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MacroAPE 1083:CNhs11862 bl f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;302.93716216730814;291.27214915705144;440.6886444028232;619.3586927392006!2;71.1491668849413;817.8715467541249;273.41970897230226;491.816225...")
 
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0827-111C8;0.167211!10789-110H6;0.246787!10828-111C9;0.206996!10788-110H5;0.357569!10792-110H9;0.0694644!10765-110E9;0.261968!10829-111D1;0.140744!10830-111D2;0.121651!10831-111D3;0.161371!10832-111D4;0.256581!10833-111D5;0.0610621!10764-110E8;0.133548!10770-110F5;0.0876035!10399-106A3;0.146527!10400-106A4;0.144676!10405-106A9;0.163524!10834-111D6;0.156613!10835-111D7;0.119096!10836-111D8;0.37129!10837-111D9;0.256639!10699-109G6;0.612238!10802-111A1;0.214955!10796-110I4;0.3934!10010-101C1;0.363837!10810-111A9;0.138993!10421-106C7;0.142765!10708-109H6;0.666793!12235-129G3;0.0568589!12236-129G4;0.201566!12237-129G5;0.492531!10167-103B5;0.0594321!10151-102I7;0.85149!10428-106D5;0.759259!10795-110I3;0.129326!10805-111A4;0.0807555!10052-101G7;0.121187!10189-103D9;0.185452!10589-108D4;0.266135!10425-106D2;0.779882!10427-106D4;0.221969!10702-109G9;0.303832!10432-106D9;0.517217!10496-107C1;0.918477!10718-109I7;0.841342!10011-101C2;0.0537236!10053-101G8;0.176611!10686-109F2;0.679534!10084-102B3;0.480819!10012-101C3;0.569163!10085-102B4;0.386116!10482-107A5;0.412928!10419-106C5;0.147929!10080-102A8;0.335156!10760-110E4;0.541646!10709-109H7;0.919668!10710-109H8;0.550335!10703-109H1;0.492261!10719-109I8;0.137206!10642-109A3;0.0107032!10177-103C6;0.0267747!10164-103B2;0.372869!10173-103C2;0.565429!10166-103B4;0.497662!10083-102B2;0.618721!10188-103D8;0.695499!10552-107I3;0.484499!10553-107I4;0.0735377!10013-101C4;0.997891!10536-107G5;0.0742718!10618-108G6;0.283671!10423-106C9;0.0649335!10785-110H2;0.250468!12238-129G6;0.310191!12239-129G7;0.292541!12240-129G8;0.350851!10416-106C2;0.157617!10801-110I9;0.173605!10766-110F1;0.319763!10824-111C5;0.500653!10825-111C6;0.334306!10826-111C7;0.320011!10454-106G4;0.381777!10409-106B4;0.265496!10638-108I8;0.401854!10636-108I6;0.138259!10513-107D9;0.830551!10420-106C6;0.529598!10082-102B1;0.0459834!10014-101C5;0.307217!10070-101I7;0.0586003!10452-106G2;0.383296!10453-106G3;0.295803!10449-106F8;0.307503!10042-101F6;0.350227!10069-101I6;0.227442!10193-103E4;0.00166613!10631-108I1;0.3068!10438-106E6;0.194265!10488-107B2;0.638021!10196-103E7;0.246204!10071-101I8;0.191027!10071-101I8;0.0937576!10041-101F5;0.338836!10451-106G1;0.246885!10450-106F9;0.0331731!10604-108F1;0.037151!10605-108F2;0.0263428!10606-108F3;0.00653732!10603-108E9;0.00924542!10497-107C2;0.182889!10448-106F7;0.947596!10643-109A4;0.0910183!10426-106D3;0.996466!10431-106D8;0.51943!10197-103E8;0.5765!10443-106F2;0.0223531!10815-111B5;0.220826!10816-111B6;0.308863!10817-111B7;0.215809!10015-101C6;0.248099!10410-106B5;0.0208932!10054-101G9;0.0988363!10758-110E2;0.0845732!10711-109H9;0.0284857!10040-101F4;0.00792627!10470-106I2;0.497444!10415-106C1;0.357!10198-103E9;0.244348!10614-108G2;0.129925!10612-108F9;0.752306!10549-107H9;0.714119!10615-108G3;0.107118!10487-107B1;0.168036!10433-106E1;0.358979!10688-109F4;0.243982!10444-106F3;0.810655!10444-106F3;0.941487!10485-107A8;0.855651!10413-106B8;0.00365396!10175-103C4;0.181165!10161-103A8;0.33878!12131-128D7;0.316378!10624-108H3;0.0328416!10712-109I1;0.401132!10205-103F7;0.260431!10206-103F8;0.0322972!10207-103F9;0.0121797!10050-101G5;0.155322!10051-101G6;0.0115049!10016-101C7;0.007001!10046-101G1;0.0166492!10778-110G4;0.0160517!10633-108I3;0.421673!10818-111B8;0.258519!10819-111B9;0.070523!10820-111C1;0.0677589!10484-107A7;0.0790923!10808-111A7;0.0203846!10169-103B7;0.207047!10153-102I9;0.607503!13425-144D5;0.564306!13433-144E4;0.00504884!13437-144E8;0.0043034!11904-125F5;0.00948372!11905-125F6;0.670037!10039-101F3;0.722669!10791-110H8;0.540066!10017-101C8;0.754289!10045-101F9;0.0180857!10509-107D5;0.125327!10839-111E2;0.319336!10692-109F8;0.054926!10079-102A7;0.282613!10078-102A6;0.0235631!10721-110A1;0.0166046!10569-108B2;0.22145!10570-108B3;0.493479!10571-108B4;0.585486!10647-109A8;0.334333!10752-110D5;0.357831!10782-110G8;0.195265!10726-110A6;0.316786!10018-101C9;0.00993352!10086-102B5;0.10049!10182-103D2;0.354847!10165-103B3;0.414942!10499-107C4;0.320834!10408-106B3;0.389029!10019-101D1;0.765214!10068-101I5;0.143059!10075-102A3;0.134299!10077-102A5;0.272362!10727-110A7;0.471223!10775-110G1;0.292849!10412-106B7;0.657387!12231-129F8;0.853937!12232-129F9;0.850435!12233-129G1;0.708387!12234-129G2;0.899028!10414-106B9;0.878236!10170-103B8;0.435753!10183-103D3;0.808193!10150-102I6;0.705321!10174-103C3;0.614748!10155-103A2;0.194669!10038-101F2;0.246202!10838-111E1;0.159635!10759-110E3;0.0288308!10514-107E1;0.0376283!10465-106H6;0.639813!10691-109F7;0.422707!10843-111E6;0.919211!10844-111E7;0.261592!11747-123G1;0.311283!11748-123G2;0.661232!11749-123G3;0.895948!11750-123G4;0.790068!11751-123G5;0.6584!11840-124H4;0.980395!11752-123G6;0.893575!11753-123G7;0.861293!11754-123G8;0.670363!11755-123G9;0.866128!11756-123H1;0.877913!11833-124G6;0.371157!11760-123H5;0.847178!11836-124G9;0.676631!11758-123H3;0.834871!11835-124G8;0.258805!11762-123H7;0.367085!11838-124H2;0.59968!11757-123H2;0.466488!11759-123H4;0.204506!11761-123H6;0.910093!11842-124H6;0.360259!11837-124H1;0.846891!10568-108B1;0.500937!13230-141I8;0.645701!13231-141I9;0.310413!10696-109G3;0.260865!10493-107B7;0.776477!10494-107B8;0.367124!10850-111F4;0.87165!10851-111F5;0.0924872!10852-111F6;0.226434!10853-111F7;0.587987!10854-111F8;0.0149312!10855-111F9;0.0835832!10856-111G1;0.423686!10847-111F1;0.694765!10846-111E9;0.0722311!10848-111F2;0.784322!10845-111E8;0.144174!10857-111G2;0.152776!10858-111G3;0.200329!10156-103A3;0.097978!11901-125F2;0.502851!11902-125F3;0.489594!11903-125F4;0.513351!10689-109F5;0.60966!10648-109A9;0.0846087!10784-110H1;0.0673739!10744-110C6;0.621579!10772-110F7;0.618776!10474-106I6;0.124521!10600-108E6;0.569699!10684-109E9;0.0270211!12226-129F3;0.153018!12227-129F4;0.302055!10508-107D4;0.0150358!10539-107G8;0.0135602!10607-108F4;0.0766036!10555-107I6;0.0119529!10774-110F9;0.00909018!10637-108I7;0.0165393!10663-109C6;0.00275201!10728-110A8;0.00814958!10729-110A9;0.00363144!10430-106D7;0.750174!10730-110B1;0.153738!10813-111B3;0.402139!10812-111B2;0.440527!10037-101F1;0.51424!10172-103C1;0.464393!10163-103B1;0.827981!10076-102A4;0.555299!10073-102A1;0.746021!10036-101E9;0.199142!10195-103E6;0.491109!10277-104E7;0.510574!10434-106E2;0.206401!10550-107I1;0.999177!10545-107H5;0.266149!10544-107H4;0.248088!10704-109H2;0.95078!10510-107D6;0.927276!10558-107I9;0.0221586!10020-101D2;0.0669688!10732-110B3;0.290582!10049-101G4;0.430496!10698-109G5;0.491856!10437-106E5;0.520112!10417-106C3;0.0101515!10035-101E8;0.213501!10171-103B9;0.466733!10157-103A4;0.795101!10034-101E7;0.687558!10072-101I9;0.47971!10199-103F1;0.308614!10200-103F2;0.0436906!10697-109G4;0.0124577!10723-110A3;0.000103558!10179-103C8;0.707634!10160-103A7;0.315551!10180-103C9;0.215385!10162-103A9;0.235406!10021-101D3;0.454561!10840-111E3;0.229523!10706-109H4;0.403943!10033-101E6;0.113057!10032-101E5;0.26382!10490-107B4;0.495502!10439-106E7;0.158135!10022-101D4;0.281308!10176-103C5;0.181566!10469-106I1;0.600203!10067-101I4;0.787408!10411-106B6;0.639873!10471-106I3;0.911398!10030-101E3;0.00728751!10475-106I7;0.139279!10787-110H4;0.0796126!10477-106I9;0.0792158!10695-109G2;0.251789!11771-123I7;0.96358!11772-123I8;0.541665!11773-123I9;0.899512!10093-102C3;0.189516!10442-106F1;0.0398734!10442-106F1;0.370375!10201-103F3;0.346466!10639-108I9;0.233473!11843-124H7;0.822156!11841-124H5;0.107887!10693-109F9;0.532357!10436-106E4;0.572293!10483-107A6;0.806152!10282-104F3;0.617038!10023-101D5;0.000128589!10066-101I3;0.000150217!10065-101I2;0.0178577!10800-110I8;0.00731914!10610-108F7;0.181698!10841-111E4;0.635628!10541-107H1;0.0155469!10842-111E5;0.145194!10562-108A4;0.0405339!10024-101D6;0.681977!10064-101I1;0.0240778!10609-108F6;0.0875488!10048-101G3;0.910265!10781-110G7;0.393933!10181-103D1;0.45962!10159-103A6;0.410624!10056-101H2;0.23742!10737-110B8;0.334963!10025-101D7;0.521698!10044-101F8;0.157665!10424-106D1;0.115901!10463-106H4;0.484438!10616-108G4;0.967059!10486-107A9;0.577727!10062-101H8;0.949895!10202-103F4;0.174918!10158-103A5;0.0158982!10441-106E9;0.260909!10031-101E4;0.0285761!10063-101H9;0.482325!10063-101H9;0.347607!11763-123H8;0.0420528!11765-123I1;0.645647!11768-123I4;0.850114!10807-111A6;0.394864!10790-110H7;0.00758514!10798-110I6;0.005749!10786-110H3;0.0737983!10591-108D6;0.0495484!10593-108D8;0.0149762!10590-108D5;0.184513!10026-101D8;0.160042!10096-102C6;0.355335!10168-103B6;0.52497!10154-103A1;0.45437!10209-103G2;0.343193!10061-101H7;0.000668852!10027-101D9;0.0289661!10043-101F7;0.881496!10783-110G9;0.533519!10028-101E1;0.0130422!10060-101H6;0.0728965!10203-103F5;0.0502743!10059-101H5;0.0006342!10047-101G2;0.000507453!10029-101E2;0.00911578!10058-101H4;0.0311909!10418-106C4;0.0160215!10492-107B6;0.392446!10694-109G1;0.0413096!10797-110I5;0.444443!10057-101H3;0.385618!10100-102D1;0.0112295!10055-101H1;0.218166!10204-103F6;0.0998848!10191-103E2;0.265238!10563-108A5;0.0708858
|name=CNhs11862_bl_f2
|name=CNhs11862_bl_f2
|tomtom_result=Mafb#MA0117.1;0;0.00165929;0.789822;1;8;TCCTCAGCT;GCGTCAGC;-!TOD6#MA0350.1;1;0.00591714;2.81656;1;9;TCCTCAGCT;AGGCACAGCTCATCGCGTTTT;+!DOT6#MA0351.1;1;0.00632092;3.00876;1;9;TCCTCAGCT;TTCTGCACCTCATCGCATCCT;+!NHLH1#MA0048.1;-1;0.00658061;3.13237;1;8;TCCTCAGCT;GCGCAGCTGCGT;+!CHA4#MA0283.1;-1;0.00861174;4.09919;1;8;TCCTCAGCT;TCTCCGCC;-!YPR022C#MA0436.1;-1;0.0155613;7.40717;1;7;TCCTCAGCT;CCCCACG;+
}}
}}

Latest revision as of 14:20, 7 September 2012

Full Name: CNhs11862_bl_f2

Motif matrix
POACGT
1302.93716216730814291.27214915705144440.6886444028232619.3586927392006
271.1491668849413817.8715467541249273.41970897230226491.8162258550152
36.6765682109050541413.30845833857054.738036711212074229.53358520569506
43.9863139406618275349.30345609810510.87058594554882811300.0962924820678
50.01654.25664846638370.00.0
61654.25664846638370.00.00.0
790.94836628769146646.3036137343507873.931175063186643.073493381155785
8175.172940737874061416.04283694889244.9209676338647818.119903145752545
9310.50229764846495602.768469175053714.687291889229932726.2985897536346

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Mafb#MA0117.100.001659290.78982218TCCTCAGCTGCGTCAGC-
TOD6#MA0350.110.005917142.8165619TCCTCAGCTAGGCACAGCTCATCGCGTTTT+
DOT6#MA0351.110.006320923.0087619TCCTCAGCTTTCTGCACCTCATCGCATCCT+
NHLH1#MA0048.1-10.006580613.1323718TCCTCAGCTGCGCAGCTGCGT+
CHA4#MA0283.1-10.008611744.0991918TCCTCAGCTTCTCCGCC-
YPR022C#MA0436.1-10.01556137.4071717TCCTCAGCTCCCCACG+
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