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MacroAPE 1083:CNhs11853 bu f1: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;61.323244072311034;315.9961992099769;414.22256567669535;276.31223136522647!2;6.839148671225296;687.1171064903995;227.88755841462566;146.0104...")
 
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28I8;0.172183!12182-129A4;0.283222!12183-129A5;0.19299!12184-129A6;0.130598!10809-111A8;0.170827!10597-108E3;0.948268!10717-109I6;0.214301!10455-106G5;0.0394608!10534-107G3;0.259704!10429-106D6;0.311258!10464-106H5;0.420471!10827-111C8;0.0890395!10789-110H6;0.81474!10828-111C9;0.681577!10788-110H5;0.999003!10792-110H9;0.645393!10765-110E9;0.606094!10829-111D1;0.916727!10830-111D2;0.873757!10831-111D3;0.459131!10832-111D4;0.888873!10833-111D5;0.404144!10764-110E8;0.394508!10770-110F5;0.205449!10399-106A3;0.323753!10400-106A4;0.506486!10405-106A9;0.420715!10834-111D6;0.466504!10835-111D7;0.784944!10836-111D8;0.260363!10837-111D9;0.180389!10699-109G6;0.44664!10802-111A1;0.862147!10796-110I4;0.326193!10010-101C1;0.761755!10810-111A9;0.242705!10421-106C7;0.0551602!10708-109H6;0.436851!12235-129G3;0.010908!12236-129G4;0.111494!12237-129G5;0.0932765!10167-103B5;0.125566!10151-102I7;0.991779!10428-106D5;0.845273!10795-110I3;0.488771!10805-111A4;0.191115!10052-101G7;0.153229!10189-103D9;0.295513!10589-108D4;0.33208!10425-106D2;0.936051!10427-106D4;0.523507!10702-109G9;0.118875!10432-106D9;0.0432066!10496-107C1;0.470156!10718-109I7;0.767479!10011-101C2;0.403925!10053-101G8;0.163461!10686-109F2;0.13197!10084-102B3;0.0910249!10012-101C3;0.844013!10085-102B4;0.79366!10482-107A5;0.943073!10419-106C5;0.118096!10080-102A8;0.145463!10760-110E4;0.829561!10709-109H7;0.506801!10710-109H8;0.562133!10703-109H1;0.563355!10719-109I8;0.315877!10642-109A3;0.501129!10177-103C6;0.693785!10164-103B2;0.911594!10173-103C2;0.882093!10166-103B4;0.880157!10083-102B2;0.706001!10188-103D8;0.791923!10552-107I3;0.919062!10553-107I4;0.901625!10013-101C4;0.131224!10536-107G5;0.0381366!10618-108G6;0.323632!10423-106C9;0.053907!10785-110H2;0.749703!12238-129G6;0.255593!12239-129G7;0.17081!12240-129G8;0.10619!10416-106C2;0.252967!10801-110I9;0.334907!10766-110F1;0.756585!10824-111C5;0.952228!10825-111C6;0.247126!10826-111C7;0.27742!10454-106G4;0.296221!10409-106B4;0.548249!10638-108I8;0.781505!10636-108I6;0.0699033!10513-107D9;0.112504!10420-106C6;0.737613!10082-102B1;0.168359!10014-101C5;0.176333!10070-101I7;0.061862!10452-106G2;0.135328!10453-106G3;0.135746!10449-106F8;0.129187!10042-101F6;0.13269!10069-101I6;0.51535!10193-103E4;0.0393733!10631-108I1;0.740273!10438-106E6;0.375583!10488-107B2;0.482244!10196-103E7;0.348858!10071-101I8;0.191526!10071-101I8;0.0156808!10041-101F5;0.910654!10451-106G1;0.171874!10450-106F9;0.0259479!10604-108F1;0.031594!10605-108F2;0.013422!10606-108F3;0.0072069!10603-108E9;0.00495617!10497-107C2;0.039235!10448-106F7;0.271941!10643-109A4;0.478851!10426-106D3;0.121057!10431-106D8;0.544705!10197-103E8;0.0617586!10443-106F2;0.147711!10815-111B5;0.42943!10816-111B6;0.884609!10817-111B7;0.659111!10015-101C6;0.713998!10410-106B5;0.0582324!10054-101G9;0.83157!10758-110E2;0.0878891!10711-109H9;0.420378!10040-101F4;0.279587!10470-106I2;0.79688!10415-106C1;0.120133!10198-103E9;0.633138!10614-108G2;0.0368371!10612-108F9;0.995522!10549-107H9;0.916718!10615-108G3;0.19779!10487-107B1;0.629009!10433-106E1;0.3318!10688-109F4;0.461403!10444-106F3;0.920526!10444-106F3;0.918016!10485-107A8;0.890594!10413-106B8;0.62528!10175-103C4;0.293037!10161-103A8;0.959891!12131-128D7;0.784609!10624-108H3;0.153677!10712-109I1;0.800835!10205-103F7;0.228161!10206-103F8;0.100039!10207-103F9;0.101208!10050-101G5;0.277882!10051-101G6;0.178752!10016-101C7;0.24725!10046-101G1;0.321373!10778-110G4;0.126627!10633-108I3;0.0468988!10818-111B8;0.107524!10819-111B9;0.356814!10820-111C1;0.358175!10484-107A7;0.363328!10808-111A7;0.372858!10169-103B7;0.728586!10153-102I9;0.985717!13425-144D5;0.816339!13433-144E4;0.12168!13437-144E8;0.0861441!11904-125F5;0.0887839!11905-125F6;0.0477269!10039-101F3;0.000915316!10791-110H8;0.823217!10017-101C8;0.953724!10045-101F9;0.463273!10509-107D5;0.580714!10839-111E2;0.766925!10692-109F8;0.663909!10079-102A7;0.0109644!10078-102A6;0.0813195!10721-110A1;0.264519!10569-108B2;0.513434!10570-108B3;0.0772704!10571-108B4;0.1302!10647-109A8;0.0120138!10752-110D5;0.015103!10782-110G8;0.549807!10726-110A6;0.0321333!10018-101C9;0.0768392!10086-102B5;0.365602!10182-103D2;0.727071!10165-103B3;0.937168!10499-107C4;0.818667!10408-106B3;0.984564!10019-101D1;0.190492!10068-101I5;0.404555!10075-102A3;0.0230526!10077-102A5;0.297694!10727-110A7;0.901205!10775-110G1;0.352267!10412-106B7;0.40107!12231-129F8;0.453394!12232-129F9;0.841858!12233-129G1;0.648665!12234-129G2;0.819898!10414-106B9;0.63623!10170-103B8;0.422294!10183-103D3;0.977751!10150-102I6;0.990847!10174-103C3;0.98703!10155-103A2;0.786376!10038-101F2;0.56019!10838-111E1;0.56083!10759-110E3;0.118246!10514-107E1;0.0193419!10465-106H6;0.0361363!10691-109F7;0.193217!10843-111E6;0.00680052!10844-111E7;0.0322286!11747-123G1;0.0995297!11748-123G2;0.00255967!11749-123G3;0.0042718!11750-123G4;0.0183077!11751-123G5;0.00914789!11840-124H4;0.00128868!11752-123G6;0.000138547!11753-123G7;0.0350958!11754-123G8;0.0187519!11755-123G9;0.000753478!11756-123H1;0.255118!11833-124G6;0.309003!11760-123H5;0.562296!11836-124G9;0.46292!11758-123H3;0.00336152!11835-124G8;0.11793!11762-123H7;0.0836888!11838-124H2;0.752116!11757-123H2;0.716491!11759-123H4;0.572986!11761-123H6;0.108269!11842-124H6;0.65399!11837-124H1;0.157585!10568-108B1;0.0841564!13230-141I8;0.0902182!13231-141I9;0.000708363!10696-109G3;0.000272386!10493-107B7;0.100114!10494-107B8;0.000686929!10850-111F4;0.297183!10851-111F5;0.0408937!10852-111F6;0.353597!10853-111F7;0.44416!10854-111F8;0.0981806!10855-111F9;0.020294!10856-111G1;0.906161!10847-111F1;0.0352041!10846-111E9;0.115996!10848-111F2;0.0142423!10845-111E8;0.0646853!10857-111G2;0.190286!10858-111G3;0.138169!10156-103A3;0.195495!11901-125F2;0.860002!11902-125F3;0.0163068!11903-125F4;0.00305249!10689-109F5;0.0155922!10648-109A9;0.0378141!10784-110H1;0.537684!10744-110C6;0.13761!10772-110F7;0.297203!10474-106I6;0.237146!10600-108E6;0.491741!10684-109E9;0.552371!12226-129F3;0.287148!12227-129F4;0.507463!10508-107D4;0.11597!10539-107G8;0.457531!10607-108F4;0.926668!10555-107I6;0.711513!10774-110F9;0.805606!10637-108I7;0.519737!10663-109C6;0.787143!10728-110A8;0.636656!10729-110A9;0.161094!10430-106D7;0.0558654!10730-110B1;0.163961!10813-111B3;0.451707!10812-111B2;0.0308473!10037-101F1;0.0620914!10172-103C1;0.788691!10163-103B1;0.828576!10076-102A4;0.991977!10073-102A1;0.973542!10036-101E9;0.922232!10195-103E6;0.999774!10277-104E7;0.739161!10434-106E2;0.360581!10550-107I1;0.378953!10545-107H5;0.053437!10544-107H4;0.476747!10704-109H2;0.899795!10510-107D6;0.147568!10558-107I9;0.0795176!10020-101D2;0.906991!10732-110B3;0.154495!10049-101G4;0.280363!10698-109G5;0.247572!10437-106E5;0.42618!10417-106C3;0.466371!10035-101E8;0.514082!10171-103B9;0.888666!10157-103A4;0.920246!10034-101E7;0.981497!10072-101I9;0.884822!10199-103F1;0.888389!10200-103F2;0.218108!10697-109G4;0.0209096!10723-110A3;0.693514!10179-103C8;0.148737!10160-103A7;0.782146!10180-103C9;0.906738!10162-103A9;0.465365!10021-101D3;0.572402!10840-111E3;0.0579001!10706-109H4;0.0873216!10033-101E6;0.831515!10032-101E5;0.711882!10490-107B4;0.860976!10439-106E7;0.147188!10022-101D4;0.100742!10176-103C5;0.107478!10469-106I1;0.870181!10067-101I4;0.112582!10411-106B6;0.197373!10471-106I3;0.311511!10030-101E3;0.0159884!10475-106I7;0.30803!10787-110H4;0.097443!10477-106I9;0.171781!10695-109G2;0.99533!11771-123I7;0.205596!11772-123I8;0.791657!11773-123I9;0.652306!10093-102C3;0.520162!10442-106F1;0.16933!10442-106F1;0.650509!10201-103F3;0.609872!10639-108I9;0.0426135!11843-124H7;0.148464!11841-124H5;0.012123!10693-109F9;0.0599467!10436-106E4;0.0178134!10483-107A6;0.774387!10282-104F3;0.986015!10023-101D5;0.0845849!10066-101I3;0.0986124!10065-101I2;0.071233!10800-110I8;0.00389647!10610-108F7;0.134848!10841-111E4;0.765088!10541-107H1;0.356167!10842-111E5;0.283386!10562-108A4;0.104571!10024-101D6;0.0616508!10064-101I1;0.0141596!10609-108F6;0.00173348!10048-101G3;0.125365!10781-110G7;0.0335827!10181-103D1;0.130709!10159-103A6;0.773883!10056-101H2;0.669298!10737-110B8;0.359474!10025-101D7;0.164123!10044-101F8;0.986644!10424-106D1;0.712898!10463-106H4;0.329921!10616-108G4;0.497737!10486-107A9;0.420053!10062-101H8;0.695826!10202-103F4;0.170658!10158-103A5;0.225636!10441-106E9;0.577386!10031-101E4;0.0251263!10063-101H9;0.833372!10063-101H9;0.993062!11763-123H8;0.00563526!11765-123I1;0.00159978!11768-123I4;0.024172!10807-111A6;0.00152064!10790-110H7;0.592855!10798-110I6;0.0722544!10786-110H3;0.476055!10591-108D6;0.0836783!10593-108D8;0.532978!10590-108D5;0.189828!10026-101D8;0.15633!10096-102C6;0.685259!10168-103B6;0.0892088!10154-103A1;0.809163!10209-103G2;0.731602!10061-101H7;0.0263942!10027-101D9;0.0127292!10043-101F7;0.010155!10783-110G9;0.145889!10028-101E1;0.808533!10060-101H6;0.265229!10203-103F5;0.0410018!10059-101H5;0.0161719!10047-101G2;0.0150924!10029-101E2;0.124221!10058-101H4;0.104231!10418-106C4;0.0242836!10492-107B6;0.178813!10694-109G1;0.0918903!10797-110I5;0.624907!10057-101H3;0.993408!10100-102D1;0.00503398!10055-101H1;0.17806!10204-103F6;0.123259!10191-103E2;0.489735!10563-108A5;0.232133
|name=CNhs11853_bu_f1
|name=CNhs11853_bu_f1
|tomtom_result=znf143#MA0088.1;2;0.00203359;0.967988;0.861502;11;GCCCCCAGCCC;GATTTCCCATAATGCCTTGC;+!ACE2#MA0267.1;-3;0.0027242;1.29672;0.861502;7;GCCCCCAGCCC;ACCAGCA;+!MZF1_5-13#MA0057.1;0;0.00372723;1.77416;0.861502;10;GCCCCCAGCCC;TTCCCCCTAC;-!INSM1#MA0155.1;1;0.00428731;2.04076;0.861502;11;GCCCCCAGCCC;CGCCCCCTGACA;-!Hand1::Tcfe2a#MA0092.1;-1;0.00452584;2.1543;0.861502;10;GCCCCCAGCCC;ATGCCAGACC;-!YY1#MA0095.1;-3;0.00675287;3.21437;0.890346;6;GCCCCCAGCCC;GCCATC;+!SP1#MA0079.2;-3;0.00701254;3.33797;0.890346;8;GCCCCCAGCCC;CCCCGCCCCC;+!Tcfcp2l1#MA0145.1;-4;0.00810151;3.85632;0.890346;7;GCCCCCAGCCC;CCAGTTCAAACCAG;+!MET31#MA0333.1;-2;0.00841927;4.00757;0.890346;9;GCCCCCAGCCC;CGCCACACT;-!Gata1#MA0035.1;-4;0.0102288;4.8689;0.928348;6;GCCCCCAGCCC;CCATCC;-!PHD1#MA0355.1;0;0.0133812;6.36943;0.928348;10;GCCCCCAGCCC;ACCTGCAGCA;+!Pax4#MA0068.1;19;0.0136914;6.51709;0.928348;11;GCCCCCAGCCC;GAAAAATTTCCCATACTCCACTCCCCCCCC;+!SP1#MA0079.2;-2;0.0149711;7.12623;0.928348;9;GCCCCCAGCCC;ACCCCGCCCC;-!YGR067C#MA0425.1;-1;0.015124;7.199;0.928348;10;GCCCCCAGCCC;ACCCCACTTTTTTG;+!Tal1::Gata1#MA0140.1;10;0.0166581;7.92926;0.928348;8;GCCCCCAGCCC;CTTATCTGTCCCCACCAG;-!ELK1#MA0028.1;-1;0.0176653;8.4087;0.928348;10;GCCCCCAGCCC;CTTCCGGCTC;-!Macho-1#MA0118.1;2;0.0180327;8.58356;0.928348;7;GCCCCCAGCCC;GAACCCCCA;-!Cebpa#MA0102.1;1;0.0182272;8.67616;0.928348;11;GCCCCCAGCCC;TTTCGCAATCTT;+!Mafb#MA0117.1;-1;0.0186055;8.85621;0.928348;8;GCCCCCAGCCC;GCGTCAGC;-!YPR022C#MA0436.1;-2;0.0197363;9.3945;0.928348;7;GCCCCCAGCCC;CCCCACG;+!MIG1#MA0337.1;-1;0.0209157;9.95586;0.928348;7;GCCCCCAGCCC;CCCCCGC;+
}}
}}

Latest revision as of 14:22, 7 September 2012

Full Name: CNhs11853_bu_f1

Motif matrix
POACGT
161.323244072311034315.9961992099769414.22256567669535276.31223136522647
26.839148671225296687.1171064903995227.88755841462566146.01042674795943
3135.11468781981532478.4736257004832448.31472535056734405.951201453344
40.6562114085580937518.4542823091747396.96746694683617151.7762796596407
50.215830016686263921067.20675027415150.215830016686263920.21583001668626392
60.01067.85424032421020.00.0
71067.85424032421020.00.00.0
814.26301553959866999.05600607387605579.5263662757696375.0088524349652
9167.20844347718648539.0858146294976156.69223735998642204.86774485753898
10113.82392695854955517.8356738817148224.95345955002398211.2411799339215
11180.7499548649529499.7910974579980383.62492938395636303.68825861730204

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
znf143#MA0088.120.002033590.9679880.86150211GCCCCCAGCCCGATTTCCCATAATGCCTTGC+
ACE2#MA0267.1-30.00272421.296720.8615027GCCCCCAGCCCACCAGCA+
MZF1_5-13#MA0057.100.003727231.774160.86150210GCCCCCAGCCCTTCCCCCTAC-
INSM1#MA0155.110.004287312.040760.86150211GCCCCCAGCCCCGCCCCCTGACA-
Hand1::Tcfe2a#MA0092.1-10.004525842.15430.86150210GCCCCCAGCCCATGCCAGACC-
YY1#MA0095.1-30.006752873.214370.8903466GCCCCCAGCCCGCCATC+
SP1#MA0079.2-30.007012543.337970.8903468GCCCCCAGCCCCCCCGCCCCC+
Tcfcp2l1#MA0145.1-40.008101513.856320.8903467GCCCCCAGCCCCCAGTTCAAACCAG+
MET31#MA0333.1-20.008419274.007570.8903469GCCCCCAGCCCCGCCACACT-
Gata1#MA0035.1-40.01022884.86890.9283486GCCCCCAGCCCCCATCC-
PHD1#MA0355.100.01338126.369430.92834810GCCCCCAGCCCACCTGCAGCA+
Pax4#MA0068.1190.01369146.517090.92834811GCCCCCAGCCCGAAAAATTTCCCATACTCCACTCCCCCCCC+
SP1#MA0079.2-20.01497117.126230.9283489GCCCCCAGCCCACCCCGCCCC-
YGR067C#MA0425.1-10.0151247.1990.92834810GCCCCCAGCCCACCCCACTTTTTTG+
Tal1::Gata1#MA0140.1100.01665817.929260.9283488GCCCCCAGCCCCTTATCTGTCCCCACCAG-
ELK1#MA0028.1-10.01766538.40870.92834810GCCCCCAGCCCCTTCCGGCTC-
Macho-1#MA0118.120.01803278.583560.9283487GCCCCCAGCCCGAACCCCCA-
Cebpa#MA0102.110.01822728.676160.92834811GCCCCCAGCCCTTTCGCAATCTT+
Mafb#MA0117.1-10.01860558.856210.9283488GCCCCCAGCCCGCGTCAGC-
YPR022C#MA0436.1-20.01973639.39450.9283487GCCCCCAGCCCCCCCACG+
MIG1#MA0337.1-10.02091579.955860.9283487GCCCCCAGCCCCCCCCGC+
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