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MCL coexpression mm9:330: Difference between revisions

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|gostat_on_MCL_coexpression=GO:0021680;cerebellar Purkinje cell layer development;0.0115143358490151;77579,12286!GO:0021695;cerebellar cortex development;0.0115143358490151;77579,12286!GO:0022037;metencephalon development;0.0115143358490151;77579,12286!GO:0021549;cerebellum development;0.0115143358490151;77579,12286!GO:0050885;neuromuscular process controlling balance;0.0138358327149211;77579,12286!GO:0030902;hindbrain development;0.0138358327149211;77579,12286!GO:0050905;neuromuscular process;0.0138358327149211;77579,12286!GO:0030425;dendrite;0.0138358327149211;77579,12286!GO:0050793;regulation of developmental process;0.0138358327149211;66515,77579,12286!GO:0043025;cell soma;0.0138358327149211;77579,12286!GO:0021578;hindbrain maturation;0.0138358327149211;12286!GO:0021548;pons development;0.0138358327149211;12286!GO:0032353;negative regulation of hormone biosynthetic process;0.0138358327149211;12286!GO:0006930;substrate-bound cell migration, cell extension;0.0138358327149211;77579!GO:0048791;calcium ion-dependent exocytosis of neurotransmitter;0.0138358327149211;12286!GO:0021626;central nervous system maturation;0.0138358327149211;12286!GO:0021678;third ventricle development;0.0138358327149211;77579!GO:0021592;fourth ventricle development;0.0138358327149211;77579!GO:0032351;negative regulation of hormone metabolic process;0.0138358327149211;12286!GO:0021679;cerebellar molecular layer development;0.0138358327149211;12286!GO:0021590;cerebellum maturation;0.0138358327149211;12286!GO:0021750;vestibular nucleus development;0.0138358327149211;12286!GO:0044463;cell projection part;0.0177364098987912;77579,110084!GO:0046885;regulation of hormone biosynthetic process;0.0190185372696203;12286!GO:0021591;ventricular system development;0.0190185372696203;77579!GO:0021670;lateral ventricle development;0.0190185372696203;77579!GO:0050883;musculoskeletal movement, spinal reflex action;0.0190185372696203;12286!GO:0014056;regulation of acetylcholine secretion;0.0190185372696203;12286!GO:0043531;ADP binding;0.0190185372696203;77579!GO:0055015;ventricular cardiac muscle cell development;0.0190185372696203;77579!GO:0014051;gamma-aminobutyric acid secretion;0.0190185372696203;12286!GO:0014055;acetylcholine secretion;0.0190185372696203;12286!GO:0006887;exocytosis;0.0192529709852802;77579,12286!GO:0042995;cell projection;0.0206118188554981;77579,110084,12286!GO:0021700;developmental maturation;0.0207767562907057;77579,12286!GO:0030705;cytoskeleton-dependent intracellular transport;0.0217289218860015;77579,110084!GO:0055064;chloride ion homeostasis;0.0217289218860015;12286!GO:0030644;cellular chloride ion homeostasis;0.0217289218860015;12286!GO:0048857;neural nucleus development;0.0217289218860015;12286!GO:0007097;nuclear migration;0.0217289218860015;77579!GO:0032350;regulation of hormone metabolic process;0.0217289218860015;12286!GO:0000281;cytokinesis after mitosis;0.0217289218860015;77579!GO:0043005;neuron projection;0.0233933269220122;77579,12286!GO:0055083;monovalent inorganic anion homeostasis;0.0233933269220122;12286!GO:0033205;cytokinesis during cell cycle;0.0233933269220122;77579!GO:0055003;cardiac myofibril assembly;0.0233933269220122;77579!GO:0017158;regulation of calcium ion-dependent exocytosis;0.0233933269220122;12286!GO:0045601;regulation of endothelial cell differentiation;0.0233933269220122;66515!GO:0030898;actin-dependent ATPase activity;0.0233933269220122;77579!GO:0001778;plasma membrane repair;0.0233933269220122;77579!GO:0060024;rhythmic synaptic transmission;0.0233933269220122;12286!GO:0030320;cellular monovalent inorganic anion homeostasis;0.0233933269220122;12286!GO:0050881;musculoskeletal movement;0.0266685637761362;12286!GO:0006929;substrate-bound cell migration;0.0266685637761362;77579!GO:0000146;microfilament motor activity;0.0266685637761362;77579!GO:0048266;behavioral response to pain;0.0266685637761362;12286!GO:0050879;multicellular organismal movement;0.0266685637761362;12286!GO:0055012;ventricular cardiac muscle cell differentiation;0.0294125842816465;77579!GO:0040023;establishment of nucleus localization;0.0294125842816465;77579!GO:0055013;cardiac muscle cell development;0.0294125842816465;77579!GO:0051647;nucleus localization;0.0294125842816465;77579!GO:0008331;high voltage-gated calcium channel activity;0.0294125842816465;12286!GO:0007409;axonogenesis;0.0324521622352901;77579,12286!GO:0055081;anion homeostasis;0.0327210672450276;12286!GO:0030002;cellular anion homeostasis;0.0327210672450276;12286!GO:0048667;neuron morphogenesis during differentiation;0.0340857635744828;77579,12286!GO:0048812;neurite morphogenesis;0.0340857635744828;77579,12286!GO:0060004;reflex;0.0357349363514642;12286!GO:0045045;secretory pathway;0.0364386563812879;77579,12286!GO:0021692;cerebellar Purkinje cell layer morphogenesis;0.0364386563812879;12286!GO:0035249;synaptic transmission, glutamatergic;0.0364386563812879;12286!GO:0021694;cerebellar Purkinje cell layer formation;0.0364386563812879;12286!GO:0007512;adult heart development;0.0364386563812879;77579!GO:0060041;retina development in camera-type eye;0.0364386563812879;77579!GO:0021702;cerebellar Purkinje cell differentiation;0.0364386563812879;12286!GO:0007420;brain development;0.0370200017217645;77579,12286!GO:0000904;cellular morphogenesis during differentiation;0.0370200017217645;77579,12286!GO:0042403;thyroid hormone metabolic process;0.0370200017217645;12286!GO:0043197;dendritic spine;0.0370200017217645;77579!GO:0007009;plasma membrane organization and biogenesis;0.0370200017217645;77579!GO:0045446;endothelial cell differentiation;0.0370200017217645;66515!GO:0055007;cardiac muscle cell differentiation;0.0370200017217645;77579!GO:0031175;neurite development;0.0383700978135761;77579,12286!GO:0043113;receptor clustering;0.0383700978135761;12286!GO:0021697;cerebellar cortex formation;0.0383700978135761;12286!GO:0021533;cell differentiation in hindbrain;0.0383700978135761;12286!GO:0008417;fucosyltransferase activity;0.0383700978135761;171167!GO:0032940;secretion by cell;0.0404508270494897;77579,12286!GO:0048265;response to pain;0.0404508270494897;12286!GO:0005858;axonemal dynein complex;0.0404508270494897;110084!GO:0031594;neuromuscular junction;0.0419443405874678;77579!GO:0007274;neuromuscular synaptic transmission;0.0419443405874678;12286!GO:0007172;signal complex assembly;0.0419443405874678;12286!GO:0048813;dendrite morphogenesis;0.0419443405874678;12286!GO:0048666;neuron development;0.0422104579164527;77579,12286!GO:0030239;myofibril assembly;0.042488017382512;77579!GO:0005891;voltage-gated calcium channel complex;0.042488017382512;12286!GO:0055002;striated muscle cell development;0.042488017382512;77579!GO:0021696;cerebellar cortex morphogenesis;0.042488017382512;12286!GO:0007417;central nervous system development;0.042488017382512;77579,12286!GO:0044447;axoneme part;0.042488017382512;110084!GO:0021587;cerebellum morphogenesis;0.042488017382512;12286!GO:0035051;cardiac cell differentiation;0.042488017382512;77579!GO:0030427;site of polarized growth;0.042488017382512;77579!GO:0030048;actin filament-based movement;0.042488017382512;77579!GO:0030426;growth cone;0.042488017382512;77579!GO:0055001;muscle cell development;0.042488017382512;77579!GO:0051649;establishment of cellular localization;0.042488017382512;77579,110084,12286!GO:0051641;cellular localization;0.0436779792210924;77579,110084,12286!GO:0021575;hindbrain morphogenesis;0.0436779792210924;12286!GO:0000096;sulfur amino acid metabolic process;0.0436779792210924;12286!GO:0006950;response to stress;0.0451729903323541;77579,110084,12286!GO:0007204;elevation of cytosolic calcium ion concentration;0.0451729903323541;12286!GO:0051899;membrane depolarization;0.0451729903323541;12286!GO:0007416;synaptogenesis;0.0465897799802007;12286!GO:0046928;regulation of neurotransmitter secretion;0.0465897799802007;12286!GO:0017157;regulation of exocytosis;0.0465897799802007;12286!GO:0046903;secretion;0.0469226809493046;77579,12286!GO:0001725;stress fiber;0.0469226809493046;77579!GO:0007214;gamma-aminobutyric acid signaling pathway;0.0469226809493046;12286!GO:0031032;actomyosin structure organization and biogenesis;0.0469226809493046;77579!GO:0051480;cytosolic calcium ion homeostasis;0.0469226809493046;12286!GO:0032990;cell part morphogenesis;0.0469226809493046;77579,12286!GO:0048858;cell projection morphogenesis;0.0469226809493046;77579,12286!GO:0030030;cell projection organization and biogenesis;0.0469226809493046;77579,12286!GO:0017156;calcium ion-dependent exocytosis;0.0469226809493046;12286!GO:0032432;actin filament bundle;0.0469226809493046;77579!GO:0050804;regulation of synaptic transmission;0.0469226809493046;12286!GO:0051969;regulation of transmission of nerve impulse;0.0469226809493046;12286!GO:0030182;neuron differentiation;0.047772663659699;77579,12286!GO:0048628;myoblast maturation;0.047772663659699;77579!GO:0051656;establishment of organelle localization;0.047772663659699;77579!GO:0005245;voltage-gated calcium channel activity;0.047772663659699;12286!GO:0005930;axoneme;0.048928832684291;110084!GO:0007628;adult walking behavior;0.048928832684291;12286!GO:0048627;myoblast development;0.048928832684291;77579!GO:0015630;microtubule cytoskeleton;0.0491975845702045;77579,110084!GO:0043234;protein complex;0.0496764062639832;77579,110084,22601,12286!GO:0043524;negative regulation of neuron apoptosis;0.0496764062639832;12286!GO:0021537;telencephalon development;0.0496764062639832;77579!
|gostat_on_MCL_coexpression=GO:0021680;cerebellar Purkinje cell layer development;0.0115143358490151;77579,12286!GO:0021695;cerebellar cortex development;0.0115143358490151;77579,12286!GO:0022037;metencephalon development;0.0115143358490151;77579,12286!GO:0021549;cerebellum development;0.0115143358490151;77579,12286!GO:0050885;neuromuscular process controlling balance;0.0138358327149211;77579,12286!GO:0030902;hindbrain development;0.0138358327149211;77579,12286!GO:0050905;neuromuscular process;0.0138358327149211;77579,12286!GO:0030425;dendrite;0.0138358327149211;77579,12286!GO:0050793;regulation of developmental process;0.0138358327149211;66515,77579,12286!GO:0043025;cell soma;0.0138358327149211;77579,12286!GO:0021578;hindbrain maturation;0.0138358327149211;12286!GO:0021548;pons development;0.0138358327149211;12286!GO:0032353;negative regulation of hormone biosynthetic process;0.0138358327149211;12286!GO:0006930;substrate-bound cell migration, cell extension;0.0138358327149211;77579!GO:0048791;calcium ion-dependent exocytosis of neurotransmitter;0.0138358327149211;12286!GO:0021626;central nervous system maturation;0.0138358327149211;12286!GO:0021678;third ventricle development;0.0138358327149211;77579!GO:0021592;fourth ventricle development;0.0138358327149211;77579!GO:0032351;negative regulation of hormone metabolic process;0.0138358327149211;12286!GO:0021679;cerebellar molecular layer development;0.0138358327149211;12286!GO:0021590;cerebellum maturation;0.0138358327149211;12286!GO:0021750;vestibular nucleus development;0.0138358327149211;12286!GO:0044463;cell projection part;0.0177364098987912;77579,110084!GO:0046885;regulation of hormone biosynthetic process;0.0190185372696203;12286!GO:0021591;ventricular system development;0.0190185372696203;77579!GO:0021670;lateral ventricle development;0.0190185372696203;77579!GO:0050883;musculoskeletal movement, spinal reflex action;0.0190185372696203;12286!GO:0014056;regulation of acetylcholine secretion;0.0190185372696203;12286!GO:0043531;ADP binding;0.0190185372696203;77579!GO:0055015;ventricular cardiac muscle cell development;0.0190185372696203;77579!GO:0014051;gamma-aminobutyric acid secretion;0.0190185372696203;12286!GO:0014055;acetylcholine secretion;0.0190185372696203;12286!GO:0006887;exocytosis;0.0192529709852802;77579,12286!GO:0042995;cell projection;0.0206118188554981;77579,110084,12286!GO:0021700;developmental maturation;0.0207767562907057;77579,12286!GO:0030705;cytoskeleton-dependent intracellular transport;0.0217289218860015;77579,110084!GO:0055064;chloride ion homeostasis;0.0217289218860015;12286!GO:0030644;cellular chloride ion homeostasis;0.0217289218860015;12286!GO:0048857;neural nucleus development;0.0217289218860015;12286!GO:0007097;nuclear migration;0.0217289218860015;77579!GO:0032350;regulation of hormone metabolic process;0.0217289218860015;12286!GO:0000281;cytokinesis after mitosis;0.0217289218860015;77579!GO:0043005;neuron projection;0.0233933269220122;77579,12286!GO:0055083;monovalent inorganic anion homeostasis;0.0233933269220122;12286!GO:0033205;cytokinesis during cell cycle;0.0233933269220122;77579!GO:0055003;cardiac myofibril assembly;0.0233933269220122;77579!GO:0017158;regulation of calcium ion-dependent exocytosis;0.0233933269220122;12286!GO:0045601;regulation of endothelial cell differentiation;0.0233933269220122;66515!GO:0030898;actin-dependent ATPase activity;0.0233933269220122;77579!GO:0001778;plasma membrane repair;0.0233933269220122;77579!GO:0060024;rhythmic synaptic transmission;0.0233933269220122;12286!GO:0030320;cellular monovalent inorganic anion homeostasis;0.0233933269220122;12286!GO:0050881;musculoskeletal movement;0.0266685637761362;12286!GO:0006929;substrate-bound cell migration;0.0266685637761362;77579!GO:0000146;microfilament motor activity;0.0266685637761362;77579!GO:0048266;behavioral response to pain;0.0266685637761362;12286!GO:0050879;multicellular organismal movement;0.0266685637761362;12286!GO:0055012;ventricular cardiac muscle cell differentiation;0.0294125842816465;77579!GO:0040023;establishment of nucleus localization;0.0294125842816465;77579!GO:0055013;cardiac muscle cell development;0.0294125842816465;77579!GO:0051647;nucleus localization;0.0294125842816465;77579!GO:0008331;high voltage-gated calcium channel activity;0.0294125842816465;12286!GO:0007409;axonogenesis;0.0324521622352901;77579,12286!GO:0055081;anion homeostasis;0.0327210672450276;12286!GO:0030002;cellular anion homeostasis;0.0327210672450276;12286!GO:0048667;neuron morphogenesis during differentiation;0.0340857635744828;77579,12286!GO:0048812;neurite morphogenesis;0.0340857635744828;77579,12286!GO:0060004;reflex;0.0357349363514642;12286!GO:0045045;secretory pathway;0.0364386563812879;77579,12286!GO:0021692;cerebellar Purkinje cell layer morphogenesis;0.0364386563812879;12286!GO:0035249;synaptic transmission, glutamatergic;0.0364386563812879;12286!GO:0021694;cerebellar Purkinje cell layer formation;0.0364386563812879;12286!GO:0007512;adult heart development;0.0364386563812879;77579!GO:0060041;retina development in camera-type eye;0.0364386563812879;77579!GO:0021702;cerebellar Purkinje cell differentiation;0.0364386563812879;12286!GO:0007420;brain development;0.0370200017217645;77579,12286!GO:0000904;cellular morphogenesis during differentiation;0.0370200017217645;77579,12286!GO:0042403;thyroid hormone metabolic process;0.0370200017217645;12286!GO:0043197;dendritic spine;0.0370200017217645;77579!GO:0007009;plasma membrane organization and biogenesis;0.0370200017217645;77579!GO:0045446;endothelial cell differentiation;0.0370200017217645;66515!GO:0055007;cardiac muscle cell differentiation;0.0370200017217645;77579!GO:0031175;neurite development;0.0383700978135761;77579,12286!GO:0043113;receptor clustering;0.0383700978135761;12286!GO:0021697;cerebellar cortex formation;0.0383700978135761;12286!GO:0021533;cell differentiation in hindbrain;0.0383700978135761;12286!GO:0008417;fucosyltransferase activity;0.0383700978135761;171167!GO:0032940;secretion by cell;0.0404508270494897;77579,12286!GO:0048265;response to pain;0.0404508270494897;12286!GO:0005858;axonemal dynein complex;0.0404508270494897;110084!GO:0031594;neuromuscular junction;0.0419443405874678;77579!GO:0007274;neuromuscular synaptic transmission;0.0419443405874678;12286!GO:0007172;signal complex assembly;0.0419443405874678;12286!GO:0048813;dendrite morphogenesis;0.0419443405874678;12286!GO:0048666;neuron development;0.0422104579164527;77579,12286!GO:0030239;myofibril assembly;0.042488017382512;77579!GO:0005891;voltage-gated calcium channel complex;0.042488017382512;12286!GO:0055002;striated muscle cell development;0.042488017382512;77579!GO:0021696;cerebellar cortex morphogenesis;0.042488017382512;12286!GO:0007417;central nervous system development;0.042488017382512;77579,12286!GO:0044447;axoneme part;0.042488017382512;110084!GO:0021587;cerebellum morphogenesis;0.042488017382512;12286!GO:0035051;cardiac cell differentiation;0.042488017382512;77579!GO:0030427;site of polarized growth;0.042488017382512;77579!GO:0030048;actin filament-based movement;0.042488017382512;77579!GO:0030426;growth cone;0.042488017382512;77579!GO:0055001;muscle cell development;0.042488017382512;77579!GO:0051649;establishment of cellular localization;0.042488017382512;77579,110084,12286!GO:0051641;cellular localization;0.0436779792210924;77579,110084,12286!GO:0021575;hindbrain morphogenesis;0.0436779792210924;12286!GO:0000096;sulfur amino acid metabolic process;0.0436779792210924;12286!GO:0006950;response to stress;0.0451729903323541;77579,110084,12286!GO:0007204;elevation of cytosolic calcium ion concentration;0.0451729903323541;12286!GO:0051899;membrane depolarization;0.0451729903323541;12286!GO:0007416;synaptogenesis;0.0465897799802007;12286!GO:0046928;regulation of neurotransmitter secretion;0.0465897799802007;12286!GO:0017157;regulation of exocytosis;0.0465897799802007;12286!GO:0046903;secretion;0.0469226809493046;77579,12286!GO:0001725;stress fiber;0.0469226809493046;77579!GO:0007214;gamma-aminobutyric acid signaling pathway;0.0469226809493046;12286!GO:0031032;actomyosin structure organization and biogenesis;0.0469226809493046;77579!GO:0051480;cytosolic calcium ion homeostasis;0.0469226809493046;12286!GO:0032990;cell part morphogenesis;0.0469226809493046;77579,12286!GO:0048858;cell projection morphogenesis;0.0469226809493046;77579,12286!GO:0030030;cell projection organization and biogenesis;0.0469226809493046;77579,12286!GO:0017156;calcium ion-dependent exocytosis;0.0469226809493046;12286!GO:0032432;actin filament bundle;0.0469226809493046;77579!GO:0050804;regulation of synaptic transmission;0.0469226809493046;12286!GO:0051969;regulation of transmission of nerve impulse;0.0469226809493046;12286!GO:0030182;neuron differentiation;0.047772663659699;77579,12286!GO:0048628;myoblast maturation;0.047772663659699;77579!GO:0051656;establishment of organelle localization;0.047772663659699;77579!GO:0005245;voltage-gated calcium channel activity;0.047772663659699;12286!GO:0005930;axoneme;0.048928832684291;110084!GO:0007628;adult walking behavior;0.048928832684291;12286!GO:0048627;myoblast development;0.048928832684291;77579!GO:0015630;microtubule cytoskeleton;0.0491975845702045;77579,110084!GO:0043234;protein complex;0.0496764062639832;77579,110084,22601,12286!GO:0043524;negative regulation of neuron apoptosis;0.0496764062639832;12286!GO:0021537;telencephalon development;0.0496764062639832;77579!
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_uberon=UBERON:0000468!9.09e-09!333;UBERON:0000922!4.06e-07!320
}}
}}

Revision as of 19:50, 11 October 2012


Phase1 CAGE Peaks

 Short description
Mm9::chr10:79482366..79482435,+p3@Hmha1
Mm9::chr11:68505599..68505628,+p1@Myh10
Mm9::chr14:32082684..32082746,-p1@Dnahc1
Mm9::chr14:56472962..56473043,+p1@Nynrin
Mm9::chr15:26825333..26825340,-p2@Fbxl7
Mm9::chr17:46787557..46787583,+p1@Cul7
Mm9::chr17:46787591..46787610,+p2@Cul7
Mm9::chr2:152240475..152240491,-p@chr2:152240475..152240491
-
Mm9::chr2:152240508..152240545,-p1@Zcchc3
Mm9::chr2:152240554..152240570,-p3@Zcchc3
Mm9::chr2:152240575..152240597,-p2@Zcchc3
Mm9::chr2:153172121..153172156,-p1@ENSMUST00000139636
Mm9::chr2:156665526..156665594,-p1@ENSMUST00000134838
p1@ENSMUST00000137463
Mm9::chr3:46251861..46251902,-p1@Pabpc4l
Mm9::chr5:37729838..37729858,+p2@Evc2
Mm9::chr6:38249236..38249290,-p1@Zc3hav1l
Mm9::chr6:48395825..48395846,-p3@Zfp467
Mm9::chr7:25084406..25084425,-p3@Zfp61
Mm9::chr7:69608158..69608162,-p@chr7:69608158..69608162
-
Mm9::chr8:32297789..32297829,+p1@Fut10
Mm9::chr8:87162861..87162916,+p1@Cacna1a
Mm9::chr9:72772890..72772904,+p@chr9:72772890..72772904
+
Mm9::chr9:8004414..8004436,-p4@Yap1
Mm9::chrX:157600676..157600707,+p1@Scml2


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

GO IDGO nameFDR corrected p-value
GO:0021680cerebellar Purkinje cell layer development0.0115143358490151
GO:0021695cerebellar cortex development0.0115143358490151
GO:0022037metencephalon development0.0115143358490151
GO:0021549cerebellum development0.0115143358490151
GO:0050885neuromuscular process controlling balance0.0138358327149211
GO:0030902hindbrain development0.0138358327149211
GO:0050905neuromuscular process0.0138358327149211
GO:0030425dendrite0.0138358327149211
GO:0050793regulation of developmental process0.0138358327149211
GO:0043025cell soma0.0138358327149211
GO:0021578hindbrain maturation0.0138358327149211
GO:0021548pons development0.0138358327149211
GO:0032353negative regulation of hormone biosynthetic process0.0138358327149211
GO:0006930substrate-bound cell migration, cell extension0.0138358327149211
GO:0048791calcium ion-dependent exocytosis of neurotransmitter0.0138358327149211
GO:0021626central nervous system maturation0.0138358327149211
GO:0021678third ventricle development0.0138358327149211
GO:0021592fourth ventricle development0.0138358327149211
GO:0032351negative regulation of hormone metabolic process0.0138358327149211
GO:0021679cerebellar molecular layer development0.0138358327149211
GO:0021590cerebellum maturation0.0138358327149211
GO:0021750vestibular nucleus development0.0138358327149211
GO:0044463cell projection part0.0177364098987912
GO:0046885regulation of hormone biosynthetic process0.0190185372696203
GO:0021591ventricular system development0.0190185372696203
GO:0021670lateral ventricle development0.0190185372696203
GO:0050883musculoskeletal movement, spinal reflex action0.0190185372696203
GO:0014056regulation of acetylcholine secretion0.0190185372696203
GO:0043531ADP binding0.0190185372696203
GO:0055015ventricular cardiac muscle cell development0.0190185372696203
GO:0014051gamma-aminobutyric acid secretion0.0190185372696203
GO:0014055acetylcholine secretion0.0190185372696203
GO:0006887exocytosis0.0192529709852802
GO:0042995cell projection0.0206118188554981
GO:0021700developmental maturation0.0207767562907057
GO:0030705cytoskeleton-dependent intracellular transport0.0217289218860015
GO:0055064chloride ion homeostasis0.0217289218860015
GO:0030644cellular chloride ion homeostasis0.0217289218860015
GO:0048857neural nucleus development0.0217289218860015
GO:0007097nuclear migration0.0217289218860015
GO:0032350regulation of hormone metabolic process0.0217289218860015
GO:0000281cytokinesis after mitosis0.0217289218860015
GO:0043005neuron projection0.0233933269220122
GO:0055083monovalent inorganic anion homeostasis0.0233933269220122
GO:0033205cytokinesis during cell cycle0.0233933269220122
GO:0055003cardiac myofibril assembly0.0233933269220122
GO:0017158regulation of calcium ion-dependent exocytosis0.0233933269220122
GO:0045601regulation of endothelial cell differentiation0.0233933269220122
GO:0030898actin-dependent ATPase activity0.0233933269220122
GO:0001778plasma membrane repair0.0233933269220122
GO:0060024rhythmic synaptic transmission0.0233933269220122
GO:0030320cellular monovalent inorganic anion homeostasis0.0233933269220122
GO:0050881musculoskeletal movement0.0266685637761362
GO:0006929substrate-bound cell migration0.0266685637761362
GO:0000146microfilament motor activity0.0266685637761362
GO:0048266behavioral response to pain0.0266685637761362
GO:0050879multicellular organismal movement0.0266685637761362
GO:0055012ventricular cardiac muscle cell differentiation0.0294125842816465
GO:0040023establishment of nucleus localization0.0294125842816465
GO:0055013cardiac muscle cell development0.0294125842816465
GO:0051647nucleus localization0.0294125842816465
GO:0008331high voltage-gated calcium channel activity0.0294125842816465
GO:0007409axonogenesis0.0324521622352901
GO:0055081anion homeostasis0.0327210672450276
GO:0030002cellular anion homeostasis0.0327210672450276
GO:0048667neuron morphogenesis during differentiation0.0340857635744828
GO:0048812neurite morphogenesis0.0340857635744828
GO:0060004reflex0.0357349363514642
GO:0045045secretory pathway0.0364386563812879
GO:0021692cerebellar Purkinje cell layer morphogenesis0.0364386563812879
GO:0035249synaptic transmission, glutamatergic0.0364386563812879
GO:0021694cerebellar Purkinje cell layer formation0.0364386563812879
GO:0007512adult heart development0.0364386563812879
GO:0060041retina development in camera-type eye0.0364386563812879
GO:0021702cerebellar Purkinje cell differentiation0.0364386563812879
GO:0007420brain development0.0370200017217645
GO:0000904cellular morphogenesis during differentiation0.0370200017217645
GO:0042403thyroid hormone metabolic process0.0370200017217645
GO:0043197dendritic spine0.0370200017217645
GO:0007009plasma membrane organization and biogenesis0.0370200017217645
GO:0045446endothelial cell differentiation0.0370200017217645
GO:0055007cardiac muscle cell differentiation0.0370200017217645
GO:0031175neurite development0.0383700978135761
GO:0043113receptor clustering0.0383700978135761
GO:0021697cerebellar cortex formation0.0383700978135761
GO:0021533cell differentiation in hindbrain0.0383700978135761
GO:0008417fucosyltransferase activity0.0383700978135761
GO:0032940secretion by cell0.0404508270494897
GO:0048265response to pain0.0404508270494897
GO:0005858axonemal dynein complex0.0404508270494897
GO:0031594neuromuscular junction0.0419443405874678
GO:0007274neuromuscular synaptic transmission0.0419443405874678
GO:0007172signal complex assembly0.0419443405874678
GO:0048813dendrite morphogenesis0.0419443405874678
GO:0048666neuron development0.0422104579164527
GO:0030239myofibril assembly0.042488017382512
GO:0005891voltage-gated calcium channel complex0.042488017382512
GO:0055002striated muscle cell development0.042488017382512
GO:0021696cerebellar cortex morphogenesis0.042488017382512
GO:0007417central nervous system development0.042488017382512
GO:0044447axoneme part0.042488017382512
GO:0021587cerebellum morphogenesis0.042488017382512
GO:0035051cardiac cell differentiation0.042488017382512
GO:0030427site of polarized growth0.042488017382512
GO:0030048actin filament-based movement0.042488017382512
GO:0030426growth cone0.042488017382512
GO:0055001muscle cell development0.042488017382512
GO:0051649establishment of cellular localization0.042488017382512
GO:0051641cellular localization0.0436779792210924
GO:0021575hindbrain morphogenesis0.0436779792210924
GO:0000096sulfur amino acid metabolic process0.0436779792210924
GO:0006950response to stress0.0451729903323541
GO:0007204elevation of cytosolic calcium ion concentration0.0451729903323541
GO:0051899membrane depolarization0.0451729903323541
GO:0007416synaptogenesis0.0465897799802007
GO:0046928regulation of neurotransmitter secretion0.0465897799802007
GO:0017157regulation of exocytosis0.0465897799802007
GO:0046903secretion0.0469226809493046
GO:0001725stress fiber0.0469226809493046
GO:0007214gamma-aminobutyric acid signaling pathway0.0469226809493046
GO:0031032actomyosin structure organization and biogenesis0.0469226809493046
GO:0051480cytosolic calcium ion homeostasis0.0469226809493046
GO:0032990cell part morphogenesis0.0469226809493046
GO:0048858cell projection morphogenesis0.0469226809493046
GO:0030030cell projection organization and biogenesis0.0469226809493046
GO:0017156calcium ion-dependent exocytosis0.0469226809493046
GO:0032432actin filament bundle0.0469226809493046
GO:0050804regulation of synaptic transmission0.0469226809493046
GO:0051969regulation of transmission of nerve impulse0.0469226809493046
GO:0030182neuron differentiation0.047772663659699
GO:0048628myoblast maturation0.047772663659699
GO:0051656establishment of organelle localization0.047772663659699
GO:0005245voltage-gated calcium channel activity0.047772663659699
GO:0005930axoneme0.048928832684291
GO:0007628adult walking behavior0.048928832684291
GO:0048627myoblast development0.048928832684291
GO:0015630microtubule cytoskeleton0.0491975845702045
GO:0043234protein complex0.0496764062639832
GO:0043524negative regulation of neuron apoptosis0.0496764062639832
GO:0021537telencephalon development0.0496764062639832



Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br><br>uberon_data<br><br>

Uber Anatomy
Ontology termp-valuen
multi-cellular organism9.09e-09333
embryo4.06e-07320


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}

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