FFCP PHASE1:Mm9::chr5:138404139..138404159,-: Difference between revisions
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|id=chr5:138404139..138404159,- | |id=chr5:138404139..138404159,- | ||
|ontology_enrichment_celltype=CL:0000107!9.47e-08!9 | |ontology_enrichment_celltype=CL:0000107!9.47e-08!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000107,4.08e-10,9;CL:0000221,1.08e-08,44;CL:0000133,1.08e-08,44;CL:0000540,1.62e-08,33;CL:0000047,1.62e-08,33;CL:0000031,1.62e-08,33;CL:0000404,1.62e-08,33;CL:0002319,5.49e-08,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.91e-18!102;UBERON:0000924!1.91e-18!102;UBERON:0006601!1.91e-18!102;UBERON:0000073!7.59e-15!75;UBERON:0001016!7.59e-15!75;UBERON:0001017!9.69e-14!73;UBERON:0005743!9.69e-14!73;UBERON:0002346!2.09e-10!71;UBERON:0003075!2.09e-10!71;UBERON:0007284!2.09e-10!71;UBERON:0000010!6.09e-09!11;UBERON:0000033!8.48e-08!63;UBERON:0002410!9.47e-08!9;UBERON:0001049!1.62e-07!52;UBERON:0005068!1.62e-07!52;UBERON:0006241!1.62e-07!52;UBERON:0007135!1.62e-07!52 | |ontology_enrichment_uberon=UBERON:0004121!1.91e-18!102;UBERON:0000924!1.91e-18!102;UBERON:0006601!1.91e-18!102;UBERON:0000073!7.59e-15!75;UBERON:0001016!7.59e-15!75;UBERON:0001017!9.69e-14!73;UBERON:0005743!9.69e-14!73;UBERON:0002346!2.09e-10!71;UBERON:0003075!2.09e-10!71;UBERON:0007284!2.09e-10!71;UBERON:0000010!6.09e-09!11;UBERON:0000033!8.48e-08!63;UBERON:0002410!9.47e-08!9;UBERON:0001049!1.62e-07!52;UBERON:0005068!1.62e-07!52;UBERON:0006241!1.62e-07!52;UBERON:0007135!1.62e-07!52 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.53e-22,95;UBERON:0000924,3.53e-22,95;UBERON:0006601,3.53e-22,95;UBERON:0001016,2.02e-19,75;UBERON:0001017,6.59e-18,73;UBERON:0010371,7.86e-15,73;UBERON:0000010,9.29e-12,11;UBERON:0002346,2.19e-11,64;UBERON:0003075,2.19e-11,64;UBERON:0007284,2.19e-11,64;UBERON:0000073,1.93e-10,54;UBERON:0002410,4.08e-10,9;UBERON:0010314,5.80e-10,92;UBERON:0001049,1.80e-09,52;UBERON:0005068,1.80e-09,52;UBERON:0006241,1.80e-09,52;UBERON:0007135,1.80e-09,52;UBERON:0000955,3.59e-07,47;UBERON:0006238,3.59e-07,47;UBERON:0002616,9.99e-07,46 | |||
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| ||
|short_description=p2@Gjc3 | |short_description=p2@Gjc3 | ||
}} | }} |
Revision as of 22:36, 13 November 2012
Short description: | p2@Gjc3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gjc3_5end |
Coexpression cluster: | MCL_coexpression_mm9:2357 |
Association with transcript: | 27bp_to_ENSMUST00000077119, NM_080450, uc009aeg.1_5end |
EntrezGene: | Gjc3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 4.08e-10 | 9 |
ectodermal cell | 1.08e-08 | 44 |
neurectodermal cell | 1.08e-08 | 44 |
neuron | 1.62e-08 | 33 |
neuronal stem cell | 1.62e-08 | 33 |
neuroblast | 1.62e-08 | 33 |
electrically signaling cell | 1.62e-08 | 33 |
neural cell | 5.49e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 3.53e-22 | 95 |
ectoderm | 3.53e-22 | 95 |
presumptive ectoderm | 3.53e-22 | 95 |
nervous system | 2.02e-19 | 75 |
central nervous system | 6.59e-18 | 73 |
ecto-epithelium | 7.86e-15 | 73 |
peripheral nervous system | 9.29e-12 | 11 |
neurectoderm | 2.19e-11 | 64 |
neural plate | 2.19e-11 | 64 |
presumptive neural plate | 2.19e-11 | 64 |
regional part of nervous system | 1.93e-10 | 54 |
autonomic nervous system | 4.08e-10 | 9 |
structure with developmental contribution from neural crest | 5.80e-10 | 92 |
neural tube | 1.80e-09 | 52 |
neural rod | 1.80e-09 | 52 |
future spinal cord | 1.80e-09 | 52 |
neural keel | 1.80e-09 | 52 |
brain | 3.59e-07 | 47 |
future brain | 3.59e-07 | 47 |
regional part of brain | 9.99e-07 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.