FFCP PHASE1:Mm9::chr19:30020231..30020242,+: Difference between revisions
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|id=chr19:30020231..30020242,+ | |id=chr19:30020231..30020242,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000068,6.18e-13,3;CL:0002202,6.18e-13,3;CL:0000069,6.18e-13,3;CL:0002632,6.18e-13,3;CL:0002368,6.18e-13,3;CL:0000307,6.18e-13,3;CL:0000377,6.18e-13,3;CL:0002076,4.90e-12,15;CL:0000223,1.89e-11,20;CL:0000239,2.40e-10,6;CL:0000677,2.40e-10,6;CL:0000584,2.40e-10,6;CL:0000066,6.34e-09,25;CL:0000075,6.99e-09,7;CL:0002563,6.35e-07,9;CL:0002251,6.35e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.02e-09!59;UBERON:0000160!4.03e-09!43;UBERON:0004119!5.05e-08!130;UBERON:0000925!5.05e-08!130;UBERON:0006595!5.05e-08!130;UBERON:0001007!7.20e-08!128;UBERON:0001555!7.20e-08!128;UBERON:0007026!7.20e-08!128;UBERON:0004921!4.54e-07!126;UBERON:0004185!4.54e-07!126 | |ontology_enrichment_uberon=UBERON:0005409!2.02e-09!59;UBERON:0000160!4.03e-09!43;UBERON:0004119!5.05e-08!130;UBERON:0000925!5.05e-08!130;UBERON:0006595!5.05e-08!130;UBERON:0001007!7.20e-08!128;UBERON:0001555!7.20e-08!128;UBERON:0007026!7.20e-08!128;UBERON:0004921!4.54e-07!126;UBERON:0004185!4.54e-07!126 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,6.18e-13,3;UBERON:0001005,6.18e-13,3;UBERON:0007196,6.18e-13,3;UBERON:0001558,6.18e-13,3;UBERON:0000344,2.37e-11,15;UBERON:0005409,5.79e-11,47;UBERON:0001007,8.41e-11,116;UBERON:0001555,8.41e-11,116;UBERON:0007026,8.41e-11,116;UBERON:0004119,1.48e-10,118;UBERON:0000925,1.48e-10,118;UBERON:0006595,1.48e-10,118;UBERON:0000160,2.10e-10,31;UBERON:0001242,6.74e-10,13;UBERON:0001262,6.74e-10,13;UBERON:0004786,6.74e-10,13;UBERON:0004921,8.17e-10,114;UBERON:0003350,6.35e-07,9;UBERON:0004808,6.35e-07,9;UBERON:0001277,6.35e-07,9;UBERON:0004923,8.78e-07,24 | |||
|phase1_expression=0,1.74487703819681,2.27499619694768,1.81478526784098,2.00358291978539,0.33575854382378,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.43993180514066,0.91763712426868,0,0,0.215471232685889,0.950117097281869,1.76421090831952,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.503587271902309,0.405507724878058,0,0,0,0,0.194429899074283,0.279972843250725,1.43752564364972,0,0,0,0.514518872071894,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0,0,0,0,0,0,0,0,0,0.529000920747499,2.02905142091174,0,0.679971333707751,0,0.649776417447669,0,0.421333260395256,0,0,0,0.985903938436763,0,0,0,5.41227602528035,5.32055717497707,4.04419556011827,0.34255163915718,0,0.29688427812965,0,0.304465478312141,0,0,0.23517741427141,0.125666591329675,0.247194967734374,0.144599356919912,0,0,0.220841518460394,0,0,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0.2562274405697,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0.411564272815887,0.199034266818493,0,0,0,0.414251545071004,0,0.36012412292203,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0.350296027101508,0.16455984991348,0,0,0.146199987425332,0,0.134206418760372,0,0,1.65209391491899,1.32225283331772,0.213288250535234,0,0.128867461322093,0.201683524623343,0.444756087689741,0.760902504450237,0.949058123089023,0.823494773620054,0.251335208800269,0.795825888164603,0.38992817423824,1.79763881730844,0.864552199498777,0.995706366271836,0.379335801906163,0.456994050438915,0,0,0.775809948670503,0.631222379012867,0.948548056863859,0.590440591918409,0.470996183524124,0.370191491765402,0,0.166845105716094,0,0.224862112384854,0,0,0.25462585178142,0,0,0,2.87536413054709,0.372140947668503,0.624075346229121,0.505157755894224,0.896987067609561,0.482443521363367,0.554259570499814,0.37898282354097,0,0,0.234690248288502,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0.289298117163023,0,0,0,0,0.160550589987792,0,0,0,0.315508219416257,0.390438744296638,0,0,0,0.283076530788832,0.404810701674894,0,0.395287777946524,0,0.283880170416537,0,0.325773918707152,0.494910368917606,0,0,0,0.188605079755898,0.295301892880773,0,0.516856586336442,0,0,0.316036757935816,1.05418608574999,0,0,0,0,0,0,0.535106452806212,0.493647061806363,0.608929898229199,0.704015124191131,0,0,4.28704257647848,0.161464426695906,0.241251699712623,0.477489376012546,0.328281799490123,2.33184669303881,0.18542530201051,0,0,0.185194527369712,0,0,0.228778173206523,0,0,0,1.90934123603023,0,0,0.108005340821801,1.25452977608681,1.52853794622324,0.539457385539283,0.330613822901344,0.523511883968059,0,0,0,0.149516546043979,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0.295379054349154,0,0,0,0.0974578807397524,0,0,0.453460767230423,0,0,0,1.15913756419314,0.187682475451182,0.73260649706906,12.0046292284277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419226325255965,0.183843508450014,0,0,0,0.505394423527595,0,0,0,0.128050304809739,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0.177475806159338,0.238436189947321,0.290692833264657,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0,0,0,0,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0.463735671240843 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|phase1_expression=0,1.74487703819681,2.27499619694768,1.81478526784098,2.00358291978539,0.33575854382378,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.43993180514066,0.91763712426868,0,0,0.215471232685889,0.950117097281869,1.76421090831952,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.503587271902309,0.405507724878058,0,0,0,0,0.194429899074283,0.279972843250725,1.43752564364972,0,0,0,0.514518872071894,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0,0,0,0,0,0,0,0,0,0.529000920747499,2.02905142091174,0,0.679971333707751,0,0.649776417447669,0,0.421333260395256,0,0,0,0.985903938436763,0,0,0,5.41227602528035,5.32055717497707,4.04419556011827,0.34255163915718,0,0.29688427812965,0,0.304465478312141,0,0,0.23517741427141,0.125666591329675,0.247194967734374,0.144599356919912,0,0,0.220841518460394,0,0,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0.2562274405697,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0.411564272815887,0.199034266818493,0,0,0,0.414251545071004,0,0.36012412292203,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0.350296027101508,0.16455984991348,0,0,0.146199987425332,0,0.134206418760372,0,0,1.65209391491899,1.32225283331772,0.213288250535234,0,0.128867461322093,0.201683524623343,0.444756087689741,0.760902504450237,0.949058123089023,0.823494773620054,0.251335208800269,0.795825888164603,0.38992817423824,1.79763881730844,0.864552199498777,0.995706366271836,0.379335801906163,0.456994050438915,0,0,0.775809948670503,0.631222379012867,0.948548056863859,0.590440591918409,0.470996183524124,0.370191491765402,0,0.166845105716094,0,0.224862112384854,0,0,0.25462585178142,0,0,0,2.87536413054709,0.372140947668503,0.624075346229121,0.505157755894224,0.896987067609561,0.482443521363367,0.554259570499814,0.37898282354097,0,0,0.234690248288502,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0.289298117163023,0,0,0,0,0.160550589987792,0,0,0,0.315508219416257,0.390438744296638,0,0,0,0.283076530788832,0.404810701674894,0,0.395287777946524,0,0.283880170416537,0,0.325773918707152,0.494910368917606,0,0,0,0.188605079755898,0.295301892880773,0,0.516856586336442,0,0,0.316036757935816,1.05418608574999,0,0,0,0,0,0,0.535106452806212,0.493647061806363,0.608929898229199,0.704015124191131,0,0,4.28704257647848,0.161464426695906,0.241251699712623,0.477489376012546,0.328281799490123,2.33184669303881,0.18542530201051,0,0,0.185194527369712,0,0,0.228778173206523,0,0,0,1.90934123603023,0,0,0.108005340821801,1.25452977608681,1.52853794622324,0.539457385539283,0.330613822901344,0.523511883968059,0,0,0,0.149516546043979,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0.295379054349154,0,0,0,0.0974578807397524,0,0,0.453460767230423,0,0,0,1.15913756419314,0.187682475451182,0.73260649706906,12.0046292284277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419226325255965,0.183843508450014,0,0,0,0.505394423527595,0,0,0,0.128050304809739,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0.177475806159338,0.238436189947321,0.290692833264657,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0,0,0,0,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0.463735671240843 | ||
|short_description=p3@Il33 | |short_description=p3@Il33 | ||
}} | }} |
Revision as of 22:58, 13 November 2012
Short description: | p3@Il33 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Il33_5end |
Coexpression cluster: | MCL_coexpression_mm9:495 |
Association with transcript: | -37bp_to_ENSMUST00000025724, NM_001164724, uc008hed.2_5end |
EntrezGene: | Il33 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 6.18e-13 | 3 |
epithelial cell of tracheobronchial tree | 6.18e-13 | 3 |
branched duct epithelial cell | 6.18e-13 | 3 |
epithelial cell of lower respiratory tract | 6.18e-13 | 3 |
respiratory epithelial cell | 6.18e-13 | 3 |
tracheal epithelial cell | 6.18e-13 | 3 |
tracheoblast | 6.18e-13 | 3 |
endo-epithelial cell | 4.90e-12 | 15 |
endodermal cell | 1.89e-11 | 20 |
brush border epithelial cell | 2.40e-10 | 6 |
gut absorptive cell | 2.40e-10 | 6 |
enterocyte | 2.40e-10 | 6 |
epithelial cell | 6.34e-09 | 25 |
columnar/cuboidal epithelial cell | 6.99e-09 | 7 |
intestinal epithelial cell | 6.35e-07 | 9 |
epithelial cell of alimentary canal | 6.35e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
trachea | 6.18e-13 | 3 |
respiratory airway | 6.18e-13 | 3 |
tracheobronchial tree | 6.18e-13 | 3 |
lower respiratory tract | 6.18e-13 | 3 |
mucosa | 2.37e-11 | 15 |
gastrointestinal system | 5.79e-11 | 47 |
digestive system | 8.41e-11 | 116 |
digestive tract | 8.41e-11 | 116 |
primitive gut | 8.41e-11 | 116 |
endoderm-derived structure | 1.48e-10 | 118 |
endoderm | 1.48e-10 | 118 |
presumptive endoderm | 1.48e-10 | 118 |
intestine | 2.10e-10 | 31 |
intestinal mucosa | 6.74e-10 | 13 |
wall of intestine | 6.74e-10 | 13 |
gastrointestinal system mucosa | 6.74e-10 | 13 |
subdivision of digestive tract | 8.17e-10 | 114 |
epithelium of mucosa | 6.35e-07 | 9 |
gastrointestinal system epithelium | 6.35e-07 | 9 |
intestinal epithelium | 6.35e-07 | 9 |
organ component layer | 8.78e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.