FFCP PHASE1:Mm9::chr1:173367699..173367715,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr1:173367699..173367715,+ | |id=chr1:173367699..173367715,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.97e-07!25 | |ontology_enrichment_celltype=CL:0000066!1.97e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.57e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.53e-18!130;UBERON:0000925!1.53e-18!130;UBERON:0006595!1.53e-18!130;UBERON:0001007!1.06e-17!128;UBERON:0001555!1.06e-17!128;UBERON:0007026!1.06e-17!128;UBERON:0004921!1.69e-16!126;UBERON:0004185!1.69e-16!126;UBERON:0000466!8.15e-15!79;UBERON:0005409!2.80e-14!59;UBERON:0000160!4.81e-14!43;UBERON:0002100!1.39e-11!98;UBERON:0009569!2.32e-11!66;UBERON:0005177!7.09e-11!85;UBERON:0000464!1.92e-09!57;UBERON:0000344!2.50e-09!15;UBERON:0000481!4.47e-09!230;UBERON:0003104!4.96e-08!131;UBERON:0009142!4.96e-08!131;UBERON:0001242!5.17e-08!13;UBERON:0000060!5.17e-08!13;UBERON:0001262!5.17e-08!13;UBERON:0004786!5.17e-08!13;UBERON:0000926!1.16e-07!193;UBERON:0004120!1.16e-07!193;UBERON:0006603!1.16e-07!193;UBERON:0003914!1.37e-07!47;UBERON:0004923!2.93e-07!24;UBERON:0002365!7.42e-07!25;UBERON:0002330!7.42e-07!25 | |ontology_enrichment_uberon=UBERON:0004119!1.53e-18!130;UBERON:0000925!1.53e-18!130;UBERON:0006595!1.53e-18!130;UBERON:0001007!1.06e-17!128;UBERON:0001555!1.06e-17!128;UBERON:0007026!1.06e-17!128;UBERON:0004921!1.69e-16!126;UBERON:0004185!1.69e-16!126;UBERON:0000466!8.15e-15!79;UBERON:0005409!2.80e-14!59;UBERON:0000160!4.81e-14!43;UBERON:0002100!1.39e-11!98;UBERON:0009569!2.32e-11!66;UBERON:0005177!7.09e-11!85;UBERON:0000464!1.92e-09!57;UBERON:0000344!2.50e-09!15;UBERON:0000481!4.47e-09!230;UBERON:0003104!4.96e-08!131;UBERON:0009142!4.96e-08!131;UBERON:0001242!5.17e-08!13;UBERON:0000060!5.17e-08!13;UBERON:0001262!5.17e-08!13;UBERON:0004786!5.17e-08!13;UBERON:0000926!1.16e-07!193;UBERON:0004120!1.16e-07!193;UBERON:0006603!1.16e-07!193;UBERON:0003914!1.37e-07!47;UBERON:0004923!2.93e-07!24;UBERON:0002365!7.42e-07!25;UBERON:0002330!7.42e-07!25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.66e-16,118;UBERON:0000925,3.66e-16,118;UBERON:0006595,3.66e-16,118;UBERON:0001007,2.23e-15,116;UBERON:0001555,2.23e-15,116;UBERON:0007026,2.23e-15,116;UBERON:0004921,3.00e-14,114;UBERON:0002100,4.50e-14,90;UBERON:0005177,1.48e-13,79;UBERON:0000160,6.18e-13,31;UBERON:0005409,1.19e-12,47;UBERON:0009569,2.29e-11,66;UBERON:0000344,2.48e-09,15;UBERON:0001242,5.14e-08,13;UBERON:0001262,5.14e-08,13;UBERON:0004786,5.14e-08,13;UBERON:0003914,1.36e-07,47;UBERON:0004923,2.91e-07,24;UBERON:0003104,4.43e-07,61;UBERON:0009142,4.43e-07,61;UBERON:0002365,7.38e-07,25;UBERON:0002330,7.38e-07,25 | |||
|phase1_expression=16.9757777931082,510.899996784025,535.534104761484,213.237268971315,261.467571031993,240.906755193562,275.429303262125,0,0.84473233291,0.936258105287974,0,0,0,0,4.33042690360362,3.44207954562704,2.79824751251259,1.26184866143295,1.23402990245165,0.42438965179803,39.5451299202474,0,0,338.543966630849,436.10704330869,513.937607882943,377.34750863535,407.456101009016,360.664450128198,236.404261714815,486.920201399049,22.2260735710871,17.8368788399525,31.6963362030877,48.2382204984629,48.7067510900383,49.6131535717557,1.67412652294763,14.0640362014284,4.71171369576418,0,0.683045484958446,0,112.299961634215,110.196724235612,159.502127628501,0.782391344348039,1.74420125104357,4.39372365468944,3.69416808241138,2.51975558925653,1.43752564364972,0.167782606057736,0,0,10.2903774414379,14.3266719969378,78.8978301184487,1.01158230429799,1.5869729378161,0.633831403506179,3.38844532069132,2.66788438833342,1.3498495759221,1.97773272513395,0.7104801149461,2.99600110518405,5.37905627450176,1.55534418462716,1.08004750665353,2.10324961351382,4.28476476605705,5.74258206474195,1.5923803897944,1.15014565221884,0.919218786610021,1.10115880999389,6.89511625660014,2.76491759861238,1.31886287730194,2.37867873366265,2.6045668527838,4.18774498502071,2.8138130501584,5.04234217663473,5.89257170947335,6.12198227436143,2.98239113320481,1.21161909333094,3.09843396437821,230.152404029132,89.4840832060642,140.074094743797,93.3686521533424,83.1713814333016,82.8849741130071,43.8186590811066,0.852151612890289,0,0,56.6190547502256,0,0,0,169.728976152792,181.912383411121,186.538520210455,88.9492423011477,26.1527262483643,24.7898372238257,26.0227990149204,25.2706346999077,21.6778567420695,25.6228488939458,30.1027090267404,26.1386509965725,86.7654336747652,42.8014096482938,9.73071607144862,12.4560474459505,6.18356251689102,9.69750506270444,238.581454359196,5.85561594023094,3.97948742945565,148.420549076192,3.59445373517761,2.39961092397363,3.68503658511888,5.39246301857362,5.94750783664214,1.50785222535437,6.60532416730651,6.39288643325826,6.44142938134636,6.48965052271031,36.1529741668623,25.5034289750691,51.8081654789033,29.8827435358793,9.23855145035196,7.35686734187113,6.30217454318722,9.79581315932148,6.19132142277083,6.79002717509704,8.99536555773397,17.8505325809921,9.48499168904506,10.7790465695657,11.0849208223288,11.1789823538063,25.0242524303038,22.2881386574187,30.4557561883756,43.986572966887,0.702213187313235,0.51469581422943,0,24.8550927042602,27.2050229578072,29.1700539566844,23.4377288229358,28.1372851398787,29.1564843357145,28.6016752043002,30.0466209567573,42.2690539369154,31.5954911833882,49.9069090800449,41.588299297024,44.2985961898757,36.6648692536055,47.643278659932,6.09840850835969,4.52780294468852,296.716067119451,107.631380632063,24.5281488115519,24.8493238890669,24.4848176511977,33.6811486120982,29.3539017875229,50.2195652937156,150.42571250961,83.9964669092455,92.2400216296989,81.3731970648307,94.7525463398924,153.698118879872,142.218836817549,142.585151650127,35.6575653791794,37.3592636233813,33.8123207019241,51.1164832891739,52.9490289967618,47.0611351464037,59.8217641195474,60.5201606716369,65.782466965536,71.2001635828789,74.4096093988744,13.1807633515714,14.9384836286034,13.9414509678609,24.7489348093974,32.3177394068239,42.5225172474971,47.7575588168346,83.8239122426933,85.6631609146814,130.829067939893,94.8959416554684,110.14929860944,72.7427168487682,54.5368137106613,70.919197640415,126.371182073958,21.6020209418353,26.4003261836082,27.6684489813557,40.6014129539109,65.6624529171918,117.593558597691,93.07875002817,81.1820992146884,97.6659281351097,87.8595775302754,105.691837991651,117.425787668809,138.71844717967,6.03165135757089,4.35124547054968,63.4375912194557,78.0900992042393,4.0137647496948,5.62616095642575,0,20.1976741763498,5.36363973007636,7.02789739733949,1.07711698866399,0.716906393857656,0.222798674082394,0.283076530788832,3.23848561339915,5.84511715822624,2.37172666767914,3.85585579706168,57.3437944241405,38.8183015994616,36.3237919358475,65.4931388200966,26.5490276679926,50.9839335925461,55.9298580384789,46.3968496199509,37.7986422887389,46.1152721915891,55.8205113243358,55.6206606100583,45.988161811629,38.8725212261054,32.6797686582496,44.3482835967203,24.1712120085189,15.4852540866927,22.8964870295475,23.3627368184436,23.9409315417069,17.658512942605,25.0114511315224,19.790221692449,55.8518665191631,121.591608675833,51.3831167468061,42.0459945000774,48.6007924354676,41.9174828250683,67.6841190497784,72.2219958878269,128.251568117134,5.7481843623258,7.51831875510552,33.2282857420788,22.5937323391048,11.6788443342908,5.87785179200408,8.00723606222829,27.1965487990168,20.0130576822831,24.8759952847963,114.560474161814,17.7148156405436,40.0539350239892,48.926419392276,58.3356345880368,55.4640911915291,60.4192271803997,69.1809424421062,98.1584782440111,123.65268452037,88.2301824583434,8.45539408026285,45.4530299973696,48.1484207230154,34.4178603368964,44.3018194528618,53.8970040315582,56.8009035045449,69.9197546612012,76.6521807751946,29.9564309824248,27.3628505944972,17.3806116345498,15.0016659314722,11.5036272024607,11.3031115990682,7.16106782669926,7.9472541912506,7.93289966831794,8.27061352177632,12.1159739937777,7.23964663222498,9.37683521772617,9.55087231249574,8.46664206434899,7.71387554398355,51.467797080653,81.0248729815336,66.7471093174499,46.8398079655779,65.1048931888482,49.3604910436609,69.4144655972935,87.2479302851798,67.712234044774,6.21227026878773,5.52390283808612,4.01026859407578,7.38968684077857,3.42541259885321,3.7769694869485,2.70009000092722,5.40385443869065,4.53142408984205,3.62432218226274,2.49089634202024,9.57659696162474,12.6342868258059,21.3933911020099,6.70762120409543,8.27295788025063,20.224452229947,22.0457511245617,19.5760717851007,21.4792629999228,18.2505095920973,19.9943921869241,20.5074901359042,20.103897855129,21.0213816377545,18.5754539600399,16.3396899582246,21.7987419123987,17.7196937345422,19.1358596174717,21.6007629002812,19.3448628713678,19.7902037656276,22.0926553281139,19.9511886480501,18.4459845203855,17.0123014771678,22.8870648950923,18.0619471414996,21.3234063229941,17.4393476642536,19.8979054398638,24.9630936333511,19.2121683070598,27.0069255373598,14.4890135204009,33.218288399248,40.1808871070318,26.9716548217069,34.8534442208834,23.650519233283 | |phase1_expression=16.9757777931082,510.899996784025,535.534104761484,213.237268971315,261.467571031993,240.906755193562,275.429303262125,0,0.84473233291,0.936258105287974,0,0,0,0,4.33042690360362,3.44207954562704,2.79824751251259,1.26184866143295,1.23402990245165,0.42438965179803,39.5451299202474,0,0,338.543966630849,436.10704330869,513.937607882943,377.34750863535,407.456101009016,360.664450128198,236.404261714815,486.920201399049,22.2260735710871,17.8368788399525,31.6963362030877,48.2382204984629,48.7067510900383,49.6131535717557,1.67412652294763,14.0640362014284,4.71171369576418,0,0.683045484958446,0,112.299961634215,110.196724235612,159.502127628501,0.782391344348039,1.74420125104357,4.39372365468944,3.69416808241138,2.51975558925653,1.43752564364972,0.167782606057736,0,0,10.2903774414379,14.3266719969378,78.8978301184487,1.01158230429799,1.5869729378161,0.633831403506179,3.38844532069132,2.66788438833342,1.3498495759221,1.97773272513395,0.7104801149461,2.99600110518405,5.37905627450176,1.55534418462716,1.08004750665353,2.10324961351382,4.28476476605705,5.74258206474195,1.5923803897944,1.15014565221884,0.919218786610021,1.10115880999389,6.89511625660014,2.76491759861238,1.31886287730194,2.37867873366265,2.6045668527838,4.18774498502071,2.8138130501584,5.04234217663473,5.89257170947335,6.12198227436143,2.98239113320481,1.21161909333094,3.09843396437821,230.152404029132,89.4840832060642,140.074094743797,93.3686521533424,83.1713814333016,82.8849741130071,43.8186590811066,0.852151612890289,0,0,56.6190547502256,0,0,0,169.728976152792,181.912383411121,186.538520210455,88.9492423011477,26.1527262483643,24.7898372238257,26.0227990149204,25.2706346999077,21.6778567420695,25.6228488939458,30.1027090267404,26.1386509965725,86.7654336747652,42.8014096482938,9.73071607144862,12.4560474459505,6.18356251689102,9.69750506270444,238.581454359196,5.85561594023094,3.97948742945565,148.420549076192,3.59445373517761,2.39961092397363,3.68503658511888,5.39246301857362,5.94750783664214,1.50785222535437,6.60532416730651,6.39288643325826,6.44142938134636,6.48965052271031,36.1529741668623,25.5034289750691,51.8081654789033,29.8827435358793,9.23855145035196,7.35686734187113,6.30217454318722,9.79581315932148,6.19132142277083,6.79002717509704,8.99536555773397,17.8505325809921,9.48499168904506,10.7790465695657,11.0849208223288,11.1789823538063,25.0242524303038,22.2881386574187,30.4557561883756,43.986572966887,0.702213187313235,0.51469581422943,0,24.8550927042602,27.2050229578072,29.1700539566844,23.4377288229358,28.1372851398787,29.1564843357145,28.6016752043002,30.0466209567573,42.2690539369154,31.5954911833882,49.9069090800449,41.588299297024,44.2985961898757,36.6648692536055,47.643278659932,6.09840850835969,4.52780294468852,296.716067119451,107.631380632063,24.5281488115519,24.8493238890669,24.4848176511977,33.6811486120982,29.3539017875229,50.2195652937156,150.42571250961,83.9964669092455,92.2400216296989,81.3731970648307,94.7525463398924,153.698118879872,142.218836817549,142.585151650127,35.6575653791794,37.3592636233813,33.8123207019241,51.1164832891739,52.9490289967618,47.0611351464037,59.8217641195474,60.5201606716369,65.782466965536,71.2001635828789,74.4096093988744,13.1807633515714,14.9384836286034,13.9414509678609,24.7489348093974,32.3177394068239,42.5225172474971,47.7575588168346,83.8239122426933,85.6631609146814,130.829067939893,94.8959416554684,110.14929860944,72.7427168487682,54.5368137106613,70.919197640415,126.371182073958,21.6020209418353,26.4003261836082,27.6684489813557,40.6014129539109,65.6624529171918,117.593558597691,93.07875002817,81.1820992146884,97.6659281351097,87.8595775302754,105.691837991651,117.425787668809,138.71844717967,6.03165135757089,4.35124547054968,63.4375912194557,78.0900992042393,4.0137647496948,5.62616095642575,0,20.1976741763498,5.36363973007636,7.02789739733949,1.07711698866399,0.716906393857656,0.222798674082394,0.283076530788832,3.23848561339915,5.84511715822624,2.37172666767914,3.85585579706168,57.3437944241405,38.8183015994616,36.3237919358475,65.4931388200966,26.5490276679926,50.9839335925461,55.9298580384789,46.3968496199509,37.7986422887389,46.1152721915891,55.8205113243358,55.6206606100583,45.988161811629,38.8725212261054,32.6797686582496,44.3482835967203,24.1712120085189,15.4852540866927,22.8964870295475,23.3627368184436,23.9409315417069,17.658512942605,25.0114511315224,19.790221692449,55.8518665191631,121.591608675833,51.3831167468061,42.0459945000774,48.6007924354676,41.9174828250683,67.6841190497784,72.2219958878269,128.251568117134,5.7481843623258,7.51831875510552,33.2282857420788,22.5937323391048,11.6788443342908,5.87785179200408,8.00723606222829,27.1965487990168,20.0130576822831,24.8759952847963,114.560474161814,17.7148156405436,40.0539350239892,48.926419392276,58.3356345880368,55.4640911915291,60.4192271803997,69.1809424421062,98.1584782440111,123.65268452037,88.2301824583434,8.45539408026285,45.4530299973696,48.1484207230154,34.4178603368964,44.3018194528618,53.8970040315582,56.8009035045449,69.9197546612012,76.6521807751946,29.9564309824248,27.3628505944972,17.3806116345498,15.0016659314722,11.5036272024607,11.3031115990682,7.16106782669926,7.9472541912506,7.93289966831794,8.27061352177632,12.1159739937777,7.23964663222498,9.37683521772617,9.55087231249574,8.46664206434899,7.71387554398355,51.467797080653,81.0248729815336,66.7471093174499,46.8398079655779,65.1048931888482,49.3604910436609,69.4144655972935,87.2479302851798,67.712234044774,6.21227026878773,5.52390283808612,4.01026859407578,7.38968684077857,3.42541259885321,3.7769694869485,2.70009000092722,5.40385443869065,4.53142408984205,3.62432218226274,2.49089634202024,9.57659696162474,12.6342868258059,21.3933911020099,6.70762120409543,8.27295788025063,20.224452229947,22.0457511245617,19.5760717851007,21.4792629999228,18.2505095920973,19.9943921869241,20.5074901359042,20.103897855129,21.0213816377545,18.5754539600399,16.3396899582246,21.7987419123987,17.7196937345422,19.1358596174717,21.6007629002812,19.3448628713678,19.7902037656276,22.0926553281139,19.9511886480501,18.4459845203855,17.0123014771678,22.8870648950923,18.0619471414996,21.3234063229941,17.4393476642536,19.8979054398638,24.9630936333511,19.2121683070598,27.0069255373598,14.4890135204009,33.218288399248,40.1808871070318,26.9716548217069,34.8534442208834,23.650519233283 | ||
|short_description=p1@F11r | |short_description=p1@F11r | ||
}} | }} |
Revision as of 14:35, 14 November 2012
Short description: | p1@F11r |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_F11r_5end |
Coexpression cluster: | MCL_coexpression_mm9:1408 |
Association with transcript: | 0bp_to_ENSMUST00000144497_5end |
EntrezGene: | F11r |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.57e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.66e-16 | 118 |
endoderm | 3.66e-16 | 118 |
presumptive endoderm | 3.66e-16 | 118 |
digestive system | 2.23e-15 | 116 |
digestive tract | 2.23e-15 | 116 |
primitive gut | 2.23e-15 | 116 |
subdivision of digestive tract | 3.00e-14 | 114 |
trunk | 4.50e-14 | 90 |
trunk region element | 1.48e-13 | 79 |
intestine | 6.18e-13 | 31 |
gastrointestinal system | 1.19e-12 | 47 |
subdivision of trunk | 2.29e-11 | 66 |
mucosa | 2.48e-09 | 15 |
intestinal mucosa | 5.14e-08 | 13 |
wall of intestine | 5.14e-08 | 13 |
gastrointestinal system mucosa | 5.14e-08 | 13 |
epithelial tube | 1.36e-07 | 47 |
organ component layer | 2.91e-07 | 24 |
mesenchyme | 4.43e-07 | 61 |
entire embryonic mesenchyme | 4.43e-07 | 61 |
exocrine gland | 7.38e-07 | 25 |
exocrine system | 7.38e-07 | 25 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.