Personal tools

MCL coexpression mm9:1330: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{MCL_coexpression_mm9
{{MCL_coexpression_mm9
|coexpression_dpi_cluster_scores_mean=0.108138443851538,-0.029338595924336,-0.00219480154239002,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.0198043927427415,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.0187373136986772,-0.029338595924336,-0.00373379428085818,0.251278723264919,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.0148426926271034,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,0.0859553883187565,0.0791913990404685,0.158703546973446,0.438956376258528,0.384966254816326,0.733624425040661,0.714731978705907,0.279423965693781,0.405222143044339,-0.029338595924336,-0.029338595924336,-0.029338595924336,0.0550180596475721,0.052038365775022,0.0520595322836672,0.300674418145096,0.277893297018307,0.178097181400621,0.101124276413576,0.154861222974457,-0.00244643193025167,0.0496423563806018,0.0095144090246,0.7620765235442,0.857667082453506,0.235469069274208,0.313402484050178,0.321679098661092,0.51256892320052,0.565831357959732,0.223562894495659,0.274282035952488,0.187736871661759,0.42803973125166,0.563698271583903,0.560353533803152,0.312966663604612,0.316406774120356,0.303044736116705,0.529956182047777,0.416430347355327,0.531939155705401,0.432397187156804,0.445112155772348,0.343893304412691,0.0333661225791905,0.0790815411250237,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,0.0545136096208221,-0.029338595924336,-0.029338595924336,-0.00743746564235603,0.185943535039991,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,0.0303497408032525,0.107861515823049,-0.00930222278733605,0.0137807820244457,0.0838351559429901,0.0281553433013782,0.0189651514152216,0.125933429036908,-0.0131097690456796,-0.0133495376136837,-1.18471398161656e-05,-0.029338595924336,0.00180373472481807,-0.000452165798377617,-0.0007236010282239,-0.029338595924336,0.909077563742072,0.987709334420283,0.0283087087857475,-0.029338595924336,-0.029338595924336,-0.029338595924336,0.47143901855915,0.562504711176016,0.364093750252396,0.585372784879658,0.589042388287353,0.612616100370671,0.649567716925353,0.156556569993617,-0.013255639531387,-0.029338595924336,0.190474004169944,0.067184864004368,-0.00195616068066035,0.123700374267398,0.125677356324204,0.257398969777558,0.166423607471439,0.221793536109289,0.40835328834923,0.0557452816223808,0.0597258572482053,0.0646113394650125,0.0449215561290881,0.0963366941779456,0.0739382630228483,0.00915632127762658,0.0658854234439069,-0.029338595924336,-0.029338595924336,-0.029338595924336,0.0480877988198944,0.0244717925508207,-0.00707550538219757,0.00142142753955018,-0.00333572900701888,-0.00856982191875698,-0.029338595924336,-0.0121364485247275,-0.00535763211549127,0.0243363264277398,-0.00733344341013442,-0.0128201130461179,-0.0194618626981366,-0.029338595924336,-0.029338595924336,0.548368010793516,0.511624486711163,-0.029338595924336,-0.012354953358895,0.0908244651276922,0.0240450295578143,0.0380036156723242,0.00848830109257778,0.0263623397848605,-0.0167337131589891,-0.00122970650813552,0.0435245141034963,0.0193482363130773,0.00804199452017123,0.0202784149233908,0.0170753477724469,-0.0151747831476269,-0.0161935373872136,0.0498220684499635,0.0310091463422993,0.0799224988905089,0.0356430049172226,0.0250586589576889,0.0595767547098999,-0.011841829258102,-0.0193728659360801,-0.00140333826450902,-0.0133727929521085,-0.029338595924336,-0.00700085961829082,0.00764840682641525,-0.014657395726072,-0.0159694081093334,-0.0136996334140537,-0.0129195572566707,-0.029338595924336,-0.0184624849627247,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.000842236515528683,-0.029338595924336,0.0848615534003395,0.0308199487684814,0.0406741327912648,0.0290364552703569,0.00278549638703005,-0.0138826036275069,0.0332193587114912,0.00244725550317778,0.0854344560709571,0.0497389535531647,0.00216317825188612,-0.029338595924336,-0.0109463711845042,-0.029338595924336,-0.029338595924336,-0.000388562288874519,-0.0117004050800677,0.647220023207612,0.702873699471758,0.0672488332294038,0.0669993352374628,0.122661621922967,0.131636767303868,0.246783177327881,0.161473069247901,0.231909382639941,0.272054684052137,0.0811269466525391,0.214586755661037,0.169437811251454,0.506654809998854,0.14175760047295,0.149358567804271,0.242800805194066,0.21845599006299,-0.029338595924336,0.0703796016702301,0.0431309594084388,0.0188406343645771,0.0229835727344097,-0.0099352365943112,0.000818824351041983,-0.0068942816790907,-0.00726876946343602,0.00611802364553842,-0.029338595924336,-0.029338595924336,0.0328673162266948,0.0896955962593986,0.11460901869825,0.0902976055280647,0.066206091017622,0.169506875854317,0.189273231120766,0.220434188001904,-0.0140800131576708,0.0101364021229356,0.0115329018304536,-0.00870903770430708,0.0637607994771864,0.00439780437151332,0.00981776791316942,-0.0183376713304293,0.00390647071430198,0.748301270398466,0.0419888136036077,0.0713735478879112,0.00755622280559763,-0.0168467432979736,0.015976716078552,-0.029338595924336,-0.029338595924336,-0.0198575365549379,-0.029338595924336,0.0191736682150883,0.0820968392965703,0.0692972018262946,0.0503837521407555,0.0333904520879775,0.0254825340068036,-0.00289611494888087,0.0487013968990718,-0.029338595924336,-0.00556297015914575,-0.029338595924336,0.00301998323982048,0.0956713653493197,0.0815183007658139,0.124377720086175,0.0807525906341285,0.0706093490293955,0.117401185118712,0.0130247074752823,0.0186755286095603,-0.0136759043304221,0.0256243943610152,-0.029338595924336,-0.00470267377439333,0.0168054062070226,-0.020497260557421,-0.0174179894984196,-0.029338595924336,-0.0137455007436485,-0.029338595924336,-0.0154139009913941,-0.029338595924336,-0.0223854706756567,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.0145470755913795,-0.029338595924336,-0.0231198503669452,-0.0181052729490041,-0.00376877686912518,0.00801157827396222,0.0678004948642714,0.0105451821419021,-0.029338595924336,0.579567506532032,0.634676696413249,0.590957711308422,0.602633157743107,0.551951268651159,0.575449628499803,0.453465559630437,0.427844177561094,0.409786663833046,0.462486589996692,0.0544540252854211,0.110345311896798,0.0796187733132322,0.0991705030419251,0.0726396473722396,0.0944682059517533,0.0712366358193122,0.0989890580947301,0.0310995320723906,0.0945997188974944,0.0953274269516926,0.104686883165952,0.0636153029261923,0.0912738461706677,0.11394331809335,0.103682865777829,0.072913682574088,0.150654355874148,0.163623899568739,0.0956944164706401,0.102337362165956,0.0521139211907866,0.029843110360759,0.0407753366197772,0.0707206062192609,0.0654679919203019,0.0613731763036345,0.136194468564642,0.0769093153260194,0.0351422318913334,0.0846725802287029,0.125843387898335,0.13378911991832,0.0917583799019563,0.0637148893263052,0.29214196516619,0.031522130260694,0.0652800011749334,0.100895839283641,0.0573269690023518,0.0666472698240829
|coexpression_dpi_cluster_scores_mean=0.108138443851538,-0.029338595924336,-0.00219480154239002,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.0198043927427415,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.0187373136986772,-0.029338595924336,-0.00373379428085818,0.251278723264919,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.0148426926271034,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,0.0859553883187565,0.0791913990404685,0.158703546973446,0.438956376258528,0.384966254816326,0.733624425040661,0.714731978705907,0.279423965693781,0.405222143044339,-0.029338595924336,-0.029338595924336,-0.029338595924336,0.0550180596475721,0.052038365775022,0.0520595322836672,0.300674418145096,0.277893297018307,0.178097181400621,0.101124276413576,0.154861222974457,-0.00244643193025167,0.0496423563806018,0.0095144090246,0.7620765235442,0.857667082453506,0.235469069274208,0.313402484050178,0.321679098661092,0.51256892320052,0.565831357959732,0.223562894495659,0.274282035952488,0.187736871661759,0.42803973125166,0.563698271583903,0.560353533803152,0.312966663604612,0.316406774120356,0.303044736116705,0.529956182047777,0.416430347355327,0.531939155705401,0.432397187156804,0.445112155772348,0.343893304412691,0.0333661225791905,0.0790815411250237,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,0.0545136096208221,-0.029338595924336,-0.029338595924336,-0.00743746564235603,0.185943535039991,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,0.0303497408032525,0.107861515823049,-0.00930222278733605,0.0137807820244457,0.0838351559429901,0.0281553433013782,0.0189651514152216,0.125933429036908,-0.0131097690456796,-0.0133495376136837,-1.18471398161656e-05,-0.029338595924336,0.00180373472481807,-0.000452165798377617,-0.0007236010282239,-0.029338595924336,0.909077563742072,0.987709334420283,0.0283087087857475,-0.029338595924336,-0.029338595924336,-0.029338595924336,0.47143901855915,0.562504711176016,0.364093750252396,0.585372784879658,0.589042388287353,0.612616100370671,0.649567716925353,0.156556569993617,-0.013255639531387,-0.029338595924336,0.190474004169944,0.067184864004368,-0.00195616068066035,0.123700374267398,0.125677356324204,0.257398969777558,0.166423607471439,0.221793536109289,0.40835328834923,0.0557452816223808,0.0597258572482053,0.0646113394650125,0.0449215561290881,0.0963366941779456,0.0739382630228483,0.00915632127762658,0.0658854234439069,-0.029338595924336,-0.029338595924336,-0.029338595924336,0.0480877988198944,0.0244717925508207,-0.00707550538219757,0.00142142753955018,-0.00333572900701888,-0.00856982191875698,-0.029338595924336,-0.0121364485247275,-0.00535763211549127,0.0243363264277398,-0.00733344341013442,-0.0128201130461179,-0.0194618626981366,-0.029338595924336,-0.029338595924336,0.548368010793516,0.511624486711163,-0.029338595924336,-0.012354953358895,0.0908244651276922,0.0240450295578143,0.0380036156723242,0.00848830109257778,0.0263623397848605,-0.0167337131589891,-0.00122970650813552,0.0435245141034963,0.0193482363130773,0.00804199452017123,0.0202784149233908,0.0170753477724469,-0.0151747831476269,-0.0161935373872136,0.0498220684499635,0.0310091463422993,0.0799224988905089,0.0356430049172226,0.0250586589576889,0.0595767547098999,-0.011841829258102,-0.0193728659360801,-0.00140333826450902,-0.0133727929521085,-0.029338595924336,-0.00700085961829082,0.00764840682641525,-0.014657395726072,-0.0159694081093334,-0.0136996334140537,-0.0129195572566707,-0.029338595924336,-0.0184624849627247,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.000842236515528683,-0.029338595924336,0.0848615534003395,0.0308199487684814,0.0406741327912648,0.0290364552703569,0.00278549638703005,-0.0138826036275069,0.0332193587114912,0.00244725550317778,0.0854344560709571,0.0497389535531647,0.00216317825188612,-0.029338595924336,-0.0109463711845042,-0.029338595924336,-0.029338595924336,-0.000388562288874519,-0.0117004050800677,0.647220023207612,0.702873699471758,0.0672488332294038,0.0669993352374628,0.122661621922967,0.131636767303868,0.246783177327881,0.161473069247901,0.231909382639941,0.272054684052137,0.0811269466525391,0.214586755661037,0.169437811251454,0.506654809998854,0.14175760047295,0.149358567804271,0.242800805194066,0.21845599006299,-0.029338595924336,0.0703796016702301,0.0431309594084388,0.0188406343645771,0.0229835727344097,-0.0099352365943112,0.000818824351041983,-0.0068942816790907,-0.00726876946343602,0.00611802364553842,-0.029338595924336,-0.029338595924336,0.0328673162266948,0.0896955962593986,0.11460901869825,0.0902976055280647,0.066206091017622,0.169506875854317,0.189273231120766,0.220434188001904,-0.0140800131576708,0.0101364021229356,0.0115329018304536,-0.00870903770430708,0.0637607994771864,0.00439780437151332,0.00981776791316942,-0.0183376713304293,0.00390647071430198,0.748301270398466,0.0419888136036077,0.0713735478879112,0.00755622280559763,-0.0168467432979736,0.015976716078552,-0.029338595924336,-0.029338595924336,-0.0198575365549379,-0.029338595924336,0.0191736682150883,0.0820968392965703,0.0692972018262946,0.0503837521407555,0.0333904520879775,0.0254825340068036,-0.00289611494888087,0.0487013968990718,-0.029338595924336,-0.00556297015914575,-0.029338595924336,0.00301998323982048,0.0956713653493197,0.0815183007658139,0.124377720086175,0.0807525906341285,0.0706093490293955,0.117401185118712,0.0130247074752823,0.0186755286095603,-0.0136759043304221,0.0256243943610152,-0.029338595924336,-0.00470267377439333,0.0168054062070226,-0.020497260557421,-0.0174179894984196,-0.029338595924336,-0.0137455007436485,-0.029338595924336,-0.0154139009913941,-0.029338595924336,-0.0223854706756567,-0.029338595924336,-0.029338595924336,-0.029338595924336,-0.0145470755913795,-0.029338595924336,-0.0231198503669452,-0.0181052729490041,-0.00376877686912518,0.00801157827396222,0.0678004948642714,0.0105451821419021,-0.029338595924336,0.579567506532032,0.634676696413249,0.590957711308422,0.602633157743107,0.551951268651159,0.575449628499803,0.453465559630437,0.427844177561094,0.409786663833046,0.462486589996692,0.0544540252854211,0.110345311896798,0.0796187733132322,0.0991705030419251,0.0726396473722396,0.0944682059517533,0.0712366358193122,0.0989890580947301,0.0310995320723906,0.0945997188974944,0.0953274269516926,0.104686883165952,0.0636153029261923,0.0912738461706677,0.11394331809335,0.103682865777829,0.072913682574088,0.150654355874148,0.163623899568739,0.0956944164706401,0.102337362165956,0.0521139211907866,0.029843110360759,0.0407753366197772,0.0707206062192609,0.0654679919203019,0.0613731763036345,0.136194468564642,0.0769093153260194,0.0351422318913334,0.0846725802287029,0.125843387898335,0.13378911991832,0.0917583799019563,0.0637148893263052,0.29214196516619,0.031522130260694,0.0652800011749334,0.100895839283641,0.0573269690023518,0.0666472698240829
|coexpression_dpi_cluster_scores_median=0.104820993032756,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,0.270517320227071,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,0.072713448552626,0.0643258884483241,0.140289801435505,0.630101003516252,0.37198764146028,0.654141016922589,0.642036360954305,0.278372592177116,0.448284016967342,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,0.00102597125915671,0.031232104152838,-0.0158508717912236,0.3170704434252,0.248904210740183,0.148669886853261,0.103251713895832,0.23697042121115,0,0,0,0.734339671485599,0.905433539478067,0.232332108176943,0.30074044234148,0.37685976116206,0.477057103358911,0.584053319296741,0.249252244369345,0.296339834764305,0.243795179011321,0.462288281821181,0.65888686730635,0.653926303795756,0.311416268881173,0.351595143433643,0.310675246260747,0.612686472641609,0.530840682272246,0.563844407973212,0.401838853610536,0.434832876061132,0.339154078962242,0.022995428596148,0.065265127241279,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,0.0379048491486891,-0.0158508717912236,-0.0158508717912236,0,0.129583077907791,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,0.0387574542865943,0.10129095785621,0,0,0.0577162951573975,0.0292103181575154,0,0.128092844946393,0,-0.0158508717912236,0,-0.0158508717912236,0,0,0,-0.0158508717912236,0.960414821725887,1.03610100916584,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,0.494817970881938,0.625404404824607,0.378282604842893,0.67671276851821,0.571869288365403,0.728896988238055,0.710661244463855,0.123785952538405,-0.000437611457122289,-0.0158508717912236,0.240041736409749,0.0609382763731033,0,0.139417320970536,0.114728997702966,0.251000355032341,0.0966772685450544,0.235966703106261,0.43299816924643,0.0423896280848124,0.051742164417122,0.0519808003284744,0.0271858451235342,0.109962131462422,0,0,0.0235649256287302,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,0.0424232152158593,0,0,0,0,0,-0.0158508717912236,-0.0158508717912236,0,0.0503109412333985,0,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,0.599717018453339,0.490929680520078,-0.0158508717912236,0,0.10327865713505,0,0.036786730299288,0,0,-0.0108718323399284,0,0.0462478579610397,3.51601443973615e-07,0,0.0228096985062029,0,-0.0061950423058419,0,0.0211485237939723,0.0446996507586066,0,0.0167719142931789,0,0.0558336192684179,0,0,-0.0158508717912236,-0.00078907171928682,-0.0158508717912236,0,0,-0.00464288004117739,0,-0.0017695931051223,0,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,0.0595104389501553,0.0169324461202918,0.0181947428839066,0.0299281372366294,0,-0.00231850374548194,0.0615656019294911,0.0159349796362903,0.056144102712398,0.0524802872612471,0,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,0,0.716562631510655,0.753310583986794,0.0094859183620338,0,0.119093565942036,0.055725058609677,0.227353787569239,0.153805225105052,0.219097046593624,0.340066876774079,0.07380890348825,0.200327941254021,0.126496325705268,0.535121021102672,0.0183140110056789,0.114790150389705,0.241133379452703,0.0792225862684508,-0.0158508717912236,0.0709160425195844,0.0338810128175989,0,0,0,0,0,0,0,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,0.0960378128113193,0.130839711415496,0.0843392403965415,0.0368320748008241,0.143466312969664,0.176290607250522,0.183058686767218,-0.0158508717912236,-0.00696525972666535,0,0,0.0491550409879417,0,0,-0.0156837068542491,-0.0158508717912236,0.799669822932409,0.0107760673360548,0.0172648651893531,0,-0.0158508717912236,0.0119709555073834,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,0,0.0915691583880112,0.0401904713554668,0.0345310666150226,0.0177505732614364,0.0270374012584235,0,0.0568714860698839,-0.0158508717912236,0,-0.0158508717912236,-0.0158508717912236,0.0646158191928285,0.0794730163403007,0.0940691921745982,0.0581616843884121,0.0180482337405806,0.0540284218222196,0.00156922749005658,0,-0.0158508717912236,0.0314845549395361,-0.0158508717912236,0,0.0212308449966822,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,-0.0158508717912236,0,-0.010331752053153,0,0.0556072719610818,0,-0.0158508717912236,0.618838761439194,0.724114382125647,0.623647509045775,0.631240723484586,0.593580977069068,0.588545364325729,0.446165797915326,0.459206090835005,0.462558712550973,0.584357761656203,0.0568255748833091,0.129974564133617,0.073953862428197,0.101654555247277,0.0826465040380816,0.107657215326718,0.0622474723350795,0.0997572250619605,0.0445872562055031,0.0489230553888678,0.0822662945702844,0.0515669151698942,0.0541447364287854,0.0807746280420501,0.085727168524717,0.0970078478843999,0.0690741623162511,0.158803613210734,0.181984992055065,0.0727384725018882,0.0793472492838516,0.0474735570076093,0.0229583819569813,0.031933013947471,0.0732016744421266,0.0581069323452267,0.0729583017401753,0.119032330613901,0.0563499479641928,0,0.0782780136164006,0.143181393241831,0.125503766101229,0.0748405360908125,0.0698262658661869,0.330665030963901,0.0297946728475489,0.018786656918832,0.096663433439731,0.0306730602918824,0.074713244040664
|gostat_on_MCL_coexpression=GO:0000299;integral to membrane of membrane fraction;0.0394336841875496;170790!
|gostat_on_MCL_coexpression=GO:0000299;integral to membrane of membrane fraction;0.0394336841875496;170790!
}}
}}

Revision as of 12:55, 11 October 2012


Phase1 CAGE Peaks

 Short description
Mm9::chr12:73509649..73509660,-p5@Rtn1
Mm9::chr15:88809388..88809422,-p4@Mlc1
Mm9::chr7:31076790..31076798,+p5@Clip3
Mm9::chr7:31076822..31076826,+p7@Clip3
Mm9::chr7:31076935..31076958,+p2@Clip3
Mm9::chr7:31076960..31076987,+p4@Clip3


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

GO IDGO nameFDR corrected p-value
GO:0000299integral to membrane of membrane fraction0.0394336841875496



Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br>disease_data<br>

Cell Type
Ontology termp-valuen

Uber Anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MCL_coexpression_mm9:1330&oldid=2150616"