FFCP PHASE1:Mm9::chr3:68820614..68820629,+: Difference between revisions
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|id=chr3:68820614..68820629,+ | |id=chr3:68820614..68820629,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!2.10e-09!193;UBERON:0004120!2.10e-09!193;UBERON:0006603!2.10e-09!193;UBERON:0001048!7.25e-09!147;UBERON:0003104!9.47e-08!131;UBERON:0009142!9.47e-08!131;UBERON:0001041!2.21e-07!92 | |ontology_enrichment_uberon=UBERON:0000926!2.10e-09!193;UBERON:0004120!2.10e-09!193;UBERON:0006603!2.10e-09!193;UBERON:0001048!7.25e-09!147;UBERON:0003104!9.47e-08!131;UBERON:0009142!9.47e-08!131;UBERON:0001041!2.21e-07!92 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.27e-11,29;UBERON:0005057,1.27e-11,29;UBERON:0000077,3.41e-09,35;UBERON:0002390,4.05e-09,45;UBERON:0003061,4.05e-09,45;UBERON:0001048,1.55e-08,134;UBERON:0002370,1.89e-08,23;UBERON:0000974,1.89e-08,23;UBERON:0004807,1.89e-08,23;UBERON:0005058,1.89e-08,23;UBERON:0003351,1.89e-08,23;UBERON:0009113,1.89e-08,23;UBERON:0003295,1.89e-08,23;UBERON:0009722,1.89e-08,23;UBERON:0005562,1.89e-08,23;UBERON:0007690,1.89e-08,23;UBERON:0002193,2.32e-08,48;UBERON:0002405,2.32e-08,48;UBERON:0006562,4.98e-08,24;UBERON:0003408,4.98e-08,24;UBERON:0001557,4.98e-08,24;UBERON:0001042,4.98e-08,24;UBERON:0008814,4.98e-08,24;UBERON:0009145,4.98e-08,24;UBERON:0001041,2.63e-07,80;UBERON:0000072,5.90e-07,27 | |||
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| ||
|short_description=p4@Smc4 | |short_description=p4@Smc4 | ||
}} | }} |
Revision as of 08:42, 14 November 2012
Short description: | p4@Smc4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Smc4_5end |
Coexpression cluster: | MCL_coexpression_mm9:82 |
Association with transcript: | 0bp_to_ENSMUST00000124983_5end |
EntrezGene: | Smc4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 1.27e-11 | 29 |
immune organ | 1.27e-11 | 29 |
mixed endoderm/mesoderm-derived structure | 3.41e-09 | 35 |
hematopoietic system | 4.05e-09 | 45 |
blood island | 4.05e-09 | 45 |
primordium | 1.55e-08 | 134 |
thymus | 1.89e-08 | 23 |
neck | 1.89e-08 | 23 |
respiratory system epithelium | 1.89e-08 | 23 |
hemolymphoid system gland | 1.89e-08 | 23 |
pharyngeal epithelium | 1.89e-08 | 23 |
thymic region | 1.89e-08 | 23 |
pharyngeal gland | 1.89e-08 | 23 |
entire pharyngeal arch endoderm | 1.89e-08 | 23 |
thymus primordium | 1.89e-08 | 23 |
early pharyngeal endoderm | 1.89e-08 | 23 |
hemolymphoid system | 2.32e-08 | 48 |
immune system | 2.32e-08 | 48 |
pharynx | 4.98e-08 | 24 |
gland of gut | 4.98e-08 | 24 |
upper respiratory tract | 4.98e-08 | 24 |
chordate pharynx | 4.98e-08 | 24 |
pharyngeal arch system | 4.98e-08 | 24 |
pharyngeal region of foregut | 4.98e-08 | 24 |
foregut | 2.63e-07 | 80 |
segment of respiratory tract | 5.90e-07 | 27 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.