10605-108F2;0.248318!10606-108F3;0.318297!10603-108E9;0.18902!10497-107C2;0.411912!10448-106F7;0.715281!10643-109A4;0.795173!10426-106D3;0.925775!10431-106D8;0.269472!10197-103E8;0.292347!10443-106F2;0.542292!10815-111B5;0.510052!10816-111B6;0.437568!10817-111B7;0.672873!10015-101C6;0.502749!10410-106B5;0.761301!10054-101G9;0.946533!10758-110E2;0.296543!10711-109H9;0.156095!10040-101F4;0.16729!10470-106I2;0.216832!10415-106C1;0.675842!10198-103E9;0.60511!10614-108G2;0.653636!10612-108F9;0.188134!10549-107H9;0.469807!10615-108G3;0.99494!10487-107B1;0.89962!10433-106E1;0.497187!10688-109F4;0.0502298!10444-106F3;0.383304!10444-106F3;0.496153!10485-107A8;0.528079!10413-106B8;0.532463!10175-103C4;0.273388!10161-103A8;0.273264!12131-128D7;0.537208!10624-108H3;0.523911!10712-109I1;0.120998!10205-103F7;0.0472608!10206-103F8;0.853704!10207-103F9;0.650281!10050-101G5;0.861822!10051-101G6;0.356416!10016-101C7;0.542598!10046-101G1;0.698682!10778-110G4;0.798578!10633-108I3;0.690006!10818-111B8;0.345216!10819-111B9;0.269244!10820-111C1;0.259075!10484-107A7;0.2431!10808-111A7;0.977906!10169-103B7;0.0613694!10153-102I9;0.256092!13425-144D5;0.348019!13433-144E4;0.904338!13437-144E8;0.914122!11904-125F5;0.600254!11905-125F6;0.199336!10039-101F3;0.281269!10791-110H8;0.202258!10017-101C8;0.382643!10045-101F9;0.413783!10509-107D5;0.327675!10839-111E2;0.511189!10692-109F8;0.686621!10079-102A7;0.47602!10078-102A6;0.475311!10721-110A1;0.819473!10569-108B2;0.617668!10570-108B3;0.265585!10571-108B4;0.218916!10647-109A8;0.412572!10752-110D5;0.806587!10782-110G8;0.181959!10726-110A6;0.460454!10018-101C9;0.374065!10086-102B5;0.47632!10182-103D2;0.472615!10165-103B3;0.299041!10499-107C4;0.446081!10408-106B3;0.714628!10019-101D1;0.721369!10068-101I5;0.970837!10075-102A3;0.643809!10077-102A5;0.722054!10727-110A7;0.333233!10775-110G1;0.0662585!10412-106B7;0.00223987!12231-129F8;0.358886!12232-129F9;0.67138!12233-129G1;0.308199!12234-129G2;0.578292!10414-106B9;0.840891!10170-103B8;0.639613!10183-103D3;0.212341!10150-102I6;0.265243!10174-103C3;0.353098!10155-103A2;0.49232!10038-101F2;0.602403!10838-111E1;0.303435!10759-110E3;0.94648!10514-107E1;0.129492!10465-106H6;0.896147!10691-109F7;0.987796!10843-111E6;0.140631!10844-111E7;0.816435!11747-123G1;0.251583!11748-123G2;0.863807!11749-123G3;0.595122!11750-123G4;0.96544!11751-123G5;0.295172!11840-124H4;0.161071!11752-123G6;0.121271!11753-123G7;0.908222!11754-123G8;0.77033!11755-123G9;0.856981!11756-123H1;0.799899!11833-124G6;0.610446!11760-123H5;0.54153!11836-124G9;0.993581!11758-123H3;0.948419!11835-124G8;0.768432!11762-123H7;0.53519!11838-124H2;0.8255!11757-123H2;0.670067!11759-123H4;0.574109!11761-123H6;0.415805!11842-124H6;0.677826!11837-124H1;0.779563!10568-108B1;0.784108!13230-141I8;0.42411!13231-141I9;0.227182!10696-109G3;0.17609!10493-107B7;0.548853!10494-107B8;0.703213!10850-111F4;0.328591!10851-111F5;0.994892!10852-111F6;0.132335!10853-111F7;0.145194!10854-111F8;0.746016!10855-111F9;0.73703!10856-111G1;0.558291!10847-111F1;0.186049!10846-111E9;0.112615!10848-111F2;0.602434!10845-111E8;0.766053!10857-111G2;0.398762!10858-111G3;0.547306!10156-103A3;0.572081!11901-125F2;0.369237!11902-125F3;0.242533!11903-125F4;0.655846!10689-109F5;0.629517!10648-109A9;0.903969!10784-110H1;0.448338!10744-110C6;0.557281!10772-110F7;0.243615!10474-106I6;0.183084!10600-108E6;0.436479!10684-109E9;0.147155!12226-129F3;0.701949!12227-129F4;0.812467!10508-107D4;0.914091!10539-107G8;0.216999!10607-108F4;0.381078!10555-107I6;0.508605!10774-110F9;0.454212!10637-108I7;0.956325!10663-109C6;0.820649!10728-110A8;0.416942!10729-110A9;0.98795!10430-106D7;0.512533!10730-110B1;0.122841!10813-111B3;0.156651!10812-111B2;0.728822!10037-101F1;0.630456!10172-103C1;0.214081!10163-103B1;0.291197!10076-102A4;0.43547!10073-102A1;0.216456!10036-101E9;0.192023!10195-103E6;0.194419!10277-104E7;0.215489!10434-106E2;0.499578!10550-107I1;0.803833!10545-107H5;0.344361!10544-107H4;0.229445!10704-109H2;0.252896!10510-107D6;0.312277!10558-107I9;0.504612!10020-101D2;0.887109!10732-110B3;0.615123!10049-101G4;0.238242!10698-109G5;0.21568!10437-106E5;0.577077!10417-106C3;0.740635!10035-101E8;0.208972!10171-103B9;0.226979!10157-103A4;0.24771!10034-101E7;0.346169!10072-101I9;0.221947!10199-103F1;0.207006!10200-103F2;0.932519!10697-109G4;0.491865!10723-110A3;0.899262!10179-103C8;0.104322!10160-103A7;0.290752!10180-103C9;0.391995!10162-103A9;0.497413!10021-101D3;0.708494!10840-111E3;0.388684!10706-109H4;0.0539332!10033-101E6;0.254035!10032-101E5;0.339571!10490-107B4;0.183279!10439-106E7;0.82193!10022-101D4;0.470035!10176-103C5;0.538304!10469-106I1;0.20274!10067-101I4;0.581593!10411-106B6;0.494617!10471-106I3;0.474583!10030-101E3;0.575169!10475-106I7;0.198308!10787-110H4;0.928784!10477-106I9;0.79614!10695-109G2;0.435273!11771-123I7;0.812439!11772-123I8;0.468677!11773-123I9;0.75505!10093-102C3;0.855282!10442-106F1;0.59588!10442-106F1;0.910791!10201-103F3;0.916657!10639-108I9;0.435859!11843-124H7;0.189196!11841-124H5;0.654847!10693-109F9;0.27838!10436-106E4;0.417473!10483-107A6;0.588556!10282-104F3;0.0787689!10023-101D5;0.919046!10066-101I3;0.745663!10065-101I2;0.598327!10800-110I8;0.699015!10610-108F7;0.629638!10841-111E4;0.400228!10541-107H1;0.58689!10842-111E5;0.602568!10562-108A4;0.402609!10024-101D6;0.708346!10064-101I1;0.646373!10609-108F6;0.878169!10048-101G3;0.219791!10781-110G7;0.492955!10181-103D1;0.643298!10159-103A6;0.352195!10056-101H2;0.569797!10737-110B8;0.241141!10025-101D7;0.957162!10044-101F8;0.62525!10424-106D1;0.924624!10463-106H4;0.0220971!10616-108G4;0.376095!10486-107A9;0.0736419!10062-101H8;0.792954!10202-103F4;0.926455!10158-103A5;0.783249!10441-106E9;0.716217!10031-101E4;0.519968!10063-101H9;0.203598!10063-101H9;0.254961!11763-123H8;0.764488!11765-123I1;0.196295!11768-123I4;0.113292!10807-111A6;0.532814!10790-110H7;0.510425!10798-110I6;0.750804!10786-110H3;0.725969!10591-108D6;0.731329!10593-108D8;0.905444!10590-108D5;0.706749!10026-101D8;0.653762!10096-102C6;0.199462!10168-103B6;0.185608!10154-103A1;0.395844!10209-103G2;0.485022!10061-101H7;0.565306!10027-101D9;0.460727!10043-101F7;0.532334!10783-110G9;0.490218!10028-101E1;0.594418!10060-101H6;0.276647!10203-103F5;0.531135!10059-101H5;0.636101!10047-101G2;0.73427!10029-101E2;0.74584!10058-101H4;0.998588!10418-106C4;0.64709!10492-107B6;0.124308!10694-109G1;0.374105!10797-110I5;0.577002!10057-101H3;0.369043!10100-102D1;0.883989!10055-101H1;0.500975!10204-103F6;0.868628!10191-103E2;0.591242!10563-108A5;0.835265
|name=motif_GAACNT
|name=motif_GAACNT
|tomtom_result=lin-14#MA0261.1;0;0.00181073;0.861909;1;6;GAACAT;GAACAC;+!NR2F1#MA0017.1;1;0.0122001;5.80724;1;6;GAACAT;TGACCTTTGAACCT;+!HSF1#MA0319.1;3;0.0131884;6.27766;1;5;GAACAT;ATGGAACA;+
}}
}}

Latest revision as of 14:11, 7 September 2012

Full Name: motif_GAACNT

Motif matrix
POACGT
010044640
024464000
034464000
040446400
051116111611161116
060004464

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

lin-14#MA0261.100.001810730.86190916GAACATGAACAC+
NR2F1#MA0017.110.01220015.8072416GAACATTGACCTTTGAACCT+
HSF1#MA0319.130.01318846.2776615GAACATATGGAACA+