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MacroAPE 1083:6-TTAHWHCG: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;0.764;7.64;265.872;489.724!2;166.552;160.44;0.764;436.244!3;438.536;78.692;228.436;18.336!4;197.876;166.552;120.712;278.096!5;280.388;176.48...")
 
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0789-110H6;0.500782!10828-111C9;0.0442991!10788-110H5;0.0521378!10792-110H9;0.198603!10765-110E9;0.0366434!10829-111D1;0.0521993!10830-111D2;0.179532!10831-111D3;0.14371!10832-111D4;0.144039!10833-111D5;0.0695198!10764-110E8;0.0659709!10770-110F5;0.114152!10399-106A3;0.0731469!10400-106A4;0.0246309!10405-106A9;0.0319164!10834-111D6;0.020605!10835-111D7;0.0507727!10836-111D8;0.364821!10837-111D9;0.206464!10699-109G6;0.209295!10802-111A1;0.283178!10796-110I4;0.110727!10010-101C1;0.34944!10810-111A9;0.103062!10421-106C7;0.0547845!10708-109H6;0.0397366!12235-129G3;0.0041723!12236-129G4;0.95596!12237-129G5;0.936307!10167-103B5;0.817226!10151-102I7;0.168033!10428-106D5;0.166798!10795-110I3;0.0731718!10805-111A4;0.1439!10052-101G7;0.125161!10189-103D9;0.0856519!10589-108D4;0.409803!10425-106D2;0.722354!10427-106D4;0.366102!10702-109G9;0.0977435!10432-106D9;0.290566!10496-107C1;0.197197!10718-109I7;0.325034!10011-101C2;0.0238123!10053-101G8;0.124139!10686-109F2;0.774454!10084-102B3;0.209096!10012-101C3;0.436682!10085-102B4;0.134855!10482-107A5;0.413274!10419-106C5;0.0420949!10080-102A8;0.24431!10760-110E4;0.782809!10709-109H7;0.0813056!10710-109H8;0.3876!10703-109H1;0.01846!10719-109I8;0.162835!10642-109A3;0.114268!10177-103C6;0.349312!10164-103B2;0.108725!10173-103C2;0.128162!10166-103B4;0.206094!10083-102B2;0.170239!10188-103D8;0.364105!10552-107I3;0.116031!10553-107I4;0.174236!10013-101C4;0.660115!10536-107G5;0.162226!10618-108G6;0.532838!10423-106C9;0.0523983!10785-110H2;0.0284346!12238-129G6;0.0160774!12239-129G7;0.137953!12240-129G8;0.331151!10416-106C2;0.224834!10801-110I9;0.438661!10766-110F1;0.164481!10824-111C5;0.0540368!10825-111C6;0.256275!10826-111C7;0.270124!10454-106G4;0.273413!10409-106B4;0.101084!10638-108I8;0.0826325!10636-108I6;0.0951006!10513-107D9;0.0609959!10420-106C6;0.116258!10082-102B1;0.258669!10014-101C5;0.612056!10070-101I7;0.566407!10452-106G2;0.311495!10453-106G3;0.3177!10449-106F8;0.197558!10042-101F6;0.148528!10069-101I6;0.261327!10193-103E4;0.0259922!10631-108I1;0.167852!10438-106E6;0.234534!10488-107B2;0.322713!10196-103E7;0.34925!10071-101I8;0.28669!10071-101I8;0.168175!10041-101F5;0.227524!10451-106G1;0.071107!10450-106F9;0.0285758!10604-108F1;0.0213508!10605-108F2;0.083247!10606-108F3;0.0502489!10603-108E9;0.0385676!10497-107C2;0.0948286!10448-106F7;0.0850353!10643-109A4;0.217424!10426-106D3;0.0581796!10431-106D8;0.18324!10197-103E8;0.0527498!10443-106F2;0.254673!10815-111B5;0.0913644!10816-111B6;0.0600463!10817-111B7;0.0886237!10015-101C6;0.0561248!10410-106B5;0.277718!10054-101G9;0.86432!10758-110E2;0.0605446!10711-109H9;0.02218!10040-101F4;0.00948405!10470-106I2;0.131012!10415-106C1;0.00171856!10198-103E9;0.222249!10614-108G2;0.317348!10612-108F9;0.217308!10549-107H9;0.131463!10615-108G3;0.326875!10487-107B1;0.28354!10433-106E1;0.207502!10688-109F4;0.538992!10444-106F3;0.0863147!10444-106F3;0.0262084!10485-107A8;0.0549757!10413-106B8;0.208999!10175-103C4;0.268232!10161-103A8;0.212044!12131-128D7;0.166122!10624-108H3;0.356611!10712-109I1;0.575762!10205-103F7;0.484678!10206-103F8;0.0408006!10207-103F9;0.109478!10050-101G5;0.127158!10051-101G6;0.482952!10016-101C7;0.195397!10046-101G1;0.25613!10778-110G4;0.0666117!10633-108I3;0.276434!10818-111B8;0.116244!10819-111B9;0.140931!10820-111C1;0.135796!10484-107A7;0.149692!10808-111A7;0.0676442!10169-103B7;0.27867!10153-102I9;0.191801!13425-144D5;0.133277!13433-144E4;0.165878!13437-144E8;0.253188!11904-125F5;0.359771!11905-125F6;0.590615!10039-101F3;0.377925!10791-110H8;0.151811!10017-101C8;0.0429652!10045-101F9;0.592661!10509-107D5;0.39858!10839-111E2;0.848871!10692-109F8;0.810642!10079-102A7;0.222435!10078-102A6;0.149162!10721-110A1;0.229031!10569-108B2;0.215056!10570-108B3;0.247001!10571-108B4;0.219956!10647-109A8;0.335324!10752-110D5;0.0299217!10782-110G8;0.0898813!10726-110A6;0.491457!10018-101C9;0.0493622!10086-102B5;0.997177!10182-103D2;0.439572!10165-103B3;0.156522!10499-107C4;0.135394!10408-106B3;0.0578918!10019-101D1;0.183079!10068-101I5;0.162293!10075-102A3;0.0396128!10077-102A5;0.251687!10727-110A7;0.565905!10775-110G1;0.137613!10412-106B7;0.0499612!12231-129F8;0.877325!12232-129F9;0.536311!12233-129G1;0.831858!12234-129G2;0.934582!10414-106B9;0.916227!10170-103B8;0.0656757!10183-103D3;0.155472!10150-102I6;0.0981702!10174-103C3;0.128293!10155-103A2;0.128685!10038-101F2;0.124921!10838-111E1;0.106267!10759-110E3;0.260862!10514-107E1;0.0727508!10465-106H6;7.79541e-05!10691-109F7;0.0651417!10843-111E6;0.149166!10844-111E7;0.379934!11747-123G1;0.58596!11748-123G2;0.56265!11749-123G3;0.106486!11750-123G4;0.297873!11751-123G5;0.115404!11840-124H4;0.196451!11752-123G6;0.0862709!11753-123G7;0.14994!11754-123G8;0.172027!11755-123G9;0.218267!11756-123H1;0.529698!11833-124G6;0.159077!11760-123H5;0.0997078!11836-124G9;0.353661!11758-123H3;0.0709886!11835-124G8;0.0923716!11762-123H7;0.0358483!11838-124H2;0.60788!11757-123H2;0.438738!11759-123H4;0.134387!11761-123H6;0.0734864!11842-124H6;0.224741!11837-124H1;0.0851314!10568-108B1;0.0679083!13230-141I8;0.542741!13231-141I9;0.376727!10696-109G3;0.294398!10493-107B7;0.742878!10494-107B8;0.105279!10850-111F4;0.010068!10851-111F5;0.354901!10852-111F6;0.114364!10853-111F7;0.113258!10854-111F8;0.143891!10855-111F9;0.623797!10856-111G1;0.0161475!10847-111F1;0.0217599!10846-111E9;0.0676315!10848-111F2;0.0258773!10845-111E8;0.0644497!10857-111G2;0.0195635!10858-111G3;0.00964711!10156-103A3;0.146137!11901-125F2;0.144437!11902-125F3;0.854144!11903-125F4;0.561452!10689-109F5;0.569721!10648-109A9;0.0683928!10784-110H1;0.247008!10744-110C6;0.0582562!10772-110F7;0.609372!10474-106I6;0.0246963!10600-108E6;0.373973!10684-109E9;0.181463!12226-129F3;0.374263!12227-129F4;0.416472!10508-107D4;0.0233735!10539-107G8;0.877126!10607-108F4;0.980451!10555-107I6;0.236735!10774-110F9;0.802062!10637-108I7;0.0496741!10663-109C6;0.218705!10728-110A8;0.825643!10729-110A9;0.00842183!10430-106D7;0.414493!10730-110B1;0.0966933!10813-111B3;0.734659!10812-111B2;0.229072!10037-101F1;0.523575!10172-103C1;0.116221!10163-103B1;0.14944!10076-102A4;0.191005!10073-102A1;0.215715!10036-101E9;0.29724!10195-103E6;0.248405!10277-104E7;0.157754!10434-106E2;0.52803!10550-107I1;0.298369!10545-107H5;0.364738!10544-107H4;0.373755!10704-109H2;0.251587!10510-107D6;0.770212!10558-107I9;0.0380993!10020-101D2;0.441167!10732-110B3;0.225893!10049-101G4;0.393837!10698-109G5;0.627723!10437-106E5;0.0861686!10417-106C3;0.613018!10035-101E8;0.115001!10171-103B9;0.149684!10157-103A4;0.122908!10034-101E7;0.123489!10072-101I9;0.148657!10199-103F1;0.278085!10200-103F2;0.599422!10697-109G4;0.02735!10723-110A3;0.460009!10179-103C8;0.22045!10160-103A7;0.132112!10180-103C9;0.109073!10162-103A9;0.034752!10021-101D3;0.114391!10840-111E3;0.100072!10706-109H4;0.0419108!10033-101E6;0.765099!10032-101E5;0.104778!10490-107B4;0.166208!10439-106E7;0.0470759!10022-101D4;0.0835218!10176-103C5;0.187585!10469-106I1;0.117857!10067-101I4;0.122275!10411-106B6;0.305671!10471-106I3;0.00181537!10030-101E3;0.134138!10475-106I7;0.348612!10787-110H4;0.0583588!10477-106I9;0.131691!10695-109G2;0.210338!11771-123I7;0.313143!11772-123I8;0.649237!11773-123I9;0.196247!10093-102C3;0.245694!10442-106F1;0.921178!10442-106F1;0.949906!10201-103F3;0.993904!10639-108I9;0.112946!11843-124H7;0.562045!11841-124H5;0.191751!10693-109F9;0.385858!10436-106E4;0.565932!10483-107A6;0.0339484!10282-104F3;0.205313!10023-101D5;0.0305046!10066-101I3;0.0263549!10065-101I2;0.0183352!10800-110I8;0.0602321!10610-108F7;0.0709617!10841-111E4;0.92124!10541-107H1;0.109339!10842-111E5;0.231399!10562-108A4;0.557032!10024-101D6;0.846783!10064-101I1;0.507129!10609-108F6;0.42899!10048-101G3;0.692995!10781-110G7;0.201213!10181-103D1;0.571283!10159-103A6;0.128426!10056-101H2;0.197294!10737-110B8;0.0409356!10025-101D7;0.470335!10044-101F8;0.979114!10424-106D1;0.542509!10463-106H4;0.0369552!10616-108G4;0.122799!10486-107A9;0.956777!10062-101H8;0.602554!10202-103F4;0.479355!10158-103A5;0.307466!10441-106E9;0.166023!10031-101E4;0.0454181!10063-101H9;0.168516!10063-101H9;0.340021!11763-123H8;0.11722!11765-123I1;0.170253!11768-123I4;0.306401!10807-111A6;0.230344!10790-110H7;0.0379829!10798-110I6;0.0588346!10786-110H3;0.0539729!10591-108D6;0.0744056!10593-108D8;0.248504!10590-108D5;0.201202!10026-101D8;0.05053!10096-102C6;0.376386!10168-103B6;0.926925!10154-103A1;0.100882!10209-103G2;0.182532!10061-101H7;0.0915799!10027-101D9;0.110759!10043-101F7;0.816624!10783-110G9;0.221358!10028-101E1;0.96719!10060-101H6;0.443116!10203-103F5;0.24775!10059-101H5;0.128374!10047-101G2;0.0594621!10029-101E2;0.405763!10058-101H4;0.163257!10418-106C4;0.0655757!10492-107B6;0.344093!10694-109G1;0.11965!10797-110I5;0.899815!10057-101H3;0.67089!10100-102D1;0.102759!10055-101H1;0.149287!10204-103F6;0.161881!10191-103E2;0.259385!10563-108A5;0.0691545
|name=6-TTAHWHCG,CNhs13839,BestGuess:MECP2_f1_HM09(0.568552612586721),T:764.0(26.57%),B:7987.8(17.68%),P:1e-31
|name=6-TTAHWHCG,CNhs13839,BestGuess:MECP2_f1_HM09(0.568552612586721),T:764.0(26.57%),B:7987.8(17.68%),P:1e-31
|tomtom_result=STB5#MA0392.1;0;0.00303526;1.44479;1;8;TTATTTCG;TAACACCG;-!RGT1#MA0367.1;2;0.00652478;3.10579;1;8;TTATTTCG;AATTTTTCCGG;+!YPR196W#MA0437.1;1;0.0086984;4.14044;1;8;TTATTTCG;ATTTCTCCG;+!mab-3#MA0262.1;-2;0.0102759;4.89132;1;6;TTATTTCG;AATTCGCAACATT;-!SUT2#MA0400.1;1;0.0105921;5.04184;1;8;TTATTTCG;AAATTTTCGGAGTTTATCAT;-!GSM1#MA0308.1;1;0.0113883;5.42085;1;8;TTATTTCG;TATACTCCGGAGTTTTTTAAT;-!ABF1#MA0265.1;7;0.0129833;6.18006;1;8;TTATTTCG;ATATCACTTTATACGA;-!YPR015C#MA0435.1;0;0.0158688;7.55357;1;8;TTATTTCG;TGAAGACGTAAATCCTTACA;+!YRR1#MA0439.1;1;0.0178202;8.4824;1;8;TTATTTCG;CTTATCTCCGC;+!EDS1#MA0294.1;1;0.0196049;9.33194;1;8;TTATTTCG;ATTTTTCCG;-!YJL103C#MA0427.1;-1;0.0203418;9.68268;1;7;TTATTTCG;AGCTCCGGAGA;+
}}
}}

Latest revision as of 14:31, 7 September 2012

Full Name: 6-TTAHWHCG,CNhs13839,BestGuess:MECP2_f1_HM09(0.568552612586721),T:764.0(26.57%),B:7987.8(17.68%),P:1e-31

Motif matrix
POACGT
10.7647.64265.872489.724
2166.552160.440.764436.244
3438.53678.692228.43618.336
4197.876166.552120.712278.096
5280.388176.4840.764306.364
6203.224233.78463.412262.816
70.764761.7080.7640.764
80.7640.764761.7080.764

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
STB5#MA0392.100.003035261.4447918TTATTTCGTAACACCG-
RGT1#MA0367.120.006524783.1057918TTATTTCGAATTTTTCCGG+
YPR196W#MA0437.110.00869844.1404418TTATTTCGATTTCTCCG+
mab-3#MA0262.1-20.01027594.8913216TTATTTCGAATTCGCAACATT-
SUT2#MA0400.110.01059215.0418418TTATTTCGAAATTTTCGGAGTTTATCAT-
GSM1#MA0308.110.01138835.4208518TTATTTCGTATACTCCGGAGTTTTTTAAT-
ABF1#MA0265.170.01298336.1800618TTATTTCGATATCACTTTATACGA-
YPR015C#MA0435.100.01586887.5535718TTATTTCGTGAAGACGTAAATCCTTACA+
YRR1#MA0439.110.01782028.482418TTATTTCGCTTATCTCCGC+
EDS1#MA0294.110.01960499.3319418TTATTTCGATTTTTCCG-
YJL103C#MA0427.1-10.02034189.6826817TTATTTCGAGCTCCGGAGA+
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