FFCP PHASE1:Mm9::chr8:85982305..85982316,-: Difference between revisions
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|id=chr8:85982305..85982316,- | |id=chr8:85982305..85982316,- | ||
|ontology_enrichment_celltype=CL:0000075!8.57e-09!7;CL:0002563!5.08e-08!9;CL:0002251!5.08e-08!9;CL:0000239!6.14e-08!6;CL:0000677!6.14e-08!6;CL:0000212!6.14e-08!6;CL:0000584!6.14e-08!6 | |ontology_enrichment_celltype=CL:0000075!8.57e-09!7;CL:0002563!5.08e-08!9;CL:0002251!5.08e-08!9;CL:0000239!6.14e-08!6;CL:0000677!6.14e-08!6;CL:0000212!6.14e-08!6;CL:0000584!6.14e-08!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.97e-08,6;CL:0000677,1.97e-08,6;CL:0000584,1.97e-08,6;CL:0000075,3.13e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.82e-20!43;UBERON:0005409!1.40e-16!59;UBERON:0000344!1.16e-14!15;UBERON:0001242!3.27e-12!13;UBERON:0000060!3.27e-12!13;UBERON:0001262!3.27e-12!13;UBERON:0004786!3.27e-12!13;UBERON:0000485!6.23e-10!11;UBERON:0002113!2.17e-09!14;UBERON:0003918!2.17e-09!14;UBERON:0005095!2.17e-09!14;UBERON:0007687!2.17e-09!14;UBERON:0003350!5.08e-08!9;UBERON:0004808!5.08e-08!9;UBERON:0001277!5.08e-08!9;UBERON:0006554!7.32e-08!16;UBERON:0004923!1.10e-07!24;UBERON:0001008!3.08e-07!17 | |ontology_enrichment_uberon=UBERON:0000160!3.82e-20!43;UBERON:0005409!1.40e-16!59;UBERON:0000344!1.16e-14!15;UBERON:0001242!3.27e-12!13;UBERON:0000060!3.27e-12!13;UBERON:0001262!3.27e-12!13;UBERON:0004786!3.27e-12!13;UBERON:0000485!6.23e-10!11;UBERON:0002113!2.17e-09!14;UBERON:0003918!2.17e-09!14;UBERON:0005095!2.17e-09!14;UBERON:0007687!2.17e-09!14;UBERON:0003350!5.08e-08!9;UBERON:0004808!5.08e-08!9;UBERON:0001277!5.08e-08!9;UBERON:0006554!7.32e-08!16;UBERON:0004923!1.10e-07!24;UBERON:0001008!3.08e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.33e-35,31;UBERON:0005409,4.64e-22,47;UBERON:0000344,2.17e-09,15;UBERON:0001007,2.43e-08,116;UBERON:0001555,2.43e-08,116;UBERON:0007026,2.43e-08,116;UBERON:0004119,4.02e-08,118;UBERON:0000925,4.02e-08,118;UBERON:0006595,4.02e-08,118;UBERON:0002113,2.71e-07,14;UBERON:0003918,2.71e-07,14;UBERON:0011143,2.71e-07,14;UBERON:0005095,2.71e-07,14;UBERON:0007687,2.71e-07,14;UBERON:0001962,4.47e-07,2;UBERON:0001961,4.47e-07,2;UBERON:0001744,4.47e-07,2;UBERON:0001155,4.79e-07,2;UBERON:0000059,4.79e-07,2 | |||
|phase1_expression=1.28119077683835,3.48975407639361,2.27499619694768,3.62957053568196,3.00537437967808,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,3.03985603307473,2.75291137280604,0.57423196411502,0.86152399231815,0.861884930743556,0.570070258369122,0.504060259519861,0.665191531965914,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.422530259330042,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,4.85368404896324,0,0,0,0,0,0,0,0.255715457330331,0,0,0.305518091550949,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8950761874167,1.32225283331772,0,0,0.257734922644187,2.01683524623343,2.2237804384487,1.71203063501303,9.96511029243474,2.79988223030818,1.75934646160189,2.18852119245266,2.72949721966768,8.08937467788799,4.32276099749388,3.58454291857861,0,0.342745537829186,1.1270773567308,0.407302655690628,0.581857461502877,1.05203729835478,2.46622494784603,4.87113488332687,5.65195420228949,6.66344685177723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.37221254944776,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432021363287205,0.209088296014469,0.436725127492355,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.192075457214608,0.287177344778066,0.952587382566147,0.115884325944855,0,0,0,0.342869252385415,0.354951612318675,0.476872379894642,0,0.0941093804153306,0,0,0,0.135804113845862,0,0.118635018124174,0.29551344712669,0,0.154936841185966,0.385813221962283,0,0,0,0,0,0 | |phase1_expression=1.28119077683835,3.48975407639361,2.27499619694768,3.62957053568196,3.00537437967808,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,3.03985603307473,2.75291137280604,0.57423196411502,0.86152399231815,0.861884930743556,0.570070258369122,0.504060259519861,0.665191531965914,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.422530259330042,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,4.85368404896324,0,0,0,0,0,0,0,0.255715457330331,0,0,0.305518091550949,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8950761874167,1.32225283331772,0,0,0.257734922644187,2.01683524623343,2.2237804384487,1.71203063501303,9.96511029243474,2.79988223030818,1.75934646160189,2.18852119245266,2.72949721966768,8.08937467788799,4.32276099749388,3.58454291857861,0,0.342745537829186,1.1270773567308,0.407302655690628,0.581857461502877,1.05203729835478,2.46622494784603,4.87113488332687,5.65195420228949,6.66344685177723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.37221254944776,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432021363287205,0.209088296014469,0.436725127492355,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.192075457214608,0.287177344778066,0.952587382566147,0.115884325944855,0,0,0,0.342869252385415,0.354951612318675,0.476872379894642,0,0.0941093804153306,0,0,0,0.135804113845862,0,0.118635018124174,0.29551344712669,0,0.154936841185966,0.385813221962283,0,0,0,0,0,0 | ||
|short_description=p9@LOC100505320,p9@Scoc | |short_description=p9@LOC100505320,p9@Scoc | ||
}} | }} |
Revision as of 11:53, 13 November 2012
Short description: | p9@LOC100505320, p9@Scoc |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_LOC100505320_5end, CAGE_peak_9_at_Scoc_5end |
Coexpression cluster: | MCL_coexpression_mm9:727 |
Association with transcript: | -15bp_to_ENSMUST00000081506, NM_001039137, uc009mkh.1_5end |
EntrezGene: | 100505320,56367 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.97e-08 | 6 |
gut absorptive cell | 1.97e-08 | 6 |
enterocyte | 1.97e-08 | 6 |
columnar/cuboidal epithelial cell | 3.13e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.33e-35 | 31 |
gastrointestinal system | 4.64e-22 | 47 |
mucosa | 2.17e-09 | 15 |
digestive system | 2.43e-08 | 116 |
digestive tract | 2.43e-08 | 116 |
primitive gut | 2.43e-08 | 116 |
endoderm-derived structure | 4.02e-08 | 118 |
endoderm | 4.02e-08 | 118 |
presumptive endoderm | 4.02e-08 | 118 |
kidney | 2.71e-07 | 14 |
kidney mesenchyme | 2.71e-07 | 14 |
upper urinary tract | 2.71e-07 | 14 |
kidney rudiment | 2.71e-07 | 14 |
kidney field | 2.71e-07 | 14 |
gut-associated lymphoid tissue | 4.47e-07 | 2 |
mucosa-associated lymphoid tissue | 4.47e-07 | 2 |
lymphoid tissue | 4.47e-07 | 2 |
colon | 4.79e-07 | 2 |
large intestine | 4.79e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.