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MacroAPE 1083:MTF1 f1: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;15.421548117154835;12.053347280334753;3.873430962343097;3.6809623430962524!2;4.715481171548134;2.309623430962344;28.004184100418456;0.0!3;3....")
 
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55-106G5;0.504109!10534-107G3;0.326392!10429-106D6;0.900632!10464-106H5;0.0275214!10827-111C8;0.323914!10789-110H6;0.289163!10828-111C9;0.214846!10788-110H5;0.0777854!10792-110H9;0.821003!10765-110E9;0.11449!10829-111D1;0.658963!10830-111D2;0.563443!10831-111D3;0.372793!10832-111D4;0.516676!10833-111D5;0.507639!10764-110E8;0.630352!10770-110F5;0.307163!10399-106A3;0.378961!10400-106A4;0.802955!10405-106A9;0.868222!10834-111D6;0.932331!10835-111D7;0.348447!10836-111D8;0.45827!10837-111D9;0.195866!10699-109G6;0.117377!10802-111A1;0.0129406!10796-110I4;0.132841!10010-101C1;0.505246!10810-111A9;0.295951!10421-106C7;0.936268!10708-109H6;0.0792212!12235-129G3;0.636829!12236-129G4;0.944478!12237-129G5;0.528516!10167-103B5;0.610769!10151-102I7;0.178628!10428-106D5;0.411252!10795-110I3;0.937448!10805-111A4;0.350099!10052-101G7;0.636937!10189-103D9;0.618461!10589-108D4;0.273645!10425-106D2;0.826884!10427-106D4;0.976334!10702-109G9;0.579609!10432-106D9;0.943108!10496-107C1;0.0741728!10718-109I7;0.937497!10011-101C2;0.801857!10053-101G8;0.77625!10686-109F2;0.37641!10084-102B3;0.584504!10012-101C3;0.101605!10085-102B4;0.132587!10482-107A5;0.669204!10419-106C5;0.708051!10080-102A8;0.686886!10760-110E4;0.0566179!10709-109H7;0.195319!10710-109H8;0.625466!10703-109H1;0.271286!10719-109I8;0.946587!10642-109A3;0.756041!10177-103C6;0.529561!10164-103B2;0.159155!10173-103C2;0.300152!10166-103B4;0.688856!10083-102B2;0.772241!10188-103D8;0.396349!10552-107I3;0.131096!10553-107I4;0.618563!10013-101C4;0.365093!10536-107G5;0.841519!10618-108G6;0.104835!10423-106C9;0.888927!10785-110H2;0.877734!12238-129G6;0.655124!12239-129G7;0.598762!12240-129G8;0.470594!10416-106C2;0.593002!10801-110I9;0.445989!10766-110F1;0.856237!10824-111C5;0.63052!10825-111C6;0.120588!10826-111C7;0.104037!10454-106G4;0.0589685!10409-106B4;0.115453!10638-108I8;0.981625!10636-108I6;0.455275!10513-107D9;0.0435113!10420-106C6;0.195758!10082-102B1;0.643964!10014-101C5;0.0222451!10070-101I7;0.393661!10452-106G2;0.00250537!10453-106G3;0.677529!10449-106F8;0.93878!10042-101F6;0.912868!10069-101I6;0.200143!10193-103E4;0.298073!10631-108I1;0.133464!10438-106E6;0.720465!10488-107B2;0.800224!10196-103E7;0.253796!10071-101I8;0.429748!10071-101I8;0.31869!10041-101F5;0.926997!10451-106G1;0.0578409!10450-106F9;0.29451!10604-108F1;0.904001!10605-108F2;0.830956!10606-108F3;0.368682!10603-108E9;0.892526!10497-107C2;0.945087!10448-106F7;0.152454!10643-109A4;0.702114!10426-106D3;0.0105485!10431-106D8;0.198883!10197-103E8;0.255731!10443-106F2;0.835788!10815-111B5;0.593174!10816-111B6;0.970307!10817-111B7;0.893756!10015-101C6;0.893262!10410-106B5;0.671941!10054-101G9;0.218317!10758-110E2;0.287178!10711-109H9;0.664504!10040-101F4;0.837542!10470-106I2;0.321404!10415-106C1;0.281791!10198-103E9;0.788258!10614-108G2;0.174689!10612-108F9;0.218739!10549-107H9;0.649599!10615-108G3;0.0708931!10487-107B1;0.334857!10433-106E1;0.0157242!10688-109F4;0.672343!10444-106F3;0.0722153!10444-106F3;0.26747!10485-107A8;0.0960233!10413-106B8;0.113795!10175-103C4;0.00140061!10161-103A8;0.0382835!12131-128D7;0.252313!10624-108H3;0.122462!10712-109I1;0.733148!10205-103F7;0.473892!10206-103F8;0.141467!10207-103F9;0.161226!10050-101G5;0.104002!10051-101G6;0.978768!10016-101C7;0.723471!10046-101G1;0.0816332!10778-110G4;0.00226326!10633-108I3;0.751472!10818-111B8;0.677533!10819-111B9;0.287297!10820-111C1;0.35821!10484-107A7;0.313695!10808-111A7;0.156941!10169-103B7;0.112098!10153-102I9;0.2159!13425-144D5;0.35508!13433-144E4;0.780562!13437-144E8;0.636969!11904-125F5;0.529739!11905-125F6;0.535911!10039-101F3;0.504856!10791-110H8;0.271562!10017-101C8;0.743799!10045-101F9;0.240657!10509-107D5;0.899906!10839-111E2;0.68636!10692-109F8;0.774833!10079-102A7;0.673116!10078-102A6;0.73345!10721-110A1;0.530237!10569-108B2;0.779817!10570-108B3;0.310257!10571-108B4;0.113537!10647-109A8;0.311054!10752-110D5;0.797502!10782-110G8;0.574255!10726-110A6;0.352138!10018-101C9;0.290468!10086-102B5;0.247443!10182-103D2;0.0852188!10165-103B3;0.0716626!10499-107C4;0.182608!10408-106B3;0.788874!10019-101D1;0.586396!10068-101I5;0.428681!10075-102A3;0.967108!10077-102A5;0.678663!10727-110A7;0.273606!10775-110G1;0.168456!10412-106B7;0.126524!12231-129F8;0.504034!12232-129F9;0.931354!12233-129G1;0.517554!12234-129G2;0.498102!10414-106B9;0.993184!10170-103B8;0.913526!10183-103D3;0.221268!10150-102I6;0.172159!10174-103C3;0.329401!10155-103A2;0.0182431!10038-101F2;0.161953!10838-111E1;0.0660857!10759-110E3;0.565776!10514-107E1;0.576729!10465-106H6;0.362358!10691-109F7;0.888814!10843-111E6;0.832496!10844-111E7;0.937287!11747-123G1;0.778479!11748-123G2;0.708802!11749-123G3;0.651523!11750-123G4;0.939461!11751-123G5;0.50136!11840-124H4;0.809778!11752-123G6;0.932614!11753-123G7;0.953794!11754-123G8;0.796141!11755-123G9;0.619046!11756-123H1;0.664992!11833-124G6;0.429786!11760-123H5;0.919655!11836-124G9;0.602735!11758-123H3;0.648433!11835-124G8;0.573646!11762-123H7;0.992972!11838-124H2;0.684946!11757-123H2;0.395868!11759-123H4;0.186559!11761-123H6;0.774273!11842-124H6;0.584164!11837-124H1;0.537138!10568-108B1;0.955193!13230-141I8;0.567279!13231-141I9;0.811869!10696-109G3;0.907271!10493-107B7;0.0775365!10494-107B8;0.798518!10850-111F4;0.130767!10851-111F5;0.164219!10852-111F6;0.96766!10853-111F7;0.0012742!10854-111F8;0.926881!10855-111F9;0.0148907!10856-111G1;0.0365419!10847-111F1;0.0775929!10846-111E9;0.00123946!10848-111F2;0.00662348!10845-111E8;0.169479!10857-111G2;0.969415!10858-111G3;0.322979!10156-103A3;0.563396!11901-125F2;0.499772!11902-125F3;0.76482!11903-125F4;0.73427!10689-109F5;0.665098!10648-109A9;0.199931!10784-110H1;0.997561!10744-110C6;0.667834!10772-110F7;0.866093!10474-106I6;0.368932!10600-108E6;0.667092!10684-109E9;0.319355!12226-129F3;0.233433!12227-129F4;0.169981!10508-107D4;0.161698!10539-107G8;0.45617!10607-108F4;0.828883!10555-107I6;0.416855!10774-110F9;0.601378!10637-108I7;0.487269!10663-109C6;0.544924!10728-110A8;0.471818!10729-110A9;0.231863!10430-106D7;0.872515!10730-110B1;0.360596!10813-111B3;0.795197!10812-111B2;0.792881!10037-101F1;0.957426!10172-103C1;0.270019!10163-103B1;0.289081!10076-102A4;0.431368!10073-102A1;0.263383!10036-101E9;0.96387!10195-103E6;0.168944!10277-104E7;0.261138!10434-106E2;0.747953!10550-107I1;0.989415!10545-107H5;0.726834!10544-107H4;0.573826!10704-109H2;0.205803!10510-107D6;0.122479!10558-107I9;0.891959!10020-101D2;0.0227864!10732-110B3;0.69948!10049-101G4;0.52083!10698-109G5;0.37835!10437-106E5;0.473925!10417-106C3;0.499015!10035-101E8;0.292427!10171-103B9;0.276454!10157-103A4;0.147374!10034-101E7;0.304483!10072-101I9;0.260411!10199-103F1;0.928788!10200-103F2;0.363025!10697-109G4;0.893287!10723-110A3;0.121654!10179-103C8;0.606966!10160-103A7;0.751067!10180-103C9;0.918343!10162-103A9;0.694245!10021-101D3;0.829211!10840-111E3;0.152404!10706-109H4;0.397813!10033-101E6;0.695074!10032-101E5;0.228182!10490-107B4;0.196058!10439-106E7;0.169628!10022-101D4;0.428066!10176-103C5;0.338037!10469-106I1;0.265522!10067-101I4;0.943078!10411-106B6;0.714383!10471-106I3;0.382788!10030-101E3;0.49422!10475-106I7;0.126408!10787-110H4;0.897322!10477-106I9;0.528373!10695-109G2;0.0602305!11771-123I7;0.127741!11772-123I8;0.885333!11773-123I9;0.607802!10093-102C3;0.331472!10442-106F1;0.0484022!10442-106F1;0.828936!10201-103F3;0.94961!10639-108I9;0.942228!11843-124H7;0.00226542!11841-124H5;0.146075!10693-109F9;0.654033!10436-106E4;0.0270767!10483-107A6;0.437203!10282-104F3;0.210471!10023-101D5;0.455734!10066-101I3;0.474575!10065-101I2;0.350298!10800-110I8;0.89026!10610-108F7;0.754477!10841-111E4;0.648133!10541-107H1;0.909203!10842-111E5;0.607907!10562-108A4;0.636388!10024-101D6;0.839868!10064-101I1;0.206121!10609-108F6;0.392234!10048-101G3;0.887271!10781-110G7;0.744823!10181-103D1;0.741983!10159-103A6;0.0216355!10056-101H2;0.142746!10737-110B8;0.226046!10025-101D7;0.573787!10044-101F8;0.981749!10424-106D1;0.643888!10463-106H4;0.276169!10616-108G4;0.377727!10486-107A9;0.689339!10062-101H8;0.471416!10202-103F4;0.418338!10158-103A5;0.616204!10441-106E9;0.331742!10031-101E4;0.602339!10063-101H9;0.155718!10063-101H9;0.948615!11763-123H8;0.0338105!11765-123I1;0.774546!11768-123I4;0.854334!10807-111A6;0.907014!10790-110H7;0.936353!10798-110I6;0.517955!10786-110H3;1.80779e-05!10591-108D6;0.405237!10593-108D8;0.355081!10590-108D5;0.551422!10026-101D8;0.0332988!10096-102C6;0.58428!10168-103B6;0.50088!10154-103A1;0.0442422!10209-103G2;0.292824!10061-101H7;0.891159!10027-101D9;0.719429!10043-101F7;0.035999!10783-110G9;0.0323859!10028-101E1;0.241724!10060-101H6;0.000204284!10203-103F5;0.425011!10059-101H5;0.873771!10047-101G2;0.572356!10029-101E2;0.889!10058-101H4;0.201623!10418-106C4;0.603482!10492-107B6;0.444636!10694-109G1;0.203427!10797-110I5;0.72757!10057-101H3;0.289222!10100-102D1;0.657399!10055-101H1;0.826999!10204-103F6;0.554939!10191-103E2;0.937281!10563-108A5;0.878544
|name=MTF1_f1
|name=MTF1_f1
|tomtom_result=AFT1#MA0269.1;0;0.000175014;0.0833067;0.166613;17;AGTGCCGTGTGCAAAAC;CCAATCGGGTGCAATATGTAA;-!STP2#MA0395.1;5;0.0066535;3.16707;1;15;AGTGCCGTGTGCAAAAC;TGATCGGCGCCGCACGACGA;+!MAC1#MA0326.1;-7;0.00882667;4.20149;1;8;AGTGCCGTGTGCAAAAC;TGAGCAAA;-!Myc#MA0147.1;-3;0.0110863;5.27708;1;10;AGTGCCGTGTGCAAAAC;GCCACGTGCG;-!Mycn#MA0104.2;-3;0.0131997;6.28307;1;10;AGTGCCGTGTGCAAAAC;GCCACGTGCG;-!slbo#MA0244.1;-7;0.0143598;6.83527;1;8;AGTGCCGTGTGCAAAAC;TTTGCAAT;-!NRG1#MA0347.1;2;0.0183693;8.74378;1;17;AGTGCCGTGTGCAAAAC;CTAGATCAGGGTCCATCGCA;+!RTG3#MA0376.1;4;0.0197895;9.4198;1;16;AGTGCCGTGTGCAAAAC;GACTAAGCACGTGCTAATAT;-
}}
}}

Latest revision as of 14:16, 7 September 2012

Full Name: MTF1_f1

Motif matrix
POACGT
115.42154811715483512.0533472803347533.8734309623430973.6809623430962524
24.7154811715481342.30962343096234428.0041841004184560.0
33.2719665271966550.962343096234311513.2803347280334817.51464435146445
47.5062761506276115.96652719665271420.8828451882845340.6736401673640163
57.60251046025105218.9581589958159071.53974895397489836.9288702928870425
62.983263598326363629.6401673640167580.86610878661087851.5397489539748983
70.00.035.02928870292890.0
83.3682008368200880.86610878661087854.52301255230125526.271966527196675
90.00.962343096234311534.066945606694610.0
100.011.4518828451882970.023.577405857740604
110.00.035.02928870292890.0
120.034.163179916318050.00.8661087866108785
1335.02928870292890.00.00.0
1418.6694560669456244.330543933054416.2552301255230335.774058577405869
1522.1338912133891459.5271966527196761.82845188284519011.5397489539748983
1614.3389121338912153.65690376569036610.2970711297071246.736401673640163
174.18619246861926815.2531380753138410.922594142259434.667364016736397

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
AFT1#MA0269.100.0001750140.08330670.16661317AGTGCCGTGTGCAAAACCCAATCGGGTGCAATATGTAA-
STP2#MA0395.150.00665353.16707115AGTGCCGTGTGCAAAACTGATCGGCGCCGCACGACGA+
MAC1#MA0326.1-70.008826674.2014918AGTGCCGTGTGCAAAACTGAGCAAA-
Myc#MA0147.1-30.01108635.27708110AGTGCCGTGTGCAAAACGCCACGTGCG-
Mycn#MA0104.2-30.01319976.28307110AGTGCCGTGTGCAAAACGCCACGTGCG-
slbo#MA0244.1-70.01435986.8352718AGTGCCGTGTGCAAAACTTTGCAAT-
NRG1#MA0347.120.01836938.74378117AGTGCCGTGTGCAAAACCTAGATCAGGGTCCATCGCA+
RTG3#MA0376.140.01978959.4198116AGTGCCGTGTGCAAAACGACTAAGCACGTGCTAATAT-
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