FFCP PHASE1:Mm9::chr11:70468663..70468684,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr11:70468663..70468684,- | |id=chr11:70468663..70468684,- | ||
|ontology_enrichment_celltype=CL:0002563!2.87e-13!9;CL:0002251!2.87e-13!9;CL:0000239!7.60e-10!6;CL:0000677!7.60e-10!6;CL:0000212!7.60e-10!6;CL:0000584!7.60e-10!6;CL:0000075!2.96e-08!7;CL:0002076!5.30e-07!15 | |ontology_enrichment_celltype=CL:0002563!2.87e-13!9;CL:0002251!2.87e-13!9;CL:0000239!7.60e-10!6;CL:0000677!7.60e-10!6;CL:0000212!7.60e-10!6;CL:0000584!7.60e-10!6;CL:0000075!2.96e-08!7;CL:0002076!5.30e-07!15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.38e-27,6;CL:0000677,5.38e-27,6;CL:0000584,5.38e-27,6;CL:0000075,4.36e-23,7;CL:0002563,7.22e-18,9;CL:0002251,7.22e-18,9;CL:0000682,1.60e-14,3;CL:0000066,1.28e-13,25;CL:0002076,1.55e-10,15;CL:0000223,8.90e-08,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.05e-21!15;UBERON:0001242!1.85e-18!13;UBERON:0000060!1.85e-18!13;UBERON:0001262!1.85e-18!13;UBERON:0004786!1.85e-18!13;UBERON:0003350!2.87e-13!9;UBERON:0004808!2.87e-13!9;UBERON:0001277!2.87e-13!9;UBERON:0000160!9.19e-12!43;UBERON:0004923!1.47e-11!24;UBERON:0000485!2.09e-10!11;UBERON:0005409!2.99e-09!59 | |ontology_enrichment_uberon=UBERON:0000344!2.05e-21!15;UBERON:0001242!1.85e-18!13;UBERON:0000060!1.85e-18!13;UBERON:0001262!1.85e-18!13;UBERON:0004786!1.85e-18!13;UBERON:0003350!2.87e-13!9;UBERON:0004808!2.87e-13!9;UBERON:0001277!2.87e-13!9;UBERON:0000160!9.19e-12!43;UBERON:0004923!1.47e-11!24;UBERON:0000485!2.09e-10!11;UBERON:0005409!2.99e-09!59 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,6.80e-35,15;UBERON:0000160,1.28e-29,31;UBERON:0001242,9.98e-27,13;UBERON:0001262,9.98e-27,13;UBERON:0004786,9.98e-27,13;UBERON:0004923,3.42e-21,24;UBERON:0005409,9.60e-19,47;UBERON:0003350,7.22e-18,9;UBERON:0004808,7.22e-18,9;UBERON:0001277,7.22e-18,9;UBERON:0000485,1.53e-14,11;UBERON:0001962,1.63e-10,2;UBERON:0001961,1.63e-10,2;UBERON:0001744,1.63e-10,2;UBERON:0001007,1.89e-08,116;UBERON:0001555,1.89e-08,116;UBERON:0007026,1.89e-08,116;UBERON:0004119,2.94e-08,118;UBERON:0000925,2.94e-08,118;UBERON:0006595,2.94e-08,118;UBERON:0002465,2.81e-07,3 | |||
|phase1_expression=0,14.3079917132138,12.2849794635175,9.37639055051173,9.5170188689806,2.18243053485457,2.10251376535973,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,11.5194544411253,11.4704640533585,11.4846392823004,6.8921919385452,8.40337807474967,0.950117097281869,3.78045194639896,1.77384408524244,0,0,0,0.866554859253824,0.498703936075477,0.408338712524738,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0.194429899074283,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0.135005938331691,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29911349687732,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0,0.0810688095458557,0.292399974850665,0,0.134206418760372,0,0,6.60837565967596,3.70230793328962,0,0,0,0,0,0,3.32170343081158,0,0.251335208800269,0.397912944082302,0,2.69645822596266,2.80979464837102,1.7922714592893,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0.120625849856312,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0,14.3079917132138,12.2849794635175,9.37639055051173,9.5170188689806,2.18243053485457,2.10251376535973,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,11.5194544411253,11.4704640533585,11.4846392823004,6.8921919385452,8.40337807474967,0.950117097281869,3.78045194639896,1.77384408524244,0,0,0,0.866554859253824,0.498703936075477,0.408338712524738,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0.194429899074283,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0.135005938331691,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29911349687732,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0,0.0810688095458557,0.292399974850665,0,0.134206418760372,0,0,6.60837565967596,3.70230793328962,0,0,0,0,0,0,3.32170343081158,0,0.251335208800269,0.397912944082302,0,2.69645822596266,2.80979464837102,1.7922714592893,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0.120625849856312,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p@chr11:70468663..70468684,- | |short_description=p@chr11:70468663..70468684,- | ||
}} | }} |
Revision as of 12:52, 14 November 2012
Short description: | p@chr11:70468663..70468684, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:70468663..70468684, - |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.38e-27 | 6 |
gut absorptive cell | 5.38e-27 | 6 |
enterocyte | 5.38e-27 | 6 |
columnar/cuboidal epithelial cell | 4.36e-23 | 7 |
intestinal epithelial cell | 7.22e-18 | 9 |
epithelial cell of alimentary canal | 7.22e-18 | 9 |
M cell of gut | 1.60e-14 | 3 |
epithelial cell | 1.28e-13 | 25 |
endo-epithelial cell | 1.55e-10 | 15 |
endodermal cell | 8.90e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 6.80e-35 | 15 |
intestine | 1.28e-29 | 31 |
intestinal mucosa | 9.98e-27 | 13 |
wall of intestine | 9.98e-27 | 13 |
gastrointestinal system mucosa | 9.98e-27 | 13 |
organ component layer | 3.42e-21 | 24 |
gastrointestinal system | 9.60e-19 | 47 |
epithelium of mucosa | 7.22e-18 | 9 |
gastrointestinal system epithelium | 7.22e-18 | 9 |
intestinal epithelium | 7.22e-18 | 9 |
simple columnar epithelium | 1.53e-14 | 11 |
gut-associated lymphoid tissue | 1.63e-10 | 2 |
mucosa-associated lymphoid tissue | 1.63e-10 | 2 |
lymphoid tissue | 1.63e-10 | 2 |
digestive system | 1.89e-08 | 116 |
digestive tract | 1.89e-08 | 116 |
primitive gut | 1.89e-08 | 116 |
endoderm-derived structure | 2.94e-08 | 118 |
endoderm | 2.94e-08 | 118 |
presumptive endoderm | 2.94e-08 | 118 |
lymphoid system | 2.81e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.