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MacroAPE 1083:Motif TGTNAC: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;0;9088!02;0;0;9088;0!03;0;0;0;9088!04;2272;2272;2272;2272!05;9088;0;0;0!06;0;9088;0;0 |macroape_1083_sample_pvalues=11376-118A8;0.0199...")
 
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6B1;0.131699!12179-129A1;0.142341!12180-129A2;0.0102215!12181-129A3;0.0135044!12176-128I7;0.00732296!12177-128I8;0.0153571!12182-129A4;0.00413631!12183-129A5;0.0055936!12184-129A6;0.00425381!10809-111A8;0.0116213!10597-108E3;0.00240836!10717-109I6;0.140563!10455-106G5;0.214574!10534-107G3;0.711517!10429-106D6;0.313545!10464-106H5;0.771578!10827-111C8;0.147539!10789-110H6;0.382341!10828-111C9;0.636369!10788-110H5;0.225834!10792-110H9;0.333381!10765-110E9;0.899532!10829-111D1;0.612406!10830-111D2;0.579607!10831-111D3;0.763949!10832-111D4;0.776436!10833-111D5;0.804809!10764-110E8;0.416168!10770-110F5;0.589056!10399-106A3;0.94754!10400-106A4;0.577379!10405-106A9;0.606388!10834-111D6;0.873764!10835-111D7;0.712789!10836-111D8;0.768742!10837-111D9;0.571959!10699-109G6;0.314809!10802-111A1;0.784218!10796-110I4;0.971043!10010-101C1;0.122583!10810-111A9;0.363858!10421-106C7;0.00119873!10708-109H6;0.351788!12235-129G3;0.026027!12236-129G4;0.430042!12237-129G5;0.0102831!10167-103B5;0.184855!10151-102I7;0.76699!10428-106D5;0.785616!10795-110I3;0.818113!10805-111A4;0.722992!10052-101G7;0.0699744!10189-103D9;0.482813!10589-108D4;0.314662!10425-106D2;0.0938372!10427-106D4;0.00241656!10702-109G9;0.0143461!10432-106D9;0.793142!10496-107C1;0.271869!10718-109I7;0.942433!10011-101C2;0.815039!10053-101G8;0.642488!10686-109F2;0.00552731!10084-102B3;0.121603!10012-101C3;0.733271!10085-102B4;0.825639!10482-107A5;0.694329!10419-106C5;0.35756!10080-102A8;0.422779!10760-110E4;0.587534!10709-109H7;0.0614501!10710-109H8;0.445887!10703-109H1;0.0183523!10719-109I8;0.675061!10642-109A3;0.329534!10177-103C6;0.335785!10164-103B2;0.971639!10173-103C2;0.974667!10166-103B4;0.364325!10083-102B2;0.6856!10188-103D8;0.588536!10552-107I3;0.879376!10553-107I4;0.516595!10013-101C4;0.707047!10536-107G5;0.689799!10618-108G6;0.101734!10423-106C9;0.120845!10785-110H2;0.111253!12238-129G6;0.185375!12239-129G7;0.793139!12240-129G8;0.0827806!10416-106C2;0.605546!10801-110I9;0.581596!10766-110F1;0.65632!10824-111C5;0.697455!10825-111C6;0.134108!10826-111C7;0.157248!10454-106G4;0.225!10409-106B4;0.0638115!10638-108I8;0.976059!10636-108I6;0.564153!10513-107D9;0.707653!10420-106C6;0.078246!10082-102B1;0.690913!10014-101C5;0.432997!10070-101I7;0.988114!10452-106G2;0.93801!10453-106G3;0.44545!10449-106F8;0.967344!10042-101F6;0.853006!10069-101I6;0.721844!10193-103E4;0.423426!10631-108I1;0.940162!10438-106E6;0.470032!10488-107B2;0.319896!10196-103E7;0.20739!10071-101I8;0.484166!10071-101I8;0.783684!10041-101F5;0.989535!10451-106G1;0.441698!10450-106F9;0.850263!10604-108F1;0.217375!10605-108F2;0.222072!10606-108F3;0.0256972!10603-108E9;0.15336!10497-107C2;0.0626123!10448-106F7;0.390043!10643-109A4;0.00895766!10426-106D3;0.420153!10431-106D8;0.383559!10197-103E8;0.211694!10443-106F2;0.551206!10815-111B5;0.00767139!10816-111B6;0.108455!10817-111B7;0.521313!10015-101C6;0.151393!10410-106B5;0.951734!10054-101G9;0.395228!10758-110E2;0.990166!10711-109H9;0.0133536!10040-101F4;0.0401729!10470-106I2;0.838683!10415-106C1;0.222554!10198-103E9;0.0908015!10614-108G2;0.338747!10612-108F9;0.157361!10549-107H9;0.698964!10615-108G3;0.124065!10487-107B1;0.76103!10433-106E1;0.84701!10688-109F4;0.564126!10444-106F3;0.572136!10444-106F3;2.72335e-05!10485-107A8;4.0725e-06!10413-106B8;0.0588869!10175-103C4;0.0267685!10161-103A8;0.597729!12131-128D7;0.561087!10624-108H3;0.0564032!10712-109I1;0.534299!10205-103F7;0.266464!10206-103F8;0.157023!10207-103F9;0.326296!10050-101G5;0.0228381!10051-101G6;0.225859!10016-101C7;0.119653!10046-101G1;0.0807294!10778-110G4;0.148679!10633-108I3;0.858052!10818-111B8;0.505911!10819-111B9;0.139203!10820-111C1;0.15073!10484-107A7;0.14209!10808-111A7;0.606737!10169-103B7;0.668824!10153-102I9;0.740835!13425-144D5;0.854006!13433-144E4;0.151479!13437-144E8;0.0804255!11904-125F5;0.0688822!11905-125F6;0.000104392!10039-101F3;0.000535108!10791-110H8;0.761388!10017-101C8;0.200988!10045-101F9;0.713636!10509-107D5;0.440503!10839-111E2;0.813762!10692-109F8;0.364056!10079-102A7;0.146276!10078-102A6;0.135206!10721-110A1;0.108648!10569-108B2;0.00549358!10570-108B3;0.591131!10571-108B4;0.675279!10647-109A8;0.507956!10752-110D5;0.03734!10782-110G8;0.539005!10726-110A6;0.0310507!10018-101C9;0.0407756!10086-102B5;0.46827!10182-103D2;0.710286!10165-103B3;0.66992!10499-107C4;0.984598!10408-106B3;0.462599!10019-101D1;0.0437568!10068-101I5;0.0468022!10075-102A3;0.250993!10077-102A5;0.0703523!10727-110A7;0.0340119!10775-110G1;0.565954!10412-106B7;0.438922!12231-129F8;0.414746!12232-129F9;0.13331!12233-129G1;0.180358!12234-129G2;0.198215!10414-106B9;0.181961!10170-103B8;0.57021!10183-103D3;0.844678!10150-102I6;0.848744!10174-103C3;0.697049!10155-103A2;0.950699!10038-101F2;0.919489!10838-111E1;0.780827!10759-110E3;0.662432!10514-107E1;0.15401!10465-106H6;0.779598!10691-109F7;0.353307!10843-111E6;0.128127!10844-111E7;0.614298!11747-123G1;0.68789!11748-123G2;0.170817!11749-123G3;0.638106!11750-123G4;0.46087!11751-123G5;0.400258!11840-124H4;0.449132!11752-123G6;0.811973!11753-123G7;0.671055!11754-123G8;0.574958!11755-123G9;0.745934!11756-123H1;0.396419!11833-124G6;0.357828!11760-123H5;0.82597!11836-124G9;0.104768!11758-123H3;0.71034!11835-124G8;0.476408!11762-123H7;0.862686!11838-124H2;0.332369!11757-123H2;0.677544!11759-123H4;0.13634!11761-123H6;0.909222!11842-124H6;0.701996!11837-124H1;0.37349!10568-108B1;0.881676!13230-141I8;0.198579!13231-141I9;0.342703!10696-109G3;0.280511!10493-107B7;0.871242!10494-107B8;0.0841927!10850-111F4;0.0569539!10851-111F5;0.014711!10852-111F6;8.46616e-05!10853-111F7;0.00694624!10854-111F8;0.0699972!10855-111F9;9.59412e-05!10856-111G1;3.00588e-05!10847-111F1;0.000857119!10846-111E9;0.0577388!10848-111F2;8.99055e-05!10845-111E8;0.0412374!10857-111G2;0.279651!10858-111G3;0.00512891!10156-103A3;0.0756675!11901-125F2;0.689025!11902-125F3;0.0437399!11903-125F4;0.229758!10689-109F5;0.190973!10648-109A9;0.466771!10784-110H1;0.0151751!10744-110C6;0.414395!10772-110F7;0.143999!10474-106I6;0.506022!10600-108E6;0.0127259!10684-109E9;0.0502251!12226-129F3;0.242632!12227-129F4;0.78111!10508-107D4;0.175286!10539-107G8;0.920538!10607-108F4;0.646811!10555-107I6;0.359516!10774-110F9;0.591399!10637-108I7;0.0177732!10663-109C6;0.0903407!10728-110A8;0.0598008!10729-110A9;0.0415035!10430-106D7;0.378634!10730-110B1;0.520419!10813-111B3;0.0754094!10812-111B2;0.232997!10037-101F1;0.247416!10172-103C1;0.827386!10163-103B1;0.937063!10076-102A4;0.569486!10073-102A1;0.798714!10036-101E9;0.757023!10195-103E6;0.668505!10277-104E7;0.776787!10434-106E2;0.368107!10550-107I1;0.354241!10545-107H5;0.153028!10544-107H4;0.153068!10704-109H2;0.0745289!10510-107D6;0.443609!10558-107I9;0.599782!10020-101D2;0.32738!10732-110B3;0.874467!10049-101G4;0.0627381!10698-109G5;0.444105!10437-106E5;0.109198!10417-106C3;0.176031!10035-101E8;0.901175!10171-103B9;0.763126!10157-103A4;0.805714!10034-101E7;0.665545!10072-101I9;0.705889!10199-103F1;0.789523!10200-103F2;0.714787!10697-109G4;0.604809!10723-110A3;0.34193!10179-103C8;0.21898!10160-103A7;0.339549!10180-103C9;0.672247!10162-103A9;0.734791!10021-101D3;0.931103!10840-111E3;0.77515!10706-109H4;0.0358199!10033-101E6;0.261281!10032-101E5;0.759583!10490-107B4;0.713568!10439-106E7;0.0505157!10022-101D4;0.132812!10176-103C5;0.531386!10469-106I1;0.857146!10067-101I4;0.921103!10411-106B6;0.691298!10471-106I3;0.11995!10030-101E3;0.88655!10475-106I7;0.73643!10787-110H4;0.349185!10477-106I9;0.0365541!10695-109G2;0.359367!11771-123I7;0.578096!11772-123I8;0.351787!11773-123I9;0.261347!10093-102C3;0.500365!10442-106F1;0.758745!10442-106F1;0.722711!10201-103F3;0.918655!10639-108I9;0.947281!11843-124H7;0.943897!11841-124H5;0.172693!10693-109F9;0.00285994!10436-106E4;0.71942!10483-107A6;0.517057!10282-104F3;0.931363!10023-101D5;0.175201!10066-101I3;0.183039!10065-101I2;0.898383!10800-110I8;0.987228!10610-108F7;0.732306!10841-111E4;0.807599!10541-107H1;0.0265774!10842-111E5;0.939093!10562-108A4;0.282091!10024-101D6;0.815499!10064-101I1;0.841147!10609-108F6;0.334256!10048-101G3;0.726156!10781-110G7;0.927644!10181-103D1;0.951586!10159-103A6;0.742288!10056-101H2;0.630765!10737-110B8;0.716608!10025-101D7;0.833851!10044-101F8;0.00399608!10424-106D1;0.00958208!10463-106H4;0.158356!10616-108G4;0.436524!10486-107A9;0.979548!10062-101H8;0.913356!10202-103F4;0.600179!10158-103A5;0.790845!10441-106E9;0.560534!10031-101E4;0.0170942!10063-101H9;0.729196!10063-101H9;0.900766!11763-123H8;0.867536!11765-123I1;0.118174!11768-123I4;0.165248!10807-111A6;0.0765257!10790-110H7;0.0677374!10798-110I6;0.0571435!10786-110H3;0.235612!10591-108D6;0.204357!10593-108D8;0.437562!10590-108D5;0.34874!10026-101D8;0.10714!10096-102C6;0.106683!10168-103B6;0.136518!10154-103A1;0.755754!10209-103G2;0.721225!10061-101H7;0.399675!10027-101D9;0.914735!10043-101F7;0.30304!10783-110G9;0.0213165!10028-101E1;0.22295!10060-101H6;0.7504!10203-103F5;0.672646!10059-101H5;0.421212!10047-101G2;0.642456!10029-101E2;0.0537626!10058-101H4;0.875499!10418-106C4;0.995459!10492-107B6;0.152529!10694-109G1;0.0914633!10797-110I5;0.131126!10057-101H3;0.689921!10100-102D1;0.71167!10055-101H1;0.711245!10204-103F6;0.380172!10191-103E2;0.997497!10563-108A5;0.20582
|name=motif_TGTNAC
|name=motif_TGTNAC
|tomtom_result=caup#MA0217.1;0;0.00337319;1.60564;1;5;TGTAAC;TGTTA;-!Spz1#MA0111.1;2;0.00432476;2.05859;1;6;TGTAAC;GCTGTTACCCT;-!Six4#MA0204.1;0;0.00770109;3.66572;1;6;TGTAAC;TGATAC;+!ara#MA0210.1;0;0.00967976;4.60757;1;5;TGTAAC;TGTTA;-!mirr#MA0233.1;0;0.0104816;4.98923;1;5;TGTAAC;TGTTT;-!ovo#MA0126.1;2;0.0111138;5.29015;1;6;TGTAAC;ACTGTTACT;-!prd#MA0239.1;2;0.0111138;5.29015;1;6;TGTAAC;ACTGTTACT;-!NFIL3#MA0025.1;3;0.0116976;5.56807;1;6;TGTAAC;TTATGTAACGT;+!Pax2#MA0067.1;0;0.016996;8.09009;1;6;TGTAAC;AGTCACGG;+!CG11617#MA0173.1;1;0.0177364;8.44252;1;6;TGTAAC;ATGTTAA;-!achi#MA0207.1;1;0.019421;9.2444;1;5;TGTAAC;CTGTCA;-!vis#MA0252.1;1;0.019421;9.2444;1;5;TGTAAC;CTGTCA;-
}}
}}

Latest revision as of 14:50, 7 September 2012

Full Name: motif_TGTNAC

Motif matrix
POACGT
010009088
020090880
030009088
042272227222722272
059088000
060908800

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
caup#MA0217.100.003373191.6056415TGTAACTGTTA-
Spz1#MA0111.120.004324762.0585916TGTAACGCTGTTACCCT-
Six4#MA0204.100.007701093.6657216TGTAACTGATAC+
ara#MA0210.100.009679764.6075715TGTAACTGTTA-
mirr#MA0233.100.01048164.9892315TGTAACTGTTT-
ovo#MA0126.120.01111385.2901516TGTAACACTGTTACT-
prd#MA0239.120.01111385.2901516TGTAACACTGTTACT-
NFIL3#MA0025.130.01169765.5680716TGTAACTTATGTAACGT+
Pax2#MA0067.100.0169968.0900916TGTAACAGTCACGG+
CG11617#MA0173.110.01773648.4425216TGTAACATGTTAA-
achi#MA0207.110.0194219.244415TGTAACCTGTCA-
vis#MA0252.110.0194219.244415TGTAACCTGTCA-
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MacroAPE_1083:Motif_TGTNAC&oldid=2134507"