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MacroAPE 1083:CNhs11756 bu f1: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;8.92888025262274;201.85774180859644;128.17291827217284;259.81318419680014!2;26.636858422012843;393.474299732572;60.98737919443553;117.674187...")
 
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A6;0.803056!10809-111A8;0.700013!10597-108E3;0.918171!10717-109I6;0.295569!10455-106G5;0.241519!10534-107G3;0.0123612!10429-106D6;0.00091935!10464-106H5;6.88344e-05!10827-111C8;0.000386102!10789-110H6;0.100342!10828-111C9;0.0134888!10788-110H5;0.122078!10792-110H9;0.00612073!10765-110E9;0.237917!10829-111D1;0.0778793!10830-111D2;0.277146!10831-111D3;0.0425118!10832-111D4;0.0105626!10833-111D5;0.0445976!10764-110E8;0.154078!10770-110F5;0.0288859!10399-106A3;0.109216!10400-106A4;0.417388!10405-106A9;0.294164!10834-111D6;0.290274!10835-111D7;0.0288989!10836-111D8;0.184188!10837-111D9;0.138017!10699-109G6;0.0105462!10802-111A1;0.0172546!10796-110I4;0.00788489!10010-101C1;0.0819092!10810-111A9;0.0677426!10421-106C7;0.120907!10708-109H6;0.119174!12235-129G3;0.067826!12236-129G4;0.248067!12237-129G5;0.343237!10167-103B5;0.119379!10151-102I7;0.628147!10428-106D5;0.587552!10795-110I3;0.57665!10805-111A4;0.0635732!10052-101G7;0.617628!10189-103D9;0.0548389!10589-108D4;0.9591!10425-106D2;0.920631!10427-106D4;0.725816!10702-109G9;0.0241352!10432-106D9;0.0168809!10496-107C1;0.386984!10718-109I7;0.9925!10011-101C2;0.188401!10053-101G8;0.0445337!10686-109F2;0.87045!10084-102B3;0.944246!10012-101C3;0.434302!10085-102B4;0.212669!10482-107A5;0.836924!10419-106C5;0.740481!10080-102A8;0.579483!10760-110E4;0.344434!10709-109H7;0.826239!10710-109H8;0.884454!10703-109H1;0.615298!10719-109I8;0.163799!10642-109A3;0.302038!10177-103C6;0.438086!10164-103B2;0.522738!10173-103C2;0.39488!10166-103B4;0.95763!10083-102B2;0.636721!10188-103D8;0.558879!10552-107I3;0.141246!10553-107I4;0.280179!10013-101C4;0.696627!10536-107G5;0.0244587!10618-108G6;0.538409!10423-106C9;0.094033!10785-110H2;0.109001!12238-129G6;0.309029!12239-129G7;0.193879!12240-129G8;0.00935079!10416-106C2;0.0255723!10801-110I9;0.0372902!10766-110F1;0.0483798!10824-111C5;0.0330445!10825-111C6;0.0158219!10826-111C7;0.0112445!10454-106G4;0.0114215!10409-106B4;0.020799!10638-108I8;0.0815745!10636-108I6;0.149785!10513-107D9;0.314761!10420-106C6;0.0430474!10082-102B1;0.0186118!10014-101C5;0.366862!10070-101I7;0.122774!10452-106G2;0.127196!10453-106G3;0.00089371!10449-106F8;0.00021996!10042-101F6;0.000242322!10069-101I6;0.349674!10193-103E4;2.65169e-05!10631-108I1;0.398341!10438-106E6;0.0176279!10488-107B2;0.86553!10196-103E7;0.420862!10071-101I8;0.0103992!10071-101I8;0.0218323!10041-101F5;0.896065!10451-106G1;0.0680756!10450-106F9;0.0442415!10604-108F1;0.0276494!10605-108F2;0.953766!10606-108F3;0.963073!10603-108E9;0.357093!10497-107C2;0.690256!10448-106F7;0.383745!10643-109A4;0.185679!10426-106D3;0.772911!10431-106D8;0.521794!10197-103E8;0.318724!10443-106F2;1.11146e-06!10815-111B5;0.330145!10816-111B6;0.0763277!10817-111B7;0.07323!10015-101C6;0.049515!10410-106B5;0.00301792!10054-101G9;0.862057!10758-110E2;0.00167697!10711-109H9;0.0779452!10040-101F4;0.0134165!10470-106I2;0.294366!10415-106C1;0.997362!10198-103E9;0.822367!10614-108G2;0.0362165!10612-108F9;0.422292!10549-107H9;0.233732!10615-108G3;0.0246693!10487-107B1;0.58!10433-106E1;0.462098!10688-109F4;0.506689!10444-106F3;0.397851!10444-106F3;0.733068!10485-107A8;0.548467!10413-106B8;0.520137!10175-103C4;0.979372!10161-103A8;0.699339!12131-128D7;0.609757!10624-108H3;0.161968!10712-109I1;0.195856!10205-103F7;0.0063871!10206-103F8;0.0034503!10207-103F9;0.0149562!10050-101G5;0.698161!10051-101G6;0.00129391!10016-101C7;0.00142917!10046-101G1;0.0243962!10778-110G4;0.213246!10633-108I3;0.0307515!10818-111B8;0.391472!10819-111B9;0.720007!10820-111C1;0.707374!10484-107A7;0.703121!10808-111A7;0.393127!10169-103B7;0.0117214!10153-102I9;0.720666!13425-144D5;0.566068!13433-144E4;0.0419193!13437-144E8;0.0502943!11904-125F5;0.0493009!11905-125F6;0.193308!10039-101F3;0.275444!10791-110H8;0.287152!10017-101C8;0.919842!10045-101F9;0.000864564!10509-107D5;0.0270357!10839-111E2;0.313678!10692-109F8;0.932169!10079-102A7;0.31015!10078-102A6;0.00207615!10721-110A1;0.0973887!10569-108B2;0.406313!10570-108B3;0.000984155!10571-108B4;4.12912e-06!10647-109A8;0.00167591!10752-110D5;0.446854!10782-110G8;0.0271621!10726-110A6;0.394749!10018-101C9;0.0770375!10086-102B5;0.0921398!10182-103D2;0.557858!10165-103B3;0.764701!10499-107C4;0.649649!10408-106B3;0.573746!10019-101D1;0.807121!10068-101I5;0.213191!10075-102A3;0.177749!10077-102A5;0.411527!10727-110A7;0.993118!10775-110G1;0.000335386!10412-106B7;0.00577069!12231-129F8;0.967241!12232-129F9;0.404661!12233-129G1;0.533164!12234-129G2;0.733461!10414-106B9;0.56467!10170-103B8;0.732033!10183-103D3;0.587259!10150-102I6;0.534566!10174-103C3;0.485098!10155-103A2;0.450703!10038-101F2;0.301329!10838-111E1;0.257843!10759-110E3;0.0980286!10514-107E1;0.217281!10465-106H6;0.0180594!10691-109F7;0.737306!10843-111E6;0.644975!10844-111E7;0.658168!11747-123G1;0.566255!11748-123G2;0.538165!11749-123G3;0.166449!11750-123G4;0.351536!11751-123G5;0.0941375!11840-124H4;0.0106872!11752-123G6;0.277054!11753-123G7;0.0306524!11754-123G8;0.0197743!11755-123G9;0.475658!11756-123H1;0.413057!11833-124G6;0.43395!11760-123H5;0.45598!11836-124G9;0.318762!11758-123H3;0.261204!11835-124G8;0.018008!11762-123H7;0.0429428!11838-124H2;0.012149!11757-123H2;0.00447162!11759-123H4;0.43097!11761-123H6;0.325463!11842-124H6;0.0759098!11837-124H1;0.32132!10568-108B1;0.0175624!13230-141I8;0.182641!13231-141I9;0.326069!10696-109G3;0.479399!10493-107B7;0.909119!10494-107B8;0.511067!10850-111F4;0.0996862!10851-111F5;0.475278!10852-111F6;0.414398!10853-111F7;0.00136531!10854-111F8;0.717638!10855-111F9;0.165751!10856-111G1;0.22701!10847-111F1;0.0919076!10846-111E9;0.513432!10848-111F2;0.752894!10845-111E8;0.595857!10857-111G2;0.585881!10858-111G3;0.847336!10156-103A3;0.921027!11901-125F2;0.509564!11902-125F3;0.0509985!11903-125F4;0.0347034!10689-109F5;0.0754901!10648-109A9;0.265396!10784-110H1;0.186332!10744-110C6;0.905062!10772-110F7;0.00107397!10474-106I6;0.0774329!10600-108E6;0.0530444!10684-109E9;0.572669!12226-129F3;0.131077!12227-129F4;0.754906!10508-107D4;0.0473272!10539-107G8;0.23942!10607-108F4;0.0214315!10555-107I6;0.0781856!10774-110F9;0.122613!10637-108I7;0.235944!10663-109C6;0.41646!10728-110A8;0.289278!10729-110A9;0.25016!10430-106D7;0.29877!10730-110B1;0.013539!10813-111B3;0.402516!10812-111B2;0.00733937!10037-101F1;0.00290952!10172-103C1;0.221968!10163-103B1;0.642881!10076-102A4;0.610556!10073-102A1;0.356539!10036-101E9;0.642572!10195-103E6;0.255335!10277-104E7;0.296768!10434-106E2;0.6588!10550-107I1;0.913984!10545-107H5;0.164456!10544-107H4;0.822572!10704-109H2;0.654435!10510-107D6;0.823676!10558-107I9;0.0979802!10020-101D2;0.409978!10732-110B3;0.121442!10049-101G4;0.305809!10698-109G5;2.61313e-05!10437-106E5;0.0111475!10417-106C3;0.891152!10035-101E8;0.607682!10171-103B9;0.30195!10157-103A4;0.638287!10034-101E7;0.512165!10072-101I9;0.33077!10199-103F1;0.37654!10200-103F2;0.0010056!10697-109G4;0.000147376!10723-110A3;0.558462!10179-103C8;0.874431!10160-103A7;0.829618!10180-103C9;0.508585!10162-103A9;0.228524!10021-101D3;0.205694!10840-111E3;0.00218923!10706-109H4;0.00042924!10033-101E6;0.658926!10032-101E5;0.316056!10490-107B4;0.253496!10439-106E7;0.496387!10022-101D4;0.792725!10176-103C5;0.029193!10469-106I1;0.388545!10067-101I4;0.0960277!10411-106B6;0.699592!10471-106I3;0.478416!10030-101E3;0.240902!10475-106I7;0.238442!10787-110H4;0.114353!10477-106I9;0.406474!10695-109G2;0.0338662!11771-123I7;0.00226654!11772-123I8;0.451433!11773-123I9;0.190435!10093-102C3;0.036832!10442-106F1;0.000115348!10442-106F1;0.382432!10201-103F3;0.40953!10639-108I9;0.0051435!11843-124H7;0.500151!11841-124H5;0.454465!10693-109F9;0.292797!10436-106E4;0.913098!10483-107A6;0.388096!10282-104F3;0.603055!10023-101D5;0.0487578!10066-101I3;0.0162334!10065-101I2;0.181691!10800-110I8;3.9164e-07!10610-108F7;0.545491!10841-111E4;0.650933!10541-107H1;0.232554!10842-111E5;0.11924!10562-108A4;0.13542!10024-101D6;0.74825!10064-101I1;0.219359!10609-108F6;0.353747!10048-101G3;0.341282!10781-110G7;0.0969196!10181-103D1;0.0702802!10159-103A6;0.852533!10056-101H2;0.690762!10737-110B8;0.26899!10025-101D7;0.280695!10044-101F8;0.474538!10424-106D1;0.518215!10463-106H4;0.0038258!10616-108G4;0.711226!10486-107A9;0.289943!10062-101H8;0.396685!10202-103F4;0.12868!10158-103A5;0.00298887!10441-106E9;0.553262!10031-101E4;0.0498388!10063-101H9;0.256251!10063-101H9;0.592345!11763-123H8;0.00812818!11765-123I1;0.00154679!11768-123I4;0.00417746!10807-111A6;0.00763606!10790-110H7;0.124818!10798-110I6;0.0211196!10786-110H3;0.000827842!10591-108D6;0.239768!10593-108D8;0.0289503!10590-108D5;0.442481!10026-101D8;0.000460908!10096-102C6;0.0025018!10168-103B6;0.727243!10154-103A1;0.969021!10209-103G2;0.610436!10061-101H7;1.1291e-06!10027-101D9;0.000203475!10043-101F7;0.0872973!10783-110G9;0.208743!10028-101E1;0.342331!10060-101H6;0.000850057!10203-103F5;0.00113371!10059-101H5;3.12955e-05!10047-101G2;3.29409e-05!10029-101E2;0.0477807!10058-101H4;0.00214395!10418-106C4;0.000396634!10492-107B6;0.57353!10694-109G1;0.567112!10797-110I5;0.0470257!10057-101H3;0.53234!10100-102D1;6.01427e-07!10055-101H1;0.209911!10204-103F6;0.280991!10191-103E2;0.238347!10563-108A5;0.0527711
|name=CNhs11756_bu_f1
|name=CNhs11756_bu_f1
|tomtom_result=ZEB1#MA0103.1;-2;0.00248694;1.18378;1;6;TCCACCTTCTCC;CACCTG;+!YGR067C#MA0425.1;2;0.00582838;2.77431;1;12;TCCACCTTCTCC;ACCCCACTTTTTTG;+!Klf4#MA0039.1;-4;0.0059555;2.83482;1;8;TCCACCTTCTCC;CCTTCCTTTA;-!SP1#MA0079.2;-2;0.00696704;3.31631;1;10;TCCACCTTCTCC;CCCCGCCCCC;+!Hltf#MA0109.1;-2;0.00947222;4.50878;1;10;TCCACCTTCTCC;AACCTTATAT;+!SPI1#MA0080.1;-5;0.0100558;4.78654;1;6;TCCACCTTCTCC;CTTCCG;-!Pax4#MA0068.1;16;0.0105051;5.0004;1;12;TCCACCTTCTCC;GAAAAATTTCCCATACTCCACTCCCCCCCC;+!TEC1#MA0406.1;-3;0.0105419;5.01796;1;8;TCCACCTTCTCC;ACATTCCC;+!MZF1_5-13#MA0057.1;1;0.0147881;7.03913;1;9;TCCACCTTCTCC;TTCCCCCTAC;-
}}
}}

Latest revision as of 14:11, 7 September 2012

Full Name: CNhs11756_bu_f1

Motif matrix
POACGT
18.92888025262274201.85774180859644128.17291827217284259.81318419680014
226.636858422012843393.47429973257260.98737919443553117.67418718117193
37.296685495548954450.81381423796985.751518309969285134.91070648670413
4292.1267857106728125.62067899717710.7080082740592323180.31725154828325
52.908971843952648534.94342596202093.425183718127865357.495143006091006
62.0933623330759854596.67936219711610.00.0
7132.418554685638412.2162570533137650.11354857837543583454.02436421286495
86.8719712680745719.162943582693135100.86910067534075471.86870900408377
90.7277897808049744520.630594140055270.231143750346697.18319685898548
10139.2558396672402175.279058238854820.0284.2378266240975
1130.06117340806067483.574097169370246.95320607695751438.18424787580407
12133.9434759908197249.13478139388520.04702699668244612215.64744014880475

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
ZEB1#MA0103.1-20.002486941.1837816TCCACCTTCTCCCACCTG+
YGR067C#MA0425.120.005828382.77431112TCCACCTTCTCCACCCCACTTTTTTG+
Klf4#MA0039.1-40.00595552.8348218TCCACCTTCTCCCCTTCCTTTA-
SP1#MA0079.2-20.006967043.31631110TCCACCTTCTCCCCCCGCCCCC+
Hltf#MA0109.1-20.009472224.50878110TCCACCTTCTCCAACCTTATAT+
SPI1#MA0080.1-50.01005584.7865416TCCACCTTCTCCCTTCCG-
Pax4#MA0068.1160.01050515.0004112TCCACCTTCTCCGAAAAATTTCCCATACTCCACTCCCCCCCC+
TEC1#MA0406.1-30.01054195.0179618TCCACCTTCTCCACATTCCC+
MZF1_5-13#MA0057.110.01478817.0391319TCCACCTTCTCCTTCCCCCTAC-
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