Personal tools

MCL coexpression mm9:633: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{MCL_coexpression_mm9
{{MCL_coexpression_mm9
|coexpression_dpi_cluster_scores_mean=0.0779682086480614,-0.0364787807371565,-0.0364787807371565,-0.0364787807371565,-0.0364787807371565,-0.0161959788577752,-0.0213427078689224,0.286730881741056,0.200516937191062,0.141626769528555,0.0451221601257264,0.0140447927328062,0.362592220843398,0.259557076162458,0.218478712050428,0.287026445680563,0.298080236679303,0.361402166276273,0.424534089943978,0.323085111602027,0.100746709214014,0.635319970713063,0.58687813015548,0.0623228914285007,0.02118077308067,-0.0364787807371565,-0.0364787807371565,-0.0364787807371565,-0.0158727330142302,0.022373475024547,-0.0127582117053214,0.0250381099875896,0.0268539642072791,-0.0364787807371565,-0.0118387117693888,-0.0243358827603428,-0.0291435470032615,0.271797203112525,0.153281635763436,0.322172448598462,0.302068318592033,0.34066094730523,0.262975168052049,-0.0271154004233944,-0.025377622918212,-0.0298255609195468,-0.0364787807371565,-0.020904915636401,-0.0129565705766191,-0.0164952286297372,-0.0364787807371565,-0.0364787807371565,0.354491835057374,0.33640375885539,0.452445243133885,-0.0184015255025653,-0.0364787807371565,-0.0200601212716522,-0.023063976812353,0.0138134710372953,-0.00415346464127782,-0.0364787807371565,-0.011360623614594,-0.0111396281807132,-0.00933281685923979,0.0297814167474101,-0.00537816230886525,0.0162997567619369,-0.0063674165384182,-0.0264791200541747,-0.0150797750855683,-0.0186369939492137,-0.0220345926660755,-0.00187407806519596,-0.000249158509983955,-0.0107401910873057,0.00947252880485391,-0.0189305663994375,0.00429212590992582,0.000599092051531932,-0.00299391608164585,-0.00829524552583946,0.0121269823446439,-0.00122550583915761,0.00141920784925387,0.00220163415132713,-0.00667139262372274,0.00130250730932385,-0.00898196220329916,-0.0251689677587033,0.0633771115125826,-0.0364787807371565,-0.0364787807371565,-0.0364787807371565,-0.0364787807371565,-0.0218627238320516,0.105410851497292,-0.0248984494433853,-0.0364787807371565,-0.0364787807371565,0.0362972113109999,-0.0364787807371565,-0.0364787807371565,-0.0364787807371565,-0.0145379012017893,-0.0186468200454509,-0.0203253433287946,0.0906656803763024,0.514801667177276,0.0157100338982944,0.0426740400241254,0.0115673470738094,0.0214272801815602,0.0205426641727591,0.0141167246271278,-0.0136058451170035,0.00554549049630046,0.112102706619441,0.293059344200435,0.0793605897390058,0.270349563028595,0.251038863846192,0.0466049502153102,-0.0364787807371565,-0.00644724025646331,0.0763412736014047,0.731549514170698,0.472119711705307,0.631317044755665,6.931999653339e-05,-0.0216052586413196,-0.0229542788852079,-0.0111685613492168,-0.0184985552338747,-0.0227575790788681,-0.0030134024564665,0.0023649958643309,0.31260666847386,0.0400679355503301,-0.0150694654169135,0.000576688168011688,0.0164988900809589,0.00416225888001504,0.0419371299557361,0.0713409757071074,0.059189892755349,0.0543798490851693,0.0117480639295643,-0.028771575630827,0.00659297771206009,0.0092615459571556,0.0235255765417393,0.0522127267408227,0.0451601991458824,0.021838260351865,0.0148238494519663,0.472381629575873,0.46764259886681,0.450911782438672,0.0492576785007442,0.047861533890194,0.0176602480381652,0.0741375645956125,0.0666450652599552,0.0592262418569867,0.0053095530466204,0.0204537251956884,0.0642225374420144,0.0349597452424966,0.0104720009463382,0.0365957367568191,0.0648369827956765,0.0852500885121485,0.0540396371359388,0.002691249767229,0.00911252388425012,0.13556600086414,-0.00118940679415061,-0.000792042211029119,-0.00349909730854061,-0.00494905596892585,0.0365226784349323,-0.0364787807371565,-0.0227279995385962,-0.0211466592374108,0.00406222290789491,0.0133825649368828,0.0249839375786559,-0.0023826972383048,-0.0364787807371565,-0.0210273486171102,0.00352405651145255,-0.0032887461697067,-0.00880569278857977,-0.0364787807371565,0.00513725680709347,-0.00953934242355311,-0.00263505242755078,0.00255212451748332,0.00451595365880744,0.0170457145907666,-0.0194501816851955,-0.0159775712651393,0.201746619864767,0.204581081330236,0.23426992049646,0.232637682053054,0.239170702150563,0.199045283234168,0.172146358797733,0.225504202679773,0.12236931221238,-0.00129904781803045,0.0945744997973805,0.0255568006227414,-0.00091329565234309,-0.0299642197359655,0.0479422638436717,0.405845947638399,-0.00602094021001882,0.0375651907869066,0.0628561831750949,0.110241246004721,0.214913462852107,0.204138275297198,0.239549934570995,0.285601749249801,0.284649746039894,0.272093294667212,0.342515422866558,0.325404497288964,0.256803597533595,0.0547109730167893,0.078320772728063,0.00635200624793432,-0.00761628662835384,-0.0247216758834961,-0.00502683492754453,-0.030485261881184,0.00796106183558809,-0.0171643863491647,-0.0104511696822836,-0.0119416713144674,-0.00153318915042363,-0.0069239061003826,-0.0122068866793815,-0.00963917946870202,-0.0162335971844481,-0.0134794487907443,-0.0168839543520322,0.0489847626257347,0.0171046468511358,0.0355521181813349,0.0812541066188367,-0.0364787807371565,-0.0107348322284112,-0.00737892294899098,-0.0160139856528654,-0.00583214432452818,0.0331153792838988,0.0145708548254226,0.0572671640349154,0.0421365777724259,0.00454628805220207,-0.00805698226869609,-0.00849824256539555,0.0579122118961342,0.0228422847000007,0.0111011948634854,-0.00580996604750508,0.0576043572361498,0.0467834054573154,0.0124910294189968,0.0347335864289129,0.068677134779172,-0.0213074276792278,-0.0128748111168345,0.0578316125689398,0.0834912671049493,0.0180076817804765,0.0115215407545369,0.025839981049762,0.0119516100753772,0.00283821003582423,0.341761807665213,0.12984819763445,0.243227242430802,0.354663336677456,0.400627950980501,0.330453308052098,1.06448446721563,1.0520702046093,1.05541781375838,-0.010017545752016,0.0153949177537657,0.0151038447523402,-0.0129371000718698,0.0115307284305876,0.00122152159794637,0.0431032572393991,0.0258424883819173,0.000239531492818728,-0.0090746829342646,0.267389611086359,-0.00117851255807671,-0.00964551754169183,-0.012298122524013,-0.0224481613087715,-0.00916125188499405,-0.0126584123165981,-0.0233354952308904,0.0143667571356507,0.0788743440165836,0.052483789672559,0.0566751467303441,0.706365401410505,0.348168901178605,0.502620259655433,0.540524570778318,0.540354147418821,0.636088586630833,0.622576371820969,0.609421484150691,0.675400593647593,0.702956004894355,0.679559387964237,0.694561230104484,0.728011353021466,0.845323087694516,0.0674213807469933,-0.0364787807371565,-0.0299632054412505,-0.0364787807371565,0.0402546754480556,0.115737322036399,0.208348267408755,0.181587445653619,-0.00905039749610927,-0.0364787807371565,-0.0215288179640923,-0.0364787807371565,-0.00415826298644758,-0.0364787807371565,-0.0364787807371565,-0.0364787807371565,-0.0218002174405913,-0.0364787807371565,-0.0364787807371565,-0.0286814331812303,-0.0133149895346619,0.0228230339199678,0.0421222132919736,0.0577813543751595,0.00751553859919705,0.0999291009072834,0.0600862380500577,0.134991112372443,0.0750829499644957,0.131435679166685,0.0466890425250055,0.0732556950030944,0.0636004879874762,0.0792303929798923,0.0798393157734121,0.0713503043942425,0.0644883882653746,0.0281256818385399,0.0605835944233561,0.0495030527472072,0.0441137479687311,0.0628174992987837,0.0807477991460606,0.099851810968998,0.084567337695921,0.0742568152019611,0.0833880147356136,0.0688650298987279,0.0865991477435825,0.0435158121445885,0.0711208203921351,0.0979760142424797,0.0792747489124907,0.0474650062547127,0.0537548327142855,0.0444868672734124,0.109850785216123,0.0653374794183309,0.114096041283637,0.144085476450665
|coexpression_dpi_cluster_scores_mean=0.0779682086480614,-0.0364787807371565,-0.0364787807371565,-0.0364787807371565,-0.0364787807371565,-0.0161959788577752,-0.0213427078689224,0.286730881741056,0.200516937191062,0.141626769528555,0.0451221601257264,0.0140447927328062,0.362592220843398,0.259557076162458,0.218478712050428,0.287026445680563,0.298080236679303,0.361402166276273,0.424534089943978,0.323085111602027,0.100746709214014,0.635319970713063,0.58687813015548,0.0623228914285007,0.02118077308067,-0.0364787807371565,-0.0364787807371565,-0.0364787807371565,-0.0158727330142302,0.022373475024547,-0.0127582117053214,0.0250381099875896,0.0268539642072791,-0.0364787807371565,-0.0118387117693888,-0.0243358827603428,-0.0291435470032615,0.271797203112525,0.153281635763436,0.322172448598462,0.302068318592033,0.34066094730523,0.262975168052049,-0.0271154004233944,-0.025377622918212,-0.0298255609195468,-0.0364787807371565,-0.020904915636401,-0.0129565705766191,-0.0164952286297372,-0.0364787807371565,-0.0364787807371565,0.354491835057374,0.33640375885539,0.452445243133885,-0.0184015255025653,-0.0364787807371565,-0.0200601212716522,-0.023063976812353,0.0138134710372953,-0.00415346464127782,-0.0364787807371565,-0.011360623614594,-0.0111396281807132,-0.00933281685923979,0.0297814167474101,-0.00537816230886525,0.0162997567619369,-0.0063674165384182,-0.0264791200541747,-0.0150797750855683,-0.0186369939492137,-0.0220345926660755,-0.00187407806519596,-0.000249158509983955,-0.0107401910873057,0.00947252880485391,-0.0189305663994375,0.00429212590992582,0.000599092051531932,-0.00299391608164585,-0.00829524552583946,0.0121269823446439,-0.00122550583915761,0.00141920784925387,0.00220163415132713,-0.00667139262372274,0.00130250730932385,-0.00898196220329916,-0.0251689677587033,0.0633771115125826,-0.0364787807371565,-0.0364787807371565,-0.0364787807371565,-0.0364787807371565,-0.0218627238320516,0.105410851497292,-0.0248984494433853,-0.0364787807371565,-0.0364787807371565,0.0362972113109999,-0.0364787807371565,-0.0364787807371565,-0.0364787807371565,-0.0145379012017893,-0.0186468200454509,-0.0203253433287946,0.0906656803763024,0.514801667177276,0.0157100338982944,0.0426740400241254,0.0115673470738094,0.0214272801815602,0.0205426641727591,0.0141167246271278,-0.0136058451170035,0.00554549049630046,0.112102706619441,0.293059344200435,0.0793605897390058,0.270349563028595,0.251038863846192,0.0466049502153102,-0.0364787807371565,-0.00644724025646331,0.0763412736014047,0.731549514170698,0.472119711705307,0.631317044755665,6.931999653339e-05,-0.0216052586413196,-0.0229542788852079,-0.0111685613492168,-0.0184985552338747,-0.0227575790788681,-0.0030134024564665,0.0023649958643309,0.31260666847386,0.0400679355503301,-0.0150694654169135,0.000576688168011688,0.0164988900809589,0.00416225888001504,0.0419371299557361,0.0713409757071074,0.059189892755349,0.0543798490851693,0.0117480639295643,-0.028771575630827,0.00659297771206009,0.0092615459571556,0.0235255765417393,0.0522127267408227,0.0451601991458824,0.021838260351865,0.0148238494519663,0.472381629575873,0.46764259886681,0.450911782438672,0.0492576785007442,0.047861533890194,0.0176602480381652,0.0741375645956125,0.0666450652599552,0.0592262418569867,0.0053095530466204,0.0204537251956884,0.0642225374420144,0.0349597452424966,0.0104720009463382,0.0365957367568191,0.0648369827956765,0.0852500885121485,0.0540396371359388,0.002691249767229,0.00911252388425012,0.13556600086414,-0.00118940679415061,-0.000792042211029119,-0.00349909730854061,-0.00494905596892585,0.0365226784349323,-0.0364787807371565,-0.0227279995385962,-0.0211466592374108,0.00406222290789491,0.0133825649368828,0.0249839375786559,-0.0023826972383048,-0.0364787807371565,-0.0210273486171102,0.00352405651145255,-0.0032887461697067,-0.00880569278857977,-0.0364787807371565,0.00513725680709347,-0.00953934242355311,-0.00263505242755078,0.00255212451748332,0.00451595365880744,0.0170457145907666,-0.0194501816851955,-0.0159775712651393,0.201746619864767,0.204581081330236,0.23426992049646,0.232637682053054,0.239170702150563,0.199045283234168,0.172146358797733,0.225504202679773,0.12236931221238,-0.00129904781803045,0.0945744997973805,0.0255568006227414,-0.00091329565234309,-0.0299642197359655,0.0479422638436717,0.405845947638399,-0.00602094021001882,0.0375651907869066,0.0628561831750949,0.110241246004721,0.214913462852107,0.204138275297198,0.239549934570995,0.285601749249801,0.284649746039894,0.272093294667212,0.342515422866558,0.325404497288964,0.256803597533595,0.0547109730167893,0.078320772728063,0.00635200624793432,-0.00761628662835384,-0.0247216758834961,-0.00502683492754453,-0.030485261881184,0.00796106183558809,-0.0171643863491647,-0.0104511696822836,-0.0119416713144674,-0.00153318915042363,-0.0069239061003826,-0.0122068866793815,-0.00963917946870202,-0.0162335971844481,-0.0134794487907443,-0.0168839543520322,0.0489847626257347,0.0171046468511358,0.0355521181813349,0.0812541066188367,-0.0364787807371565,-0.0107348322284112,-0.00737892294899098,-0.0160139856528654,-0.00583214432452818,0.0331153792838988,0.0145708548254226,0.0572671640349154,0.0421365777724259,0.00454628805220207,-0.00805698226869609,-0.00849824256539555,0.0579122118961342,0.0228422847000007,0.0111011948634854,-0.00580996604750508,0.0576043572361498,0.0467834054573154,0.0124910294189968,0.0347335864289129,0.068677134779172,-0.0213074276792278,-0.0128748111168345,0.0578316125689398,0.0834912671049493,0.0180076817804765,0.0115215407545369,0.025839981049762,0.0119516100753772,0.00283821003582423,0.341761807665213,0.12984819763445,0.243227242430802,0.354663336677456,0.400627950980501,0.330453308052098,1.06448446721563,1.0520702046093,1.05541781375838,-0.010017545752016,0.0153949177537657,0.0151038447523402,-0.0129371000718698,0.0115307284305876,0.00122152159794637,0.0431032572393991,0.0258424883819173,0.000239531492818728,-0.0090746829342646,0.267389611086359,-0.00117851255807671,-0.00964551754169183,-0.012298122524013,-0.0224481613087715,-0.00916125188499405,-0.0126584123165981,-0.0233354952308904,0.0143667571356507,0.0788743440165836,0.052483789672559,0.0566751467303441,0.706365401410505,0.348168901178605,0.502620259655433,0.540524570778318,0.540354147418821,0.636088586630833,0.622576371820969,0.609421484150691,0.675400593647593,0.702956004894355,0.679559387964237,0.694561230104484,0.728011353021466,0.845323087694516,0.0674213807469933,-0.0364787807371565,-0.0299632054412505,-0.0364787807371565,0.0402546754480556,0.115737322036399,0.208348267408755,0.181587445653619,-0.00905039749610927,-0.0364787807371565,-0.0215288179640923,-0.0364787807371565,-0.00415826298644758,-0.0364787807371565,-0.0364787807371565,-0.0364787807371565,-0.0218002174405913,-0.0364787807371565,-0.0364787807371565,-0.0286814331812303,-0.0133149895346619,0.0228230339199678,0.0421222132919736,0.0577813543751595,0.00751553859919705,0.0999291009072834,0.0600862380500577,0.134991112372443,0.0750829499644957,0.131435679166685,0.0466890425250055,0.0732556950030944,0.0636004879874762,0.0792303929798923,0.0798393157734121,0.0713503043942425,0.0644883882653746,0.0281256818385399,0.0605835944233561,0.0495030527472072,0.0441137479687311,0.0628174992987837,0.0807477991460606,0.099851810968998,0.084567337695921,0.0742568152019611,0.0833880147356136,0.0688650298987279,0.0865991477435825,0.0435158121445885,0.0711208203921351,0.0979760142424797,0.0792747489124907,0.0474650062547127,0.0537548327142855,0.0444868672734124,0.109850785216123,0.0653374794183309,0.114096041283637,0.144085476450665
|coexpression_dpi_cluster_scores_median=0,0,0,0,0,0,0,0.216328664154126,0.107744855247029,0.0537437115083501,0.0686377264886741,0,0.226549106464441,0.230286214243433,0.124865908594952,0.183865199222184,0.230336981122899,0.252526681274343,0.301168353652597,0.0931135830125231,0.0354470656487682,0.489270649983292,0.557747488109287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0913237973873984,0,0.311127917657318,0.200913802025349,0.226095853111613,0.111360456049086,0,0,0,0,0,0,0,0,0,0.264561190163111,0.328779227340095,0.302824565438938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0570741246689917,0,0,0,0,0,0,0,0,0,0,0.0893284091371433,0.522501738221133,0,0,0,0,0,0,0,0,0.0586534975690397,0,0.0651189800845078,0.22076806852419,0.0979003319168054,0,0,0,0.0895432897139293,0.650757965746041,0.3423842760398,0.549175539886958,0,0,0,0,0,0,0,0,0.242154123277983,0,0,0,0,0,0,0.0148404681820558,0,0,0,0,0,0,0,0,0,0,0,0.381011483184416,0.485548704294405,0.358374580892484,0,0,0,0,0.0544193564384984,0.0270885990722609,0,0,0.0479619276176895,0,0,0.0338533374824575,0.0592603993571966,0.0861996515928926,0.0546921007390138,0,0,0,0,0,0,0,0,0,0,0,0,0,0.00501377892047823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0670132089181356,0.0779341159210384,0.0880872011895838,0.0802151268900158,0.170952023220814,0.098514232005992,0.109813392994768,0.0983477188567708,0,0,0,0,0,0,0,0.191523550257637,0,0.032824094098017,0,0.0177683805958387,0.0516956994912338,0.0189463163211074,0.143098306652819,0.0635717028550276,0.159245076116426,0.169781468279214,0.218916923110154,0.228076808807707,0.110353348438991,0,0.0113555296225769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0576433181427177,0,0,0.100825516771532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0177618591401243,0,0,0,0.0650059127791652,0,0,0,0,0,0.268192740050004,0.0814866010703366,0.136843881272943,0.243899288077882,0.32088413035573,0.226943730202278,1.13284872037846,1.06581529671443,1.01693303152683,0,0,0,0,0,0,0,0.034489466458534,0,0,0,0,0,0,0,0,0,0,0,0.00889475262227818,0,0.0202294931938322,0.680528903438534,0.345638597199581,0.599732216688215,0.523561112715597,0.416846833228226,0.475208112566132,0.575706763751748,0.46537747527624,0.594174469688291,0.61536910438391,0.732881255477356,0.681318801672655,0.676900359913839,0.849885947590187,0,0,0,0,0,0.0779027259600106,0.135547100918658,0.0843504501108034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120876255993453,0.0978461107777356,0.098117166361508,0,0.0745542549075041,0.0269518943326477,0.0690411384905589,0,0.0690628484267335,0,0,0,0,0,0,0.0966510833787759,0.0649668655099168,0.0528152504115842,0,0.101427320830301,0.0553034373508932,0,0.031949268620616,0.0408018333703219,0,0.0625582350728301,0,0,0,0.024014957680951,0,0.0865703124974023,0.0905641158318875
|gostat_on_MCL_coexpression=GO:0030274;LIM domain binding;0.0269544732372761;16825!GO:0045647;negative regulation of erythrocyte differentiation;0.0319611166067959;16825!GO:0021692;cerebellar Purkinje cell layer morphogenesis;0.0319611166067959;16825!GO:0045646;regulation of erythrocyte differentiation;0.0319611166067959;16825!GO:0021694;cerebellar Purkinje cell layer formation;0.0319611166067959;16825!GO:0021702;cerebellar Purkinje cell differentiation;0.0319611166067959;16825!GO:0021697;cerebellar cortex formation;0.0319611166067959;16825!GO:0021533;cell differentiation in hindbrain;0.0319611166067959;16825!GO:0009948;anterior/posterior axis specification;0.0319611166067959;16825!GO:0021680;cerebellar Purkinje cell layer development;0.0319611166067959;16825!GO:0021696;cerebellar cortex morphogenesis;0.0319611166067959;16825!GO:0021587;cerebellum morphogenesis;0.0319611166067959;16825!GO:0021575;hindbrain morphogenesis;0.0319611166067959;16825!GO:0009798;axis specification;0.0319611166067959;16825!GO:0021695;cerebellar cortex development;0.0319611166067959;16825!GO:0045638;negative regulation of myeloid cell differentiation;0.0319611166067959;16825!GO:0022037;metencephalon development;0.0339834501736818;16825!GO:0021549;cerebellum development;0.0339834501736818;16825!GO:0000082;G1/S transition of mitotic cell cycle;0.0339834501736818;17863!GO:0001702;gastrulation with mouth forming second;0.0416765360980862;16825!GO:0045637;regulation of myeloid cell differentiation;0.0447987456827315;16825!GO:0030218;erythrocyte differentiation;0.0451311553378454;16825!GO:0051325;interphase;0.0451311553378454;17863!GO:0051329;interphase of mitotic cell cycle;0.0451311553378454;17863!GO:0030902;hindbrain development;0.0451311553378454;16825!
|gostat_on_MCL_coexpression=GO:0030274;LIM domain binding;0.0269544732372761;16825!GO:0045647;negative regulation of erythrocyte differentiation;0.0319611166067959;16825!GO:0021692;cerebellar Purkinje cell layer morphogenesis;0.0319611166067959;16825!GO:0045646;regulation of erythrocyte differentiation;0.0319611166067959;16825!GO:0021694;cerebellar Purkinje cell layer formation;0.0319611166067959;16825!GO:0021702;cerebellar Purkinje cell differentiation;0.0319611166067959;16825!GO:0021697;cerebellar cortex formation;0.0319611166067959;16825!GO:0021533;cell differentiation in hindbrain;0.0319611166067959;16825!GO:0009948;anterior/posterior axis specification;0.0319611166067959;16825!GO:0021680;cerebellar Purkinje cell layer development;0.0319611166067959;16825!GO:0021696;cerebellar cortex morphogenesis;0.0319611166067959;16825!GO:0021587;cerebellum morphogenesis;0.0319611166067959;16825!GO:0021575;hindbrain morphogenesis;0.0319611166067959;16825!GO:0009798;axis specification;0.0319611166067959;16825!GO:0021695;cerebellar cortex development;0.0319611166067959;16825!GO:0045638;negative regulation of myeloid cell differentiation;0.0319611166067959;16825!GO:0022037;metencephalon development;0.0339834501736818;16825!GO:0021549;cerebellum development;0.0339834501736818;16825!GO:0000082;G1/S transition of mitotic cell cycle;0.0339834501736818;17863!GO:0001702;gastrulation with mouth forming second;0.0416765360980862;16825!GO:0045637;regulation of myeloid cell differentiation;0.0447987456827315;16825!GO:0030218;erythrocyte differentiation;0.0451311553378454;16825!GO:0051325;interphase;0.0451311553378454;17863!GO:0051329;interphase of mitotic cell cycle;0.0451311553378454;17863!GO:0030902;hindbrain development;0.0451311553378454;16825!
}}
}}

Revision as of 12:44, 11 October 2012


Phase1 CAGE Peaks

 Short description
Mm9::chr10:126512385..126512454,+p@chr10:126512385..126512454
+
Mm9::chr10:20881239..20881254,-p5@Myb
Mm9::chr10:41788412..41788423,-p@chr10:41788412..41788423
-
Mm9::chr16:78546887..78546912,-p@chr16:78546887..78546912
-
Mm9::chr17:28144291..28144354,+p6@Anks1
Mm9::chr19:46119469..46119478,-p15@Ldb1
Mm9::chr7:134624130..134624140,+p@chr7:134624130..134624140
+
Mm9::chr7:82731249..82731262,+p@chr7:82731249..82731262
+
Mm9::chr7:82731272..82731298,+p@chr7:82731272..82731298
+
Mm9::chr7:82731305..82731334,+p@chr7:82731305..82731334
+
Mm9::chr8:75170473..75170495,+p3@Nwd1


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

GO IDGO nameFDR corrected p-value
GO:0030274LIM domain binding0.0269544732372761
GO:0045647negative regulation of erythrocyte differentiation0.0319611166067959
GO:0021692cerebellar Purkinje cell layer morphogenesis0.0319611166067959
GO:0045646regulation of erythrocyte differentiation0.0319611166067959
GO:0021694cerebellar Purkinje cell layer formation0.0319611166067959
GO:0021702cerebellar Purkinje cell differentiation0.0319611166067959
GO:0021697cerebellar cortex formation0.0319611166067959
GO:0021533cell differentiation in hindbrain0.0319611166067959
GO:0009948anterior/posterior axis specification0.0319611166067959
GO:0021680cerebellar Purkinje cell layer development0.0319611166067959
GO:0021696cerebellar cortex morphogenesis0.0319611166067959
GO:0021587cerebellum morphogenesis0.0319611166067959
GO:0021575hindbrain morphogenesis0.0319611166067959
GO:0009798axis specification0.0319611166067959
GO:0021695cerebellar cortex development0.0319611166067959
GO:0045638negative regulation of myeloid cell differentiation0.0319611166067959
GO:0022037metencephalon development0.0339834501736818
GO:0021549cerebellum development0.0339834501736818
GO:0000082G1/S transition of mitotic cell cycle0.0339834501736818
GO:0001702gastrulation with mouth forming second0.0416765360980862
GO:0045637regulation of myeloid cell differentiation0.0447987456827315
GO:0030218erythrocyte differentiation0.0451311553378454
GO:0051325interphase0.0451311553378454
GO:0051329interphase of mitotic cell cycle0.0451311553378454
GO:0030902hindbrain development0.0451311553378454



Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br>disease_data<br>

Cell Type
Ontology termp-valuen

Uber Anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MCL_coexpression_mm9:633&oldid=2149919"