FFCP PHASE1:Mm9::chr18:43367364..43367375,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr18:43367364..43367375,+ | |id=chr18:43367364..43367375,+ | ||
|ontology_enrichment_celltype=CL:0000221!9.20e-15!44;CL:0000133!9.20e-15!44;CL:0002319!1.44e-14!43;CL:0000540!4.21e-11!33;CL:0000047!4.21e-11!33;CL:0000031!4.21e-11!33;CL:0000404!4.21e-11!33;CL:0000055!8.50e-11!50;CL:0000107!7.91e-10!9;CL:0000393!5.22e-08!39;CL:0000211!5.22e-08!39 | |ontology_enrichment_celltype=CL:0000221!9.20e-15!44;CL:0000133!9.20e-15!44;CL:0002319!1.44e-14!43;CL:0000540!4.21e-11!33;CL:0000047!4.21e-11!33;CL:0000031!4.21e-11!33;CL:0000404!4.21e-11!33;CL:0000055!8.50e-11!50;CL:0000107!7.91e-10!9;CL:0000393!5.22e-08!39;CL:0000211!5.22e-08!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000107,2.32e-37,9;CL:0002319,2.88e-14,43;CL:0000221,6.85e-14,44;CL:0000133,6.85e-14,44;CL:0000540,3.41e-09,33;CL:0000047,3.41e-09,33;CL:0000031,3.41e-09,33;CL:0000404,3.41e-09,33;CL:0002453,3.46e-08,8;CL:0002321,7.12e-08,70;CL:0000393,1.46e-07,39;CL:0000211,1.46e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.55e-21!102;UBERON:0000924!2.55e-21!102;UBERON:0006601!2.55e-21!102;UBERON:0000073!4.06e-19!75;UBERON:0001016!4.06e-19!75;UBERON:0001017!1.37e-18!73;UBERON:0005743!1.37e-18!73;UBERON:0002346!3.98e-16!71;UBERON:0003075!3.98e-16!71;UBERON:0007284!3.98e-16!71;UBERON:0002410!7.91e-10!9;UBERON:0000010!9.14e-10!11;UBERON:0001049!2.62e-09!52;UBERON:0005068!2.62e-09!52;UBERON:0006241!2.62e-09!52;UBERON:0007135!2.62e-09!52;UBERON:0003056!1.11e-08!49;UBERON:0000033!1.78e-08!63;UBERON:0002616!8.70e-08!49;UBERON:0000955!1.94e-07!50;UBERON:0006238!1.94e-07!50;UBERON:0003080!7.59e-07!40 | |ontology_enrichment_uberon=UBERON:0004121!2.55e-21!102;UBERON:0000924!2.55e-21!102;UBERON:0006601!2.55e-21!102;UBERON:0000073!4.06e-19!75;UBERON:0001016!4.06e-19!75;UBERON:0001017!1.37e-18!73;UBERON:0005743!1.37e-18!73;UBERON:0002346!3.98e-16!71;UBERON:0003075!3.98e-16!71;UBERON:0007284!3.98e-16!71;UBERON:0002410!7.91e-10!9;UBERON:0000010!9.14e-10!11;UBERON:0001049!2.62e-09!52;UBERON:0005068!2.62e-09!52;UBERON:0006241!2.62e-09!52;UBERON:0007135!2.62e-09!52;UBERON:0003056!1.11e-08!49;UBERON:0000033!1.78e-08!63;UBERON:0002616!8.70e-08!49;UBERON:0000955!1.94e-07!50;UBERON:0006238!1.94e-07!50;UBERON:0003080!7.59e-07!40 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,2.32e-37,9;UBERON:0000010,2.46e-30,11;UBERON:0001017,3.48e-17,73;UBERON:0001016,1.21e-16,75;UBERON:0004121,4.48e-14,95;UBERON:0000924,4.48e-14,95;UBERON:0006601,4.48e-14,95;UBERON:0000011,1.50e-13,3;UBERON:0010313,1.65e-13,3;UBERON:0002342,1.65e-13,3;UBERON:0002005,1.65e-13,3;UBERON:0005428,1.65e-13,3;UBERON:0005062,1.65e-13,3;UBERON:0000013,1.81e-13,3 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,15.8481681015439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,1.74986909166855,1.53985063787899,4.31257693094915,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0.898800331555214,1.15265491596466,0.103689612308478,0.135005938331691,0.210324961351382,0.856952953211411,0.441737081903227,0.122490799214954,0.0958454710182364,0,0,0.638436690425939,0.153606533256243,0.131886287730194,0.182975287204819,0,0.558365998002762,0.56276261003168,0.916789486660861,0,0.142371680799103,0.372798891650601,0.151452386666368,0.151143120213571,0,0,0,0,0.649776417447669,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.29688427812965,0.520455980298408,0.304465478312141,0,0.301445281105245,0.705532242814229,0.502666365318702,1.73036477414062,0,0,0,0,0,0,1.46390398505774,1.04723353406728,0,0,0,0,0.299581278809645,1.37250180845588,0.125654352112864,0.173824320192276,0.255715457330331,0,0.324482526135515,0,0,0,0,0.130120442962704,0.689706313300419,0.360124259610698,0.452114453507145,0.272145996605311,0,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0,0.210289948564127,0.205809224758569,0,0,0.213288250535234,0,0,0.403367049246685,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.228497025219458,0,0,0.387904974335251,0.140271639780637,0.758838445491087,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0.327726629431476,0,0,0,0,0,0,1.28440471990234,0,0,0,4.41711507182759,3.12350995437311,8.83235930704476,4.77937595905104,4.23317480756549,4.81230102341015,2.83367491172426,4.67609372658099,6.7198922250909,0,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0,1.05418608574999,0,0.680879211507576,0,0.258717367565509,1.28602221018955,0.709360934569094,0.356737635204141,0.493647061806363,0.608929898229199,0,0,0,0,0,0,0,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0.259229946583586,0,0,0.149516546043979,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0.572895513439397,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0.280924522409647,0.192075457214608,0.17230640686684,0,0.115884325944855,0.578727661391115,0.412085900803307,0,0,0.354951612318675,0.715308569841963,0.290692833264657,0,0.169229215783353,0,0.263069711437843,0.135804113845862,0.561142271657738,0.237270036248348,0.197008964751127,0.409231043169689,0.154936841185966,0.578719832943424,0.499621155875892,0.467863216890817,0.214871054048298,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,15.8481681015439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,1.74986909166855,1.53985063787899,4.31257693094915,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0.898800331555214,1.15265491596466,0.103689612308478,0.135005938331691,0.210324961351382,0.856952953211411,0.441737081903227,0.122490799214954,0.0958454710182364,0,0,0.638436690425939,0.153606533256243,0.131886287730194,0.182975287204819,0,0.558365998002762,0.56276261003168,0.916789486660861,0,0.142371680799103,0.372798891650601,0.151452386666368,0.151143120213571,0,0,0,0,0.649776417447669,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.29688427812965,0.520455980298408,0.304465478312141,0,0.301445281105245,0.705532242814229,0.502666365318702,1.73036477414062,0,0,0,0,0,0,1.46390398505774,1.04723353406728,0,0,0,0,0.299581278809645,1.37250180845588,0.125654352112864,0.173824320192276,0.255715457330331,0,0.324482526135515,0,0,0,0,0.130120442962704,0.689706313300419,0.360124259610698,0.452114453507145,0.272145996605311,0,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0,0.210289948564127,0.205809224758569,0,0,0.213288250535234,0,0,0.403367049246685,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.228497025219458,0,0,0.387904974335251,0.140271639780637,0.758838445491087,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0.327726629431476,0,0,0,0,0,0,1.28440471990234,0,0,0,4.41711507182759,3.12350995437311,8.83235930704476,4.77937595905104,4.23317480756549,4.81230102341015,2.83367491172426,4.67609372658099,6.7198922250909,0,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0,1.05418608574999,0,0.680879211507576,0,0.258717367565509,1.28602221018955,0.709360934569094,0.356737635204141,0.493647061806363,0.608929898229199,0,0,0,0,0,0,0,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0.259229946583586,0,0,0.149516546043979,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0.572895513439397,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0.280924522409647,0.192075457214608,0.17230640686684,0,0.115884325944855,0.578727661391115,0.412085900803307,0,0,0.354951612318675,0.715308569841963,0.290692833264657,0,0.169229215783353,0,0.263069711437843,0.135804113845862,0.561142271657738,0.237270036248348,0.197008964751127,0.409231043169689,0.154936841185966,0.578719832943424,0.499621155875892,0.467863216890817,0.214871054048298,0,0,0.231867835620421 | ||
|short_description=p5@LOC100047004,p5@Stk32a | |short_description=p5@LOC100047004,p5@Stk32a | ||
}} | }} |
Revision as of 18:44, 13 November 2012
Short description: | p5@LOC100047004, p5@Stk32a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_LOC100047004_5end, CAGE_peak_5_at_Stk32a_5end |
Coexpression cluster: | MCL_coexpression_mm9:2239 |
Association with transcript: | 13bp_to_ENSMUST00000045477, NM_178749, uc008eue.1, uc012bcj.1_5end |
EntrezGene: | 100047004,269019 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 2.32e-37 | 9 |
neural cell | 2.88e-14 | 43 |
ectodermal cell | 6.85e-14 | 44 |
neurectodermal cell | 6.85e-14 | 44 |
neuron | 3.41e-09 | 33 |
neuronal stem cell | 3.41e-09 | 33 |
neuroblast | 3.41e-09 | 33 |
electrically signaling cell | 3.41e-09 | 33 |
oligodendrocyte precursor cell | 3.46e-08 | 8 |
embryonic cell | 7.12e-08 | 70 |
electrically responsive cell | 1.46e-07 | 39 |
electrically active cell | 1.46e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 2.32e-37 | 9 |
peripheral nervous system | 2.46e-30 | 11 |
central nervous system | 3.48e-17 | 73 |
nervous system | 1.21e-16 | 75 |
ectoderm-derived structure | 4.48e-14 | 95 |
ectoderm | 4.48e-14 | 95 |
presumptive ectoderm | 4.48e-14 | 95 |
parasympathetic nervous system | 1.50e-13 | 3 |
neural crest-derived structure | 1.65e-13 | 3 |
neural crest | 1.65e-13 | 3 |
enteric nervous system | 1.65e-13 | 3 |
vagal neural crest | 1.65e-13 | 3 |
neural fold | 1.65e-13 | 3 |
sympathetic nervous system | 1.81e-13 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.