FFCP PHASE1:Mm9::chr6:54279832..54279837,+: Difference between revisions
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|id=chr6:54279832..54279837,+ | |id=chr6:54279832..54279837,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.50e-08,9;CL:0002251,3.50e-08,9;CL:0000066,1.48e-07,25;CL:0000075,1.54e-07,7;CL:0000239,8.19e-07,6;CL:0000677,8.19e-07,6;CL:0000584,8.19e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.05e-10!43;UBERON:0005409!1.35e-10!59;UBERON:0000344!2.61e-10!15;UBERON:0001242!6.63e-09!13;UBERON:0000060!6.63e-09!13;UBERON:0001262!6.63e-09!13;UBERON:0004786!6.63e-09!13;UBERON:0005156!2.30e-08!26;UBERON:0000990!2.30e-08!26;UBERON:0003133!2.21e-07!24;UBERON:0000485!4.23e-07!11;UBERON:0003103!5.59e-07!43 | |ontology_enrichment_uberon=UBERON:0000160!1.05e-10!43;UBERON:0005409!1.35e-10!59;UBERON:0000344!2.61e-10!15;UBERON:0001242!6.63e-09!13;UBERON:0000060!6.63e-09!13;UBERON:0001262!6.63e-09!13;UBERON:0004786!6.63e-09!13;UBERON:0005156!2.30e-08!26;UBERON:0000990!2.30e-08!26;UBERON:0003133!2.21e-07!24;UBERON:0000485!4.23e-07!11;UBERON:0003103!5.59e-07!43 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.12e-20,31;UBERON:0005409,9.15e-19,47;UBERON:0000344,5.81e-14,15;UBERON:0001242,5.68e-12,13;UBERON:0001262,5.68e-12,13;UBERON:0004786,5.68e-12,13;UBERON:0000485,2.02e-09,11;UBERON:0004923,4.52e-09,24;UBERON:0005156,8.59e-09,26;UBERON:0000990,8.59e-09,26;UBERON:0003350,3.50e-08,9;UBERON:0004808,3.50e-08,9;UBERON:0001277,3.50e-08,9;UBERON:0003103,5.30e-08,43;UBERON:0004119,8.45e-08,118;UBERON:0000925,8.45e-08,118;UBERON:0006595,8.45e-08,118;UBERON:0001007,8.79e-08,116;UBERON:0001555,8.79e-08,116;UBERON:0007026,8.79e-08,116;UBERON:0003133,1.64e-07,24;UBERON:0004921,8.30e-07,114 | |||
|phase1_expression=2.88267924788629,27.5690572035095,47.7749201359013,40.5302043151152,45.0806156951712,12.5909453933917,22.4268134971705,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,2.04103896362567,0,0,66.2368630364704,80.0638390924423,68.9078356938024,58.5836314776342,40.0776492795754,158.099484987703,86.4463345076562,45.6764851949928,0,0,0,1.73310971850765,3.98963148860382,3.26670970019791,0,0,0,0,0,0,0.251793635951155,0,0,0,0,0,0,0,1.43752564364972,0,0,0,0.257259436035947,1.14613375975503,1.54701627683233,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0,0,0.210324961351382,0,0,0,0.191690942036473,0.919218786610021,0,0,0.153606533256243,0.263772575460388,0.0914876436024097,1.56274011167028,0.279182999001381,0,0.30559649555362,0,0.284743361598206,0.372798891650601,0.151452386666368,0,1.15945795480671,0,0,0,0,0,1.54488862144927,0,0,0,7.18301440861071,0,0,0,1.73192832808971,1.01343946190039,2.02209778005913,11.3042040921869,0,1.33597925158342,0.867426633830679,0.608930956624282,0.230615497256059,0.753613202763113,0.470354828542819,0.251333182659351,1.73036477414062,0.433798070759735,0,0.323533699894818,0,0.969750506270444,14.9113408974498,0.878342391034642,1.25668024088073,36.27490183962,0.11981512450592,0,0,0.149790639404823,0.457500602818626,0.125654352112864,0,0,0,0.324482526135515,0.509196819251581,1.11966273549084,6.82351447770922,0.210441855886474,0.260240885925407,0,0,0.150704817835715,0.544291993210623,0.768682321709099,0.187403449119458,0,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0.205782136407943,1.19420560091096,0,0,0,2.27838349789052,2.81431271977315,3.42117916775928,3.55117103377815,5.50939848892731,3.85667782218446,3.48800917125612,2.95100741539581,2.33530684734339,1.48103864922132,1.14917224855367,0.972825714550269,1.16959989940266,1.09775057645525,0.939444931322602,0.210289948564127,0.617427674275707,23.4597335918497,26.9739577996815,0.426576501070468,0.464473343720877,0.257734922644187,2.62188582010345,2.89091456998331,6.08722003560189,38.4368539851054,12.8465184684728,8.29406189040889,4.57599885694647,4.67913809085888,34.1551375288604,33.933673830327,31.8626037206988,0.189667900953082,1.37098215131675,1.1270773567308,1.62921062276251,2.32742984601151,1.8936671370386,1.83385957660346,2.50937251565324,3.767969468193,3.20832626196681,0,0.166845105716094,0.589676985339609,0.224862112384854,0.202860121388503,0.482354319504834,0,1.43848068725405,0.486405680325106,0,8.62609239164127,1.11642284300551,0,0,0,0,2.03228509183265,0,0.325929952884052,0.848725428875941,0.234690248288502,1.17254380209271,0.238043640886014,0.585400943573396,0.472905432318573,0.8858587585951,1.59454768657487,0.655453258862952,0.690739927463582,2.4590339958857,0,0,0.491764273019036,0.275936746304732,0,0.117211686592203,0,0.757412781613119,0.315508219416257,0.390438744296638,0,0,0,0.566153061577665,0.404810701674894,0.292255857911312,0,0.321321316421807,2.2710413633323,2.67098405500883,0.977321756121456,6.10389454998381,0,0.242780636154981,0.604647113929502,0,0.295301892880773,0.922305443831782,1.29214146584111,0,1.06949213515416,0,0,1.03135543248187,3.06395645178409,0.900305470156551,3.75140182969988,5.5727629108214,0.532020700926821,0.891844088010353,2.46823530903181,5.48036908406279,0.469343416127421,1.27099242518292,9.2621927183084,0.16488625294148,0.161464426695906,0.0603129249281559,0.238744688006273,0.164140899745061,25.9417944600567,0.18542530201051,0.170870880797853,1.23832120777933,0.185194527369712,0.188368457004691,0,0,0,0.139951452323658,0,1.90934123603023,0,0.813277868507395,1.72808545314882,2.29997125615916,2.40198820120795,2.02296519577231,2.14898984885873,2.6175594198403,17.3684064211002,4.97071450469541,5.6369293868419,0.897099276263873,1.32366792365678,1.75006069509643,1.54991788173277,2.19642963138012,1.5256441023948,2.604087696879,4.08951443260272,4.83168241652012,4.89651010638371,0,1.01362607645082,0.205421914329655,0,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0,0.100826185136841,0.292373642219257,0.192423683280659,0,1.13365191807606,0,0,0,1.54551675225752,11.0732660516197,1.83151624267265,1.50057865355346,7.02200945649509,0,0.920650473014354,0.572895513439397,0.343706364687375,0,0,0.675022500231806,0.45032120322422,0.453142408984205,0,0.207574695168353,0,0.512200817262403,0.972426868273176,0,0.551530525350042,1.33348036680969,0.412070114477788,0.64183841918363,0.505394423527595,0.25347929989024,0.565879024158229,0.842773567228942,0.512201219238954,0.287177344778066,0,0.579421629724277,0.578727661391115,0.824171801606613,0.441596760403192,0.342869252385415,0.887379030796687,0.715308569841963,0.581385666529314,0.658765662907314,0.846146078916765,0.73171189149109,1.31534855718921,0.814824683075171,0.561142271657738,0.593175090620871,0.591026894253381,0.409231043169689,0.154936841185966,0.771626443924566,0,0,0.429742108096597,0.191288332068843,0.220591419119515,0.927471342481686 | |phase1_expression=2.88267924788629,27.5690572035095,47.7749201359013,40.5302043151152,45.0806156951712,12.5909453933917,22.4268134971705,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,2.04103896362567,0,0,66.2368630364704,80.0638390924423,68.9078356938024,58.5836314776342,40.0776492795754,158.099484987703,86.4463345076562,45.6764851949928,0,0,0,1.73310971850765,3.98963148860382,3.26670970019791,0,0,0,0,0,0,0.251793635951155,0,0,0,0,0,0,0,1.43752564364972,0,0,0,0.257259436035947,1.14613375975503,1.54701627683233,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0,0,0.210324961351382,0,0,0,0.191690942036473,0.919218786610021,0,0,0.153606533256243,0.263772575460388,0.0914876436024097,1.56274011167028,0.279182999001381,0,0.30559649555362,0,0.284743361598206,0.372798891650601,0.151452386666368,0,1.15945795480671,0,0,0,0,0,1.54488862144927,0,0,0,7.18301440861071,0,0,0,1.73192832808971,1.01343946190039,2.02209778005913,11.3042040921869,0,1.33597925158342,0.867426633830679,0.608930956624282,0.230615497256059,0.753613202763113,0.470354828542819,0.251333182659351,1.73036477414062,0.433798070759735,0,0.323533699894818,0,0.969750506270444,14.9113408974498,0.878342391034642,1.25668024088073,36.27490183962,0.11981512450592,0,0,0.149790639404823,0.457500602818626,0.125654352112864,0,0,0,0.324482526135515,0.509196819251581,1.11966273549084,6.82351447770922,0.210441855886474,0.260240885925407,0,0,0.150704817835715,0.544291993210623,0.768682321709099,0.187403449119458,0,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0.205782136407943,1.19420560091096,0,0,0,2.27838349789052,2.81431271977315,3.42117916775928,3.55117103377815,5.50939848892731,3.85667782218446,3.48800917125612,2.95100741539581,2.33530684734339,1.48103864922132,1.14917224855367,0.972825714550269,1.16959989940266,1.09775057645525,0.939444931322602,0.210289948564127,0.617427674275707,23.4597335918497,26.9739577996815,0.426576501070468,0.464473343720877,0.257734922644187,2.62188582010345,2.89091456998331,6.08722003560189,38.4368539851054,12.8465184684728,8.29406189040889,4.57599885694647,4.67913809085888,34.1551375288604,33.933673830327,31.8626037206988,0.189667900953082,1.37098215131675,1.1270773567308,1.62921062276251,2.32742984601151,1.8936671370386,1.83385957660346,2.50937251565324,3.767969468193,3.20832626196681,0,0.166845105716094,0.589676985339609,0.224862112384854,0.202860121388503,0.482354319504834,0,1.43848068725405,0.486405680325106,0,8.62609239164127,1.11642284300551,0,0,0,0,2.03228509183265,0,0.325929952884052,0.848725428875941,0.234690248288502,1.17254380209271,0.238043640886014,0.585400943573396,0.472905432318573,0.8858587585951,1.59454768657487,0.655453258862952,0.690739927463582,2.4590339958857,0,0,0.491764273019036,0.275936746304732,0,0.117211686592203,0,0.757412781613119,0.315508219416257,0.390438744296638,0,0,0,0.566153061577665,0.404810701674894,0.292255857911312,0,0.321321316421807,2.2710413633323,2.67098405500883,0.977321756121456,6.10389454998381,0,0.242780636154981,0.604647113929502,0,0.295301892880773,0.922305443831782,1.29214146584111,0,1.06949213515416,0,0,1.03135543248187,3.06395645178409,0.900305470156551,3.75140182969988,5.5727629108214,0.532020700926821,0.891844088010353,2.46823530903181,5.48036908406279,0.469343416127421,1.27099242518292,9.2621927183084,0.16488625294148,0.161464426695906,0.0603129249281559,0.238744688006273,0.164140899745061,25.9417944600567,0.18542530201051,0.170870880797853,1.23832120777933,0.185194527369712,0.188368457004691,0,0,0,0.139951452323658,0,1.90934123603023,0,0.813277868507395,1.72808545314882,2.29997125615916,2.40198820120795,2.02296519577231,2.14898984885873,2.6175594198403,17.3684064211002,4.97071450469541,5.6369293868419,0.897099276263873,1.32366792365678,1.75006069509643,1.54991788173277,2.19642963138012,1.5256441023948,2.604087696879,4.08951443260272,4.83168241652012,4.89651010638371,0,1.01362607645082,0.205421914329655,0,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0,0.100826185136841,0.292373642219257,0.192423683280659,0,1.13365191807606,0,0,0,1.54551675225752,11.0732660516197,1.83151624267265,1.50057865355346,7.02200945649509,0,0.920650473014354,0.572895513439397,0.343706364687375,0,0,0.675022500231806,0.45032120322422,0.453142408984205,0,0.207574695168353,0,0.512200817262403,0.972426868273176,0,0.551530525350042,1.33348036680969,0.412070114477788,0.64183841918363,0.505394423527595,0.25347929989024,0.565879024158229,0.842773567228942,0.512201219238954,0.287177344778066,0,0.579421629724277,0.578727661391115,0.824171801606613,0.441596760403192,0.342869252385415,0.887379030796687,0.715308569841963,0.581385666529314,0.658765662907314,0.846146078916765,0.73171189149109,1.31534855718921,0.814824683075171,0.561142271657738,0.593175090620871,0.591026894253381,0.409231043169689,0.154936841185966,0.771626443924566,0,0,0.429742108096597,0.191288332068843,0.220591419119515,0.927471342481686 | ||
|short_description=p@chr6:54279832..54279837,+ | |short_description=p@chr6:54279832..54279837,+ | ||
}} | }} |
Revision as of 11:45, 14 November 2012
Short description: | p@chr6:54279832..54279837, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:54279832..54279837, + |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.50e-08 | 9 |
epithelial cell of alimentary canal | 3.50e-08 | 9 |
epithelial cell | 1.48e-07 | 25 |
columnar/cuboidal epithelial cell | 1.54e-07 | 7 |
brush border epithelial cell | 8.19e-07 | 6 |
gut absorptive cell | 8.19e-07 | 6 |
enterocyte | 8.19e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.12e-20 | 31 |
gastrointestinal system | 9.15e-19 | 47 |
mucosa | 5.81e-14 | 15 |
intestinal mucosa | 5.68e-12 | 13 |
wall of intestine | 5.68e-12 | 13 |
gastrointestinal system mucosa | 5.68e-12 | 13 |
simple columnar epithelium | 2.02e-09 | 11 |
organ component layer | 4.52e-09 | 24 |
reproductive structure | 8.59e-09 | 26 |
reproductive system | 8.59e-09 | 26 |
epithelium of mucosa | 3.50e-08 | 9 |
gastrointestinal system epithelium | 3.50e-08 | 9 |
intestinal epithelium | 3.50e-08 | 9 |
compound organ | 5.30e-08 | 43 |
endoderm-derived structure | 8.45e-08 | 118 |
endoderm | 8.45e-08 | 118 |
presumptive endoderm | 8.45e-08 | 118 |
digestive system | 8.79e-08 | 116 |
digestive tract | 8.79e-08 | 116 |
primitive gut | 8.79e-08 | 116 |
reproductive organ | 1.64e-07 | 24 |
subdivision of digestive tract | 8.30e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.