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MacroAPE 1083:CNhs12623 bu f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;139.27071894326153;36.576679545232295;62.65204200456206;21.692643927228385!2;128.7894678671853;62.165238374447846;35.17154857309624;34.06582...")
 
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2199!12183-129A5;0.295467!12184-129A6;0.357874!10809-111A8;0.28168!10597-108E3;0.228696!10717-109I6;0.0455633!10455-106G5;0.386477!10534-107G3;0.766229!10429-106D6;0.493877!10464-106H5;0.217154!10827-111C8;0.523564!10789-110H6;0.966337!10828-111C9;0.97638!10788-110H5;0.225068!10792-110H9;0.577219!10765-110E9;0.801155!10829-111D1;0.33498!10830-111D2;0.938196!10831-111D3;0.371615!10832-111D4;0.583195!10833-111D5;0.20639!10764-110E8;0.360003!10770-110F5;0.36032!10399-106A3;0.514283!10400-106A4;0.508063!10405-106A9;0.518361!10834-111D6;0.415355!10835-111D7;0.788994!10836-111D8;0.669244!10837-111D9;0.734842!10699-109G6;0.784238!10802-111A1;0.317612!10796-110I4;0.232486!10010-101C1;0.902111!10810-111A9;0.541974!10421-106C7;0.210442!10708-109H6;0.533243!12235-129G3;0.484063!12236-129G4;0.348007!12237-129G5;0.306833!10167-103B5;0.559044!10151-102I7;0.47137!10428-106D5;0.249504!10795-110I3;0.0980721!10805-111A4;0.713111!10052-101G7;0.137833!10189-103D9;0.469677!10589-108D4;0.935672!10425-106D2;0.706188!10427-106D4;0.443289!10702-109G9;0.416234!10432-106D9;0.082659!10496-107C1;0.832583!10718-109I7;0.850064!10011-101C2;0.695153!10053-101G8;0.408443!10686-109F2;0.337463!10084-102B3;0.502288!10012-101C3;0.580039!10085-102B4;0.677563!10482-107A5;0.119595!10419-106C5;0.297868!10080-102A8;0.277468!10760-110E4;0.721879!10709-109H7;0.42136!10710-109H8;0.598223!10703-109H1;0.830113!10719-109I8;0.294409!10642-109A3;0.0653722!10177-103C6;0.00250979!10164-103B2;0.418643!10173-103C2;0.247905!10166-103B4;0.160633!10083-102B2;0.171211!10188-103D8;0.428041!10552-107I3;0.791947!10553-107I4;0.893229!10013-101C4;0.301914!10536-107G5;0.475347!10618-108G6;0.0340393!10423-106C9;0.644461!10785-110H2;0.928098!12238-129G6;0.557713!12239-129G7;0.239947!12240-129G8;0.0298206!10416-106C2;0.233435!10801-110I9;0.402112!10766-110F1;0.578636!10824-111C5;0.897189!10825-111C6;0.564397!10826-111C7;0.52112!10454-106G4;0.52454!10409-106B4;0.680286!10638-108I8;0.318558!10636-108I6;0.573936!10513-107D9;0.517074!10420-106C6;0.970771!10082-102B1;0.354441!10014-101C5;0.212168!10070-101I7;0.290021!10452-106G2;0.390929!10453-106G3;0.0898924!10449-106F8;0.37152!10042-101F6;0.430046!10069-101I6;0.421632!10193-103E4;0.0153765!10631-108I1;0.476475!10438-106E6;0.684492!10488-107B2;0.688797!10196-103E7;0.582433!10071-101I8;0.435088!10071-101I8;0.140895!10041-101F5;0.140962!10451-106G1;0.899134!10450-106F9;0.0822171!10604-108F1;0.14571!10605-108F2;0.180411!10606-108F3;0.492734!10603-108E9;0.0998227!10497-107C2;0.160623!10448-106F7;0.931031!10643-109A4;0.0143524!10426-106D3;0.923425!10431-106D8;0.827626!10197-103E8;0.660228!10443-106F2;0.0820059!10815-111B5;0.105187!10816-111B6;0.901489!10817-111B7;0.682866!10015-101C6;0.864542!10410-106B5;0.037029!10054-101G9;0.125142!10758-110E2;0.264967!10711-109H9;0.532152!10040-101F4;0.325307!10470-106I2;0.322896!10415-106C1;0.823444!10198-103E9;0.90458!10614-108G2;0.152754!10612-108F9;0.921643!10549-107H9;0.833438!10615-108G3;0.389852!10487-107B1;0.131751!10433-106E1;0.600198!10688-109F4;0.257799!10444-106F3;0.609803!10444-106F3;0.0876556!10485-107A8;0.0562239!10413-106B8;0.162975!10175-103C4;0.640152!10161-103A8;0.15425!12131-128D7;0.0753956!10624-108H3;0.0146885!10712-109I1;0.787316!10205-103F7;0.216984!10206-103F8;0.529802!10207-103F9;0.384553!10050-101G5;0.254329!10051-101G6;0.0186348!10016-101C7;0.0712972!10046-101G1;0.374358!10778-110G4;0.749839!10633-108I3;0.272788!10818-111B8;0.322545!10819-111B9;0.686859!10820-111C1;0.648661!10484-107A7;0.706254!10808-111A7;0.479773!10169-103B7;0.757399!10153-102I9;0.567689!13425-144D5;0.263906!13433-144E4;0.766493!13437-144E8;0.784505!11904-125F5;0.942472!11905-125F6;0.0135017!10039-101F3;0.0107244!10791-110H8;0.344477!10017-101C8;0.435931!10045-101F9;0.112133!10509-107D5;0.846152!10839-111E2;0.865414!10692-109F8;0.329892!10079-102A7;0.255204!10078-102A6;0.0814162!10721-110A1;0.108753!10569-108B2;0.282827!10570-108B3;0.039084!10571-108B4;0.0122239!10647-109A8;0.0227329!10752-110D5;0.0443665!10782-110G8;0.563886!10726-110A6;0.14053!10018-101C9;0.0189919!10086-102B5;0.0261734!10182-103D2;0.136406!10165-103B3;0.346866!10499-107C4;0.315544!10408-106B3;0.991303!10019-101D1;0.960188!10068-101I5;0.312107!10075-102A3;0.614928!10077-102A5;0.34614!10727-110A7;0.750192!10775-110G1;0.775115!10412-106B7;0.750542!12231-129F8;0.691242!12232-129F9;0.00233278!12233-129G1;0.0509522!12234-129G2;0.0562955!10414-106B9;0.0167026!10170-103B8;0.320392!10183-103D3;0.422719!10150-102I6;0.432045!10174-103C3;0.228339!10155-103A2;0.875813!10038-101F2;0.485263!10838-111E1;0.643745!10759-110E3;0.0950414!10514-107E1;0.0950262!10465-106H6;0.320363!10691-109F7;0.389665!10843-111E6;0.878832!10844-111E7;0.0477092!11747-123G1;0.132853!11748-123G2;0.0021339!11749-123G3;0.00944343!11750-123G4;0.0440032!11751-123G5;0.270802!11840-124H4;0.0477249!11752-123G6;0.0719354!11753-123G7;0.18851!11754-123G8;0.170441!11755-123G9;0.0205687!11756-123H1;0.0854938!11833-124G6;0.266948!11760-123H5;0.93113!11836-124G9;0.180602!11758-123H3;0.131853!11835-124G8;0.0416389!11762-123H7;0.100304!11838-124H2;0.167093!11757-123H2;0.241086!11759-123H4;0.0927868!11761-123H6;0.108876!11842-124H6;0.216313!11837-124H1;0.425058!10568-108B1;0.223904!13230-141I8;0.584456!13231-141I9;0.0315539!10696-109G3;0.0475206!10493-107B7;0.0557536!10494-107B8;0.256096!10850-111F4;0.742829!10851-111F5;0.498703!10852-111F6;0.112053!10853-111F7;0.0166124!10854-111F8;0.428229!10855-111F9;0.80146!10856-111G1;0.000900635!10847-111F1;0.708756!10846-111E9;0.779356!10848-111F2;0.803321!10845-111E8;0.887129!10857-111G2;0.648384!10858-111G3;0.540708!10156-103A3;0.831553!11901-125F2;0.19502!11902-125F3;0.0508558!11903-125F4;0.026715!10689-109F5;0.16222!10648-109A9;0.671933!10784-110H1;0.987722!10744-110C6;0.378372!10772-110F7;0.836958!10474-106I6;0.505231!10600-108E6;0.88784!10684-109E9;0.156096!12226-129F3;0.236773!12227-129F4;0.909467!10508-107D4;0.652257!10539-107G8;0.034072!10607-108F4;0.146612!10555-107I6;0.0524575!10774-110F9;0.0367165!10637-108I7;0.593896!10663-109C6;0.0341256!10728-110A8;0.0491785!10729-110A9;0.0225754!10430-106D7;0.114214!10730-110B1;0.163029!10813-111B3;0.827068!10812-111B2;0.117295!10037-101F1;0.00398311!10172-103C1;0.391283!10163-103B1;0.334585!10076-102A4;0.136064!10073-102A1;0.376385!10036-101E9;0.0848309!10195-103E6;0.308733!10277-104E7;0.454985!10434-106E2;0.136099!10550-107I1;0.732785!10545-107H5;0.357606!10544-107H4;0.398967!10704-109H2;0.722002!10510-107D6;0.570654!10558-107I9;0.00584537!10020-101D2;0.00716978!10732-110B3;0.9437!10049-101G4;0.975151!10698-109G5;0.00868663!10437-106E5;0.914061!10417-106C3;0.632322!10035-101E8;0.67711!10171-103B9;0.352101!10157-103A4;0.432849!10034-101E7;0.203638!10072-101I9;0.348062!10199-103F1;0.125799!10200-103F2;7.9995e-06!10697-109G4;0.0317419!10723-110A3;0.00205568!10179-103C8;0.432225!10160-103A7;0.146446!10180-103C9;0.141384!10162-103A9;0.913303!10021-101D3;0.20374!10840-111E3;0.775913!10706-109H4;0.335763!10033-101E6;0.883337!10032-101E5;0.487931!10490-107B4;0.429711!10439-106E7;0.852548!10022-101D4;0.768969!10176-103C5;0.413585!10469-106I1;0.293866!10067-101I4;0.334045!10411-106B6;0.805101!10471-106I3;0.68825!10030-101E3;0.584721!10475-106I7;0.819109!10787-110H4;0.124367!10477-106I9;0.437923!10695-109G2;0.106238!11771-123I7;0.960889!11772-123I8;0.0537422!11773-123I9;0.15467!10093-102C3;0.481154!10442-106F1;0.000229082!10442-106F1;0.946153!10201-103F3;0.946503!10639-108I9;0.241237!11843-124H7;0.950267!11841-124H5;0.165062!10693-109F9;0.960182!10436-106E4;0.236652!10483-107A6;0.821432!10282-104F3;0.855492!10023-101D5;0.0755445!10066-101I3;0.0266469!10065-101I2;0.00849198!10800-110I8;0.040234!10610-108F7;0.173061!10841-111E4;0.040878!10541-107H1;0.144279!10842-111E5;0.27333!10562-108A4;0.103186!10024-101D6;0.222062!10064-101I1;0.230613!10609-108F6;0.171991!10048-101G3;0.6476!10781-110G7;0.598539!10181-103D1;0.243498!10159-103A6;0.749063!10056-101H2;0.467386!10737-110B8;0.896608!10025-101D7;0.151124!10044-101F8;0.975875!10424-106D1;0.859624!10463-106H4;0.319186!10616-108G4;0.788088!10486-107A9;0.533112!10062-101H8;0.983287!10202-103F4;0.480475!10158-103A5;0.00765873!10441-106E9;0.245946!10031-101E4;0.0207576!10063-101H9;0.438495!10063-101H9;0.132673!11763-123H8;0.111732!11765-123I1;0.0714927!11768-123I4;0.0344126!10807-111A6;0.0335903!10790-110H7;0.570231!10798-110I6;0.843084!10786-110H3;0.439622!10591-108D6;0.626228!10593-108D8;0.526239!10590-108D5;0.122354!10026-101D8;0.821676!10096-102C6;0.984788!10168-103B6;0.0431486!10154-103A1;0.456166!10209-103G2;0.120397!10061-101H7;0.00987122!10027-101D9;0.0496289!10043-101F7;0.404119!10783-110G9;0.382297!10028-101E1;0.757512!10060-101H6;0.156926!10203-103F5;0.200544!10059-101H5;0.00477216!10047-101G2;0.000583427!10029-101E2;0.0473286!10058-101H4;0.0505625!10418-106C4;0.0298967!10492-107B6;0.0455816!10694-109G1;0.219055!10797-110I5;0.423096!10057-101H3;0.56295!10100-102D1;0.0452963!10055-101H1;0.915002!10204-103F6;0.516653!10191-103E2;0.521057!10563-108A5;0.139626
|name=CNhs12623_bu_f2
|name=CNhs12623_bu_f2
|tomtom_result=ESR1#MA0112.2;10;0.00993984;4.73137;1;8;AACCTGGT;AGGTCAGGGTGACCTGGGCC;-!HAP2#MA0313.1;-3;0.012317;5.86292;1;5;AACCTGGT;TTGGT;+!RIM101#MA0368.1;-2;0.0163472;7.78125;1;6;AACCTGGT;CTTGGCG;-!ESR1#MA0112.2;11;0.0172748;8.22283;1;7;AACCTGGT;GGGGTCACGGTGACCTGG;-
}}
}}

Latest revision as of 14:58, 7 September 2012

Full Name: CNhs12623_bu_f2

Motif matrix
POACGT
1139.2707189432615336.57667954523229562.6520420045620621.692643927228385
2128.789467867185362.16523837444784635.1715485730962434.06582960555489
39.473479950371267218.3625896727270721.0028368157456511.35317798144032
445.1595730749069115.008683128001425.40190454576994794.621923671606
50.00.20035867564772481.1591000299446268258.83262571469186
62.74350334630060382.431713935294823252.585153203393962.431713935294823
79.61325651054658427.812125006469653200.4667887834426722.29991411982527
840.27264048671917668.5388603666770340.288482416875986111.09210115001211

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
ESR1#MA0112.2100.009939844.7313718AACCTGGTAGGTCAGGGTGACCTGGGCC-
HAP2#MA0313.1-30.0123175.8629215AACCTGGTTTGGT+
RIM101#MA0368.1-20.01634727.7812516AACCTGGTCTTGGCG-
ESR1#MA0112.2110.01727488.2228317AACCTGGTGGGGTCACGGTGACCTGG-
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