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MacroAPE 1083:ZN219 f1: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;3.861386138613874;4.2904290429042895;13.214521452145206;4.633663366336628!2;11.584158415841596;0.8151815181518164;7.379537953795384;6.221122...")
 
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10455-106G5;0.58654!10534-107G3;0.835653!10429-106D6;0.908324!10464-106H5;0.515803!10827-111C8;0.772145!10789-110H6;0.667244!10828-111C9;0.494197!10788-110H5;0.987099!10792-110H9;0.70489!10765-110E9;0.571135!10829-111D1;0.878828!10830-111D2;0.706014!10831-111D3;0.858095!10832-111D4;0.685907!10833-111D5;0.902355!10764-110E8;0.834573!10770-110F5;0.758584!10399-106A3;0.796925!10400-106A4;0.832891!10405-106A9;0.444296!10834-111D6;0.794787!10835-111D7;0.815959!10836-111D8;0.174935!10837-111D9;0.469236!10699-109G6;0.552035!10802-111A1;0.717488!10796-110I4;0.479483!10010-101C1;0.792356!10810-111A9;0.761595!10421-106C7;0.547727!10708-109H6;0.106207!12235-129G3;0.993087!12236-129G4;0.507806!12237-129G5;0.77514!10167-103B5;0.593962!10151-102I7;0.435819!10428-106D5;0.366349!10795-110I3;0.399253!10805-111A4;0.497288!10052-101G7;0.912546!10189-103D9;0.735648!10589-108D4;0.57415!10425-106D2;0.13442!10427-106D4;0.542426!10702-109G9;0.757889!10432-106D9;0.164105!10496-107C1;0.354591!10718-109I7;0.775766!10011-101C2;0.92438!10053-101G8;0.754666!10686-109F2;0.457989!10084-102B3;0.00526974!10012-101C3;0.125227!10085-102B4;0.324607!10482-107A5;0.0891484!10419-106C5;0.836747!10080-102A8;0.236803!10760-110E4;0.346208!10709-109H7;0.100136!10710-109H8;0.36548!10703-109H1;0.0502158!10719-109I8;0.0997842!10642-109A3;0.411954!10177-103C6;0.196107!10164-103B2;0.829386!10173-103C2;0.578431!10166-103B4;0.342186!10083-102B2;0.351876!10188-103D8;0.151722!10552-107I3;0.22382!10553-107I4;0.184475!10013-101C4;0.79233!10536-107G5;0.679055!10618-108G6;0.558927!10423-106C9;0.318846!10785-110H2;0.451293!12238-129G6;0.149831!12239-129G7;0.689776!12240-129G8;0.989503!10416-106C2;0.564653!10801-110I9;0.696801!10766-110F1;0.291377!10824-111C5;0.883473!10825-111C6;0.544778!10826-111C7;0.655551!10454-106G4;0.520542!10409-106B4;0.481113!10638-108I8;0.121722!10636-108I6;0.584075!10513-107D9;0.568948!10420-106C6;0.395586!10082-102B1;0.993644!10014-101C5;0.20592!10070-101I7;0.498244!10452-106G2;0.196119!10453-106G3;0.748803!10449-106F8;0.817637!10042-101F6;0.872376!10069-101I6;0.364882!10193-103E4;0.466486!10631-108I1;0.537437!10438-106E6;0.719954!10488-107B2;0.49553!10196-103E7;0.822711!10071-101I8;0.196102!10071-101I8;0.0359019!10041-101F5;0.339488!10451-106G1;0.912449!10450-106F9;0.864944!10604-108F1;0.671882!10605-108F2;0.48275!10606-108F3;0.639081!10603-108E9;0.57477!10497-107C2;0.59297!10448-106F7;0.917688!10643-109A4;0.670275!10426-106D3;0.907985!10431-106D8;0.872305!10197-103E8;0.805038!10443-106F2;0.491582!10815-111B5;0.916246!10816-111B6;0.664273!10817-111B7;0.646061!10015-101C6;0.581498!10410-106B5;0.921402!10054-101G9;0.446603!10758-110E2;0.0914298!10711-109H9;0.198745!10040-101F4;0.628598!10470-106I2;0.420422!10415-106C1;0.164478!10198-103E9;0.441311!10614-108G2;0.196431!10612-108F9;0.0454996!10549-107H9;0.163298!10615-108G3;0.474935!10487-107B1;0.227244!10433-106E1;0.448944!10688-109F4;0.363413!10444-106F3;0.109042!10444-106F3;0.886866!10485-107A8;0.853525!10413-106B8;0.843005!10175-103C4;0.477039!10161-103A8;0.539633!12131-128D7;0.698906!10624-108H3;0.743675!10712-109I1;0.917191!10205-103F7;0.53685!10206-103F8;0.823937!10207-103F9;0.964208!10050-101G5;0.739552!10051-101G6;0.283297!10016-101C7;0.357491!10046-101G1;0.607504!10778-110G4;0.761785!10633-108I3;0.876676!10818-111B8;0.542495!10819-111B9;0.480122!10820-111C1;0.306632!10484-107A7;0.391608!10808-111A7;0.522234!10169-103B7;0.768057!10153-102I9;0.298107!13425-144D5;0.345938!13433-144E4;0.123911!13437-144E8;0.0863058!11904-125F5;0.125732!11905-125F6;0.0854167!10039-101F3;0.0930384!10791-110H8;0.369444!10017-101C8;0.605745!10045-101F9;0.561031!10509-107D5;0.177926!10839-111E2;0.186512!10692-109F8;0.104088!10079-102A7;0.408436!10078-102A6;0.214143!10721-110A1;0.268459!10569-108B2;0.782791!10570-108B3;0.879427!10571-108B4;0.787337!10647-109A8;0.838804!10752-110D5;0.50304!10782-110G8;0.880071!10726-110A6;0.277384!10018-101C9;0.140464!10086-102B5;0.641895!10182-103D2;0.449762!10165-103B3;0.195142!10499-107C4;0.258769!10408-106B3;0.911983!10019-101D1;0.938233!10068-101I5;0.861925!10075-102A3;0.962936!10077-102A5;0.3607!10727-110A7;0.593352!10775-110G1;0.238312!10412-106B7;0.433664!12231-129F8;0.600604!12232-129F9;0.823839!12233-129G1;0.854824!12234-129G2;0.70387!10414-106B9;0.867488!10170-103B8;0.427955!10183-103D3;0.514537!10150-102I6;0.312351!10174-103C3;0.388558!10155-103A2;0.309703!10038-101F2;0.39989!10838-111E1;0.246545!10759-110E3;0.683174!10514-107E1;0.194617!10465-106H6;0.825783!10691-109F7;0.132935!10843-111E6;0.775097!10844-111E7;0.417606!11747-123G1;0.269857!11748-123G2;0.75966!11749-123G3;0.913632!11750-123G4;0.464566!11751-123G5;0.510203!11840-124H4;0.709794!11752-123G6;0.651415!11753-123G7;0.837962!11754-123G8;0.572772!11755-123G9;0.730773!11756-123H1;0.478243!11833-124G6;0.277703!11760-123H5;0.449279!11836-124G9;0.87996!11758-123H3;0.738349!11835-124G8;0.268861!11762-123H7;0.958932!11838-124H2;0.339101!11757-123H2;0.789879!11759-123H4;0.0194285!11761-123H6;0.482503!11842-124H6;0.88353!11837-124H1;0.237461!10568-108B1;0.968498!13230-141I8;0.183279!13231-141I9;0.506718!10696-109G3;0.803129!10493-107B7;0.237008!10494-107B8;0.469691!10850-111F4;0.142593!10851-111F5;0.0760913!10852-111F6;0.0603452!10853-111F7;0.848863!10854-111F8;0.80767!10855-111F9;0.527716!10856-111G1;0.310897!10847-111F1;0.00166072!10846-111E9;0.895388!10848-111F2;0.0363909!10845-111E8;0.23424!10857-111G2;0.56!10858-111G3;0.0109213!10156-103A3;0.635772!11901-125F2;0.345755!11902-125F3;0.488037!11903-125F4;0.783876!10689-109F5;0.482803!10648-109A9;0.109641!10784-110H1;0.666703!10744-110C6;0.973763!10772-110F7;0.828667!10474-106I6;0.432393!10600-108E6;0.0164458!10684-109E9;0.534281!12226-129F3;0.717233!12227-129F4;0.727379!10508-107D4;0.951215!10539-107G8;0.426828!10607-108F4;0.593799!10555-107I6;0.412253!10774-110F9;0.585377!10637-108I7;0.0702174!10663-109C6;0.192268!10728-110A8;0.125369!10729-110A9;0.019722!10430-106D7;0.708842!10730-110B1;0.872328!10813-111B3;0.888067!10812-111B2;0.371452!10037-101F1;0.455081!10172-103C1;0.405802!10163-103B1;0.565373!10076-102A4;0.457708!10073-102A1;0.228031!10036-101E9;0.199146!10195-103E6;0.308412!10277-104E7;0.300816!10434-106E2;0.429335!10550-107I1;0.960005!10545-107H5;0.503127!10544-107H4;0.992231!10704-109H2;0.325067!10510-107D6;0.687263!10558-107I9;0.649353!10020-101D2;0.40632!10732-110B3;0.548143!10049-101G4;0.466267!10698-109G5;0.0559849!10437-106E5;0.937854!10417-106C3;0.917728!10035-101E8;0.697838!10171-103B9;0.380314!10157-103A4;0.384374!10034-101E7;0.436698!10072-101I9;0.30777!10199-103F1;0.273991!10200-103F2;0.799244!10697-109G4;0.801006!10723-110A3;0.460871!10179-103C8;0.374045!10160-103A7;0.111378!10180-103C9;0.334221!10162-103A9;0.747008!10021-101D3;0.608109!10840-111E3;0.860752!10706-109H4;0.87983!10033-101E6;0.652046!10032-101E5;0.370063!10490-107B4;0.26468!10439-106E7;0.657228!10022-101D4;0.84572!10176-103C5;0.570618!10469-106I1;0.566519!10067-101I4;0.364231!10411-106B6;0.054983!10471-106I3;0.48135!10030-101E3;0.396432!10475-106I7;0.213453!10787-110H4;0.305223!10477-106I9;0.829984!10695-109G2;0.439856!11771-123I7;0.105359!11772-123I8;0.665724!11773-123I9;0.578116!10093-102C3;0.978343!10442-106F1;0.94859!10442-106F1;0.396209!10201-103F3;0.358874!10639-108I9;0.215038!11843-124H7;0.852774!11841-124H5;0.95081!10693-109F9;0.894905!10436-106E4;0.486651!10483-107A6;0.932175!10282-104F3;0.53475!10023-101D5;0.50587!10066-101I3;0.740618!10065-101I2;0.560915!10800-110I8;0.457124!10610-108F7;0.624041!10841-111E4;0.238453!10541-107H1;0.499001!10842-111E5;0.746942!10562-108A4;0.273144!10024-101D6;0.31889!10064-101I1;0.27599!10609-108F6;0.0297055!10048-101G3;0.407853!10781-110G7;0.592502!10181-103D1;0.403555!10159-103A6;0.224125!10056-101H2;0.77718!10737-110B8;0.231109!10025-101D7;0.685871!10044-101F8;0.754461!10424-106D1;0.520276!10463-106H4;0.375235!10616-108G4;0.958854!10486-107A9;0.039476!10062-101H8;0.32561!10202-103F4;0.302691!10158-103A5;0.460588!10441-106E9;0.707708!10031-101E4;0.25955!10063-101H9;0.223801!10063-101H9;0.278847!11763-123H8;0.101478!11765-123I1;0.998834!11768-123I4;0.699512!10807-111A6;0.958526!10790-110H7;0.654274!10798-110I6;0.687005!10786-110H3;0.446477!10591-108D6;0.106852!10593-108D8;0.0394943!10590-108D5;0.240894!10026-101D8;0.196274!10096-102C6;0.319042!10168-103B6;0.227552!10154-103A1;0.566983!10209-103G2;0.65653!10061-101H7;0.855835!10027-101D9;0.394906!10043-101F7;0.784811!10783-110G9;0.444929!10028-101E1;0.518284!10060-101H6;0.494311!10203-103F5;0.102798!10059-101H5;0.890945!10047-101G2;0.693622!10029-101E2;0.88357!10058-101H4;0.933676!10418-106C4;0.523409!10492-107B6;0.0740053!10694-109G1;0.895217!10797-110I5;0.511657!10057-101H3;0.997051!10100-102D1;0.28958!10055-101H1;0.94226!10204-103F6;0.256032!10191-103E2;0.819271!10563-108A5;0.559237
|name=ZN219_f1
|name=ZN219_f1
|tomtom_result=btd#MA0443.1;-2;1.31235e-05;0.00624681;0.0122842;10;GAGGGGGGCGGA;AGGGGGCGGA;+!RREB1#MA0073.1;2;0.000132168;0.0629122;0.0618575;12;GAGGGGGGCGGA;TGGGGGGGGGTGGTTTGGGG;-!SP1#MA0079.2;-2;0.000332983;0.1585;0.103895;10;GAGGGGGGCGGA;GGGGCGGGGT;+!SP1#MA0079.2;-3;0.000631625;0.300654;0.123282;9;GAGGGGGGCGGA;GGGGGCGGGG;-!Macho-1#MA0118.1;-1;0.00065853;0.31346;0.123282;9;GAGGGGGGCGGA;TGGGGGGTC;+!YML081W#MA0431.1;0;0.000936283;0.445671;0.146066;9;GAGGGGGGCGGA;GTGCGGGGT;-!MIG2#MA0338.1;-1;0.00124179;0.59109;0.158738;7;GAGGGGGGCGGA;TGCGGGG;-!Pax4#MA0068.1;2;0.00142843;0.679934;0.158738;12;GAGGGGGGCGGA;GGGGGGGGAGTGGAGTATTGGAAATTTTTC;-!AFT2#MA0270.1;-2;0.00152626;0.726502;0.158738;8;GAGGGGGGCGGA;GGGGTGTG;-!MSN2#MA0341.1;-3;0.00213203;1.01485;0.199567;5;GAGGGGGGCGGA;AGGGG;+!MIG3#MA0339.1;-1;0.00309304;1.47228;0.229083;7;GAGGGGGGCGGA;TGCGGGG;-!Klf4#MA0039.2;-2;0.00314426;1.49667;0.229083;10;GAGGGGGGCGGA;TGGGTGGGGC;+!Egr1#MA0162.1;0;0.00318157;1.51443;0.229083;11;GAGGGGGGCGGA;TGCGTGGGCGT;+!ADR1#MA0268.1;-2;0.0039793;1.89415;0.248319;7;GAGGGGGGCGGA;GTGGGGT;-!MIG1#MA0337.1;-2;0.0039793;1.89415;0.248319;7;GAGGGGGGCGGA;GCGGGGG;-!opa#MA0456.1;2;0.00436052;2.07561;0.255102;10;GAGGGGGGCGGA;CAGCGGGGGGTC;-!YPR022C#MA0436.1;-1;0.00507494;2.41567;0.272248;7;GAGGGGGGCGGA;CGTGGGG;-!MSN4#MA0342.1;-1;0.00523531;2.49201;0.272248;5;GAGGGGGGCGGA;AGGGG;+!RPN4#MA0373.1;-3;0.00571823;2.72188;0.277532;7;GAGGGGGGCGGA;GGTGGCG;+!abi4#MA0123.1;0;0.00592991;2.82264;0.277532;10;GAGGGGGGCGGA;GGGGGCACCG;-!hkb#MA0450.1;-2;0.00682256;3.24754;0.304105;9;GAGGGGGGCGGA;GGGGCGTGA;+!RGM1#MA0366.1;-1;0.00810177;3.85644;0.344709;5;GAGGGGGGCGGA;AGGGG;+!YGR067C#MA0425.1;5;0.00915039;4.35559;0.372397;9;GAGGGGGGCGGA;TGAAAAAGTGGGGT;-!ZMS1#MA0441.1;-1;0.0100558;4.78658;0.392195;9;GAGGGGGGCGGA;TGCGGGGAA;-!Tal1::Gata1#MA0140.1;0;0.0110257;5.24824;0.412821;12;GAGGGGGGCGGA;CTGGTGGGGACAGATAAG;+!CRZ1#MA0285.1;-2;0.0127256;6.05739;0.430099;9;GAGGGGGGCGGA;GTGGCTTAG;-!CTCF#MA0139.1;6;0.012817;6.10089;0.430099;12;GAGGGGGGCGGA;TGGCCACCAGGGGGCGCTA;+!AFT1#MA0269.1;1;0.0128657;6.12405;0.430099;12;GAGGGGGGCGGA;CCAATCGGGTGCAATATGTAA;-!MZF1_5-13#MA0057.1;1;0.0135961;6.47174;0.438845;9;GAGGGGGGCGGA;GGAGGGGGAA;+!MZF1_1-4#MA0056.1;-2;0.0149811;7.13102;0.467432;6;GAGGGGGGCGGA;TGGGGA;+!INSM1#MA0155.1;2;0.0195814;9.32073;0.591256;10;GAGGGGGGCGGA;TGTCAGGGGGCG;+!MET31#MA0333.1;-1;0.0209631;9.97844;0.613198;9;GAGGGGGGCGGA;GGTGTGGCG;+
}}
}}

Latest revision as of 14:28, 7 September 2012

Full Name: ZN219_f1

Motif matrix
POACGT
13.8613861386138744.290429042904289513.2145214521452064.633663366336628
211.5841584158415960.81518151815181647.3795379537953846.221122112211214
30.77227722772277230.3861386138613873722.910891089108931.9306930693069317
40.02.316831683168316722.910891089108930.7722772277227723
50.00.3861386138613873720.594059405940595.019801980198018
60.4290429042904290.772277227722772324.026402640264050.7722772277227723
70.00.3861386138613873725.2277227722772470.38613861386138737
80.386138613861387370.025.6138613861386370.0
90.815181518151816411.2409240924092323.904290429042900410.039603960396036
101.15841584158415974.63366336633662819.4356435643564470.7722772277227723
110.01.158415841584159723.6831683168316861.1584158415841597
1214.8556105610560963.2285478547854741.64108910891089086.2747524752475154

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
btd#MA0443.1-21.31235e-050.006246810.012284210GAGGGGGGCGGAAGGGGGCGGA+
RREB1#MA0073.120.0001321680.06291220.061857512GAGGGGGGCGGATGGGGGGGGGTGGTTTGGGG-
SP1#MA0079.2-20.0003329830.15850.10389510GAGGGGGGCGGAGGGGCGGGGT+
SP1#MA0079.2-30.0006316250.3006540.1232829GAGGGGGGCGGAGGGGGCGGGG-
Macho-1#MA0118.1-10.000658530.313460.1232829GAGGGGGGCGGATGGGGGGTC+
YML081W#MA0431.100.0009362830.4456710.1460669GAGGGGGGCGGAGTGCGGGGT-
MIG2#MA0338.1-10.001241790.591090.1587387GAGGGGGGCGGATGCGGGG-
Pax4#MA0068.120.001428430.6799340.15873812GAGGGGGGCGGAGGGGGGGGAGTGGAGTATTGGAAATTTTTC-
AFT2#MA0270.1-20.001526260.7265020.1587388GAGGGGGGCGGAGGGGTGTG-
MSN2#MA0341.1-30.002132031.014850.1995675GAGGGGGGCGGAAGGGG+
MIG3#MA0339.1-10.003093041.472280.2290837GAGGGGGGCGGATGCGGGG-
Klf4#MA0039.2-20.003144261.496670.22908310GAGGGGGGCGGATGGGTGGGGC+
Egr1#MA0162.100.003181571.514430.22908311GAGGGGGGCGGATGCGTGGGCGT+
ADR1#MA0268.1-20.00397931.894150.2483197GAGGGGGGCGGAGTGGGGT-
MIG1#MA0337.1-20.00397931.894150.2483197GAGGGGGGCGGAGCGGGGG-
opa#MA0456.120.004360522.075610.25510210GAGGGGGGCGGACAGCGGGGGGTC-
YPR022C#MA0436.1-10.005074942.415670.2722487GAGGGGGGCGGACGTGGGG-
MSN4#MA0342.1-10.005235312.492010.2722485GAGGGGGGCGGAAGGGG+
RPN4#MA0373.1-30.005718232.721880.2775327GAGGGGGGCGGAGGTGGCG+
abi4#MA0123.100.005929912.822640.27753210GAGGGGGGCGGAGGGGGCACCG-
hkb#MA0450.1-20.006822563.247540.3041059GAGGGGGGCGGAGGGGCGTGA+
RGM1#MA0366.1-10.008101773.856440.3447095GAGGGGGGCGGAAGGGG+
YGR067C#MA0425.150.009150394.355590.3723979GAGGGGGGCGGATGAAAAAGTGGGGT-
ZMS1#MA0441.1-10.01005584.786580.3921959GAGGGGGGCGGATGCGGGGAA-
Tal1::Gata1#MA0140.100.01102575.248240.41282112GAGGGGGGCGGACTGGTGGGGACAGATAAG+
CRZ1#MA0285.1-20.01272566.057390.4300999GAGGGGGGCGGAGTGGCTTAG-
CTCF#MA0139.160.0128176.100890.43009912GAGGGGGGCGGATGGCCACCAGGGGGCGCTA+
AFT1#MA0269.110.01286576.124050.43009912GAGGGGGGCGGACCAATCGGGTGCAATATGTAA-
MZF1_5-13#MA0057.110.01359616.471740.4388459GAGGGGGGCGGAGGAGGGGGAA+
MZF1_1-4#MA0056.1-20.01498117.131020.4674326GAGGGGGGCGGATGGGGA+
INSM1#MA0155.120.01958149.320730.59125610GAGGGGGGCGGATGTCAGGGGGCG+
MET31#MA0333.1-10.02096319.978440.6131989GAGGGGGGCGGAGGTGTGGCG+
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