Personal tools

FFCP PHASE1:Mm9::chr4:59818701..59818786,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 7: Line 7:
|id=chr4:59818701..59818786,+
|id=chr4:59818701..59818786,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.66e-10!75;UBERON:0001016!2.66e-10!75;UBERON:0001017!1.21e-09!73;UBERON:0005743!1.21e-09!73;UBERON:0001049!4.59e-08!52;UBERON:0005068!4.59e-08!52;UBERON:0006241!4.59e-08!52;UBERON:0007135!4.59e-08!52;UBERON:0000955!4.30e-07!50;UBERON:0006238!4.30e-07!50;UBERON:0002616!7.39e-07!49
|ontology_enrichment_uberon=UBERON:0000073!2.66e-10!75;UBERON:0001016!2.66e-10!75;UBERON:0001017!1.21e-09!73;UBERON:0005743!1.21e-09!73;UBERON:0001049!4.59e-08!52;UBERON:0005068!4.59e-08!52;UBERON:0006241!4.59e-08!52;UBERON:0007135!4.59e-08!52;UBERON:0000955!4.30e-07!50;UBERON:0006238!4.30e-07!50;UBERON:0002616!7.39e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.66e-10,75;UBERON:0001017,1.21e-09,73;UBERON:0000073,7.20e-09,54;UBERON:0001049,4.59e-08,52;UBERON:0005068,4.59e-08,52;UBERON:0006241,4.59e-08,52;UBERON:0007135,4.59e-08,52;UBERON:0004121,6.28e-08,95;UBERON:0000924,6.28e-08,95;UBERON:0006601,6.28e-08,95
|phase1_expression=5.92550734287738,0.348975407639361,2.72999543633722,0,1.50268718983904,4.19698179779725,2.80335168714631,6.45616617207881,2.53419699873,4.91535505276186,0.513653904676515,0.558405112967355,5.9920255475922,8.30493822980475,12.3250611871795,11.1361397064404,10.4934281719222,50.3162153746389,59.2334353176792,50.5023685639656,8.84450217571126,22.4397549714001,15.6719873483361,2.71987118748791,5.27641346454491,1.72269589234506,2.58457197695445,1.29282739611533,3.42042155021473,2.01624103807945,1.99557459589774,2.54012269383853,1.84519436275371,0,2.59966457776147,0.997407872150954,3.47087905646027,2.51118978442145,7.813353445238,1.0470474879476,0,0.683045484958446,1.45653105909346,7.30201544258348,7.90740063512214,6.9747765821439,6.25913075478431,3.05235218932625,2.41654801007919,3.69416808241138,4.05960622713551,4.31257693094915,54.5293469687643,8.70434570413613,7.73015738027667,14.663787854049,16.9054729563866,10.8291139378263,13.1505699558739,15.340738398889,13.3104594736298,7.11573517345177,4.4464739805557,17.997994345628,12.8552627133707,21.314403448383,13.7816050838466,5.76327457982332,5.49554945234932,5.53524347159932,5.8890989178387,17.424710048632,18.1112203580323,4.89963196859816,4.69642807989358,6.43453150627015,20.9220173898839,18.7700386985226,17.5111447912118,13.4524013484798,10.5210790142771,11.4600941522487,17.0301629390842,16.8828783009504,19.4053774676549,22.3917724959987,16.7998583342941,18.0807462450542,15.9025005999687,13.8295954995417,10.7249860819621,6.0229671388697,6.11974200336975,7.55584468292944,6.49776417447669,4.48026887097336,5.47733238513832,2.89731548382698,2.59786004602869,3.88673531961374,5.0703631119605,2.56652954828636,10.1922095882658,0,1.73192832808971,2.78695852022608,1.01104889002957,5.709193985953,39.0996204307229,7.86743337043571,5.03107447621794,4.26251669636998,3.92046345335299,3.46662073271032,4.8211369925639,2.63899841792318,24.2251068379686,6.36237170447611,7.96149496754887,11.8089800461609,17.2256384399107,12.6067565815158,5.59175283654366,29.2780797011547,36.0248335719143,1.78819938646014,10.543730956521,5.99902730993408,10.6738990741374,23.2175491077475,25.6200337578431,10.0523481690292,15.6441888173049,16.8772201838018,12.4672826735736,19.7934340942664,11.3041693873851,15.1776504144313,16.4269792981889,9.46988351489133,8.32770834961304,7.81667155073808,5.58192602396583,7.53524089178575,6.39543092022482,6.53379973452734,5.24729657534481,11.1242449417777,4.095791865724,6.61871280587367,7.2139960907219,6.1374805079721,7.78532297831674,5.57203466435466,7.61393904709391,6.17006227137329,8.42655824775882,8.23513302767089,10.2298859782413,8.90640821902658,7.27030785941398,3.78130329068131,6.39210786080068,5.90292695242211,5.24508183817086,8.13868806626427,6.17028823219124,6.42209383019432,5.59503489705834,6.7308660272429,5.6748166682099,6.87139940899062,7.90380415047782,7.38135303182045,19.3466752678997,8.54108282748061,1.65209391491899,1.05780226665418,3.19932375802851,5.57368012465052,6.95884291139304,7.86565746031036,5.33707305227689,3.99473814836374,2.37264530772256,5.92916237006439,7.79139147280835,8.95304124185179,7.01870713628832,1.79763881730844,4.75503709724327,2.78797782556114,5.31070122668629,5.82667414309617,3.38123207019241,7.53509913027663,8.14600446104028,8.13575510727695,10.560501699751,8.41377843483732,8.32093257559286,9.99517027766584,3.85388415213294,6.84064933435986,6.4864468387357,5.17182858485164,8.31726497692862,8.92355491083942,9.16653066413111,12.3709339103849,10.3766545136023,7.68771956926628,14.3768206527355,14.1413560114031,9.36113019343682,9.85057623993736,5.56131981917928,7.71909634181387,14.965008403495,5.87423376488503,5.37784422258685,4.92260748748046,9.62230017982859,12.5629693081362,21.6619713206272,22.2452358557891,14.3447981136634,8.41565820665345,14.3509291791738,14.2561083802692,14.850908440467,17.7918342055259,37.6978209848181,23.3879444042045,9.34352118736169,4.96686143348518,21.5137790583641,24.6144541843627,9.83609672260053,7.32165688892682,7.57219726599016,9.76096860741596,7.53981892064796,9.55875191810208,10.2487390077901,10.190755108398,14.9779959619711,12.2747460322751,13.4397844501818,12.8528526568723,7.66476460124651,9.08134578703002,11.0763132360432,8.24850614862677,9.2921596837974,6.5550771761845,2.72091201268276,5.84675747243284,4.13422650033082,11.9899707698132,8.01127708821486,8.72480950746013,9.62542921638748,11.0612865277536,9.48767477174989,8.25084345985495,20.7668159509811,7.56256594931503,7.1147276080515,10.2881776815164,14.896579625951,16.5883000369926,16.7840001014163,14.0053876592716,24.6405293466896,24.5725202202031,5.07215315526412,8.73897140589844,8.7190790415789,7.72005439080395,10.9822556482886,10.3408766839389,4.95517422270746,22.4364615432717,15.8909919142003,9.08102219038179,9.25972636848558,8.09984365120171,14.3528939107076,16.7008066440762,10.0287273696375,8.6769900440668,12.9907975376158,2.86401185404534,7.11755985557555,6.30290348093231,5.50827238191186,4.59994251231831,5.02233896616208,6.33862428008657,8.18269211680826,4.18809507174447,7.90651337079936,4.34937519160848,1.12738587736838,6.13017838780313,6.12196414691261,8.16694991045,8.52454834953025,7.60302564708502,6.68936260280798,7.03103678157331,6.08184197669123,4.34851417486811,2.59227005632079,10.1123558601017,15.4071163620525,17.9744175038448,18.5786776858247,18.7978030450856,14.9011016085949,13.1013039976766,12.1105412283153,9.38987984517773,12.80274351804,11.5950112907367,9.94070383545475,12.5075394132428,12.739582337791,3.85441652145859,26.6383144048878,14.1747893442972,26.3578847691603,12.3641340180602,8.07034644440082,5.12824547948342,4.93047271881851,6.52043735245972,12.9892923801925,9.66682996665071,11.4579102687879,10.4830441229649,12.3314853558716,15.107877947794,14.1754725048679,15.3109209096235,12.2348450425735,12.4262474820437,6.33102820263478,6.3843979744165,6.4878770186571,9.72426868273176,8.17491334249131,11.2144540154509,8.22312892865976,7.62329711783909,10.5903339165299,9.09709962349671,9.12525479604863,10.7517014590063,10.0196412992774,10.0519489275645,9.18967503289812,7.1444053692461,9.38663040153329,8.29509647993932,13.1867488257058,10.009526569139,6.51451579532289,6.56660482789549,9.0605752179982,9.30217066446903,8.84628175904108,9.05376304440939,8.23175877927476,6.83981249738391,8.82726739998101,11.2228454331548,10.5585166130515,10.5399796141853,11.0492381655816,7.90177890048427,8.68079749415136,10.4920442733937,12.3983752476066,11.1732948105115,7.65153328275374,10.8089795368563,11.5933917810211
|phase1_expression=5.92550734287738,0.348975407639361,2.72999543633722,0,1.50268718983904,4.19698179779725,2.80335168714631,6.45616617207881,2.53419699873,4.91535505276186,0.513653904676515,0.558405112967355,5.9920255475922,8.30493822980475,12.3250611871795,11.1361397064404,10.4934281719222,50.3162153746389,59.2334353176792,50.5023685639656,8.84450217571126,22.4397549714001,15.6719873483361,2.71987118748791,5.27641346454491,1.72269589234506,2.58457197695445,1.29282739611533,3.42042155021473,2.01624103807945,1.99557459589774,2.54012269383853,1.84519436275371,0,2.59966457776147,0.997407872150954,3.47087905646027,2.51118978442145,7.813353445238,1.0470474879476,0,0.683045484958446,1.45653105909346,7.30201544258348,7.90740063512214,6.9747765821439,6.25913075478431,3.05235218932625,2.41654801007919,3.69416808241138,4.05960622713551,4.31257693094915,54.5293469687643,8.70434570413613,7.73015738027667,14.663787854049,16.9054729563866,10.8291139378263,13.1505699558739,15.340738398889,13.3104594736298,7.11573517345177,4.4464739805557,17.997994345628,12.8552627133707,21.314403448383,13.7816050838466,5.76327457982332,5.49554945234932,5.53524347159932,5.8890989178387,17.424710048632,18.1112203580323,4.89963196859816,4.69642807989358,6.43453150627015,20.9220173898839,18.7700386985226,17.5111447912118,13.4524013484798,10.5210790142771,11.4600941522487,17.0301629390842,16.8828783009504,19.4053774676549,22.3917724959987,16.7998583342941,18.0807462450542,15.9025005999687,13.8295954995417,10.7249860819621,6.0229671388697,6.11974200336975,7.55584468292944,6.49776417447669,4.48026887097336,5.47733238513832,2.89731548382698,2.59786004602869,3.88673531961374,5.0703631119605,2.56652954828636,10.1922095882658,0,1.73192832808971,2.78695852022608,1.01104889002957,5.709193985953,39.0996204307229,7.86743337043571,5.03107447621794,4.26251669636998,3.92046345335299,3.46662073271032,4.8211369925639,2.63899841792318,24.2251068379686,6.36237170447611,7.96149496754887,11.8089800461609,17.2256384399107,12.6067565815158,5.59175283654366,29.2780797011547,36.0248335719143,1.78819938646014,10.543730956521,5.99902730993408,10.6738990741374,23.2175491077475,25.6200337578431,10.0523481690292,15.6441888173049,16.8772201838018,12.4672826735736,19.7934340942664,11.3041693873851,15.1776504144313,16.4269792981889,9.46988351489133,8.32770834961304,7.81667155073808,5.58192602396583,7.53524089178575,6.39543092022482,6.53379973452734,5.24729657534481,11.1242449417777,4.095791865724,6.61871280587367,7.2139960907219,6.1374805079721,7.78532297831674,5.57203466435466,7.61393904709391,6.17006227137329,8.42655824775882,8.23513302767089,10.2298859782413,8.90640821902658,7.27030785941398,3.78130329068131,6.39210786080068,5.90292695242211,5.24508183817086,8.13868806626427,6.17028823219124,6.42209383019432,5.59503489705834,6.7308660272429,5.6748166682099,6.87139940899062,7.90380415047782,7.38135303182045,19.3466752678997,8.54108282748061,1.65209391491899,1.05780226665418,3.19932375802851,5.57368012465052,6.95884291139304,7.86565746031036,5.33707305227689,3.99473814836374,2.37264530772256,5.92916237006439,7.79139147280835,8.95304124185179,7.01870713628832,1.79763881730844,4.75503709724327,2.78797782556114,5.31070122668629,5.82667414309617,3.38123207019241,7.53509913027663,8.14600446104028,8.13575510727695,10.560501699751,8.41377843483732,8.32093257559286,9.99517027766584,3.85388415213294,6.84064933435986,6.4864468387357,5.17182858485164,8.31726497692862,8.92355491083942,9.16653066413111,12.3709339103849,10.3766545136023,7.68771956926628,14.3768206527355,14.1413560114031,9.36113019343682,9.85057623993736,5.56131981917928,7.71909634181387,14.965008403495,5.87423376488503,5.37784422258685,4.92260748748046,9.62230017982859,12.5629693081362,21.6619713206272,22.2452358557891,14.3447981136634,8.41565820665345,14.3509291791738,14.2561083802692,14.850908440467,17.7918342055259,37.6978209848181,23.3879444042045,9.34352118736169,4.96686143348518,21.5137790583641,24.6144541843627,9.83609672260053,7.32165688892682,7.57219726599016,9.76096860741596,7.53981892064796,9.55875191810208,10.2487390077901,10.190755108398,14.9779959619711,12.2747460322751,13.4397844501818,12.8528526568723,7.66476460124651,9.08134578703002,11.0763132360432,8.24850614862677,9.2921596837974,6.5550771761845,2.72091201268276,5.84675747243284,4.13422650033082,11.9899707698132,8.01127708821486,8.72480950746013,9.62542921638748,11.0612865277536,9.48767477174989,8.25084345985495,20.7668159509811,7.56256594931503,7.1147276080515,10.2881776815164,14.896579625951,16.5883000369926,16.7840001014163,14.0053876592716,24.6405293466896,24.5725202202031,5.07215315526412,8.73897140589844,8.7190790415789,7.72005439080395,10.9822556482886,10.3408766839389,4.95517422270746,22.4364615432717,15.8909919142003,9.08102219038179,9.25972636848558,8.09984365120171,14.3528939107076,16.7008066440762,10.0287273696375,8.6769900440668,12.9907975376158,2.86401185404534,7.11755985557555,6.30290348093231,5.50827238191186,4.59994251231831,5.02233896616208,6.33862428008657,8.18269211680826,4.18809507174447,7.90651337079936,4.34937519160848,1.12738587736838,6.13017838780313,6.12196414691261,8.16694991045,8.52454834953025,7.60302564708502,6.68936260280798,7.03103678157331,6.08184197669123,4.34851417486811,2.59227005632079,10.1123558601017,15.4071163620525,17.9744175038448,18.5786776858247,18.7978030450856,14.9011016085949,13.1013039976766,12.1105412283153,9.38987984517773,12.80274351804,11.5950112907367,9.94070383545475,12.5075394132428,12.739582337791,3.85441652145859,26.6383144048878,14.1747893442972,26.3578847691603,12.3641340180602,8.07034644440082,5.12824547948342,4.93047271881851,6.52043735245972,12.9892923801925,9.66682996665071,11.4579102687879,10.4830441229649,12.3314853558716,15.107877947794,14.1754725048679,15.3109209096235,12.2348450425735,12.4262474820437,6.33102820263478,6.3843979744165,6.4878770186571,9.72426868273176,8.17491334249131,11.2144540154509,8.22312892865976,7.62329711783909,10.5903339165299,9.09709962349671,9.12525479604863,10.7517014590063,10.0196412992774,10.0519489275645,9.18967503289812,7.1444053692461,9.38663040153329,8.29509647993932,13.1867488257058,10.009526569139,6.51451579532289,6.56660482789549,9.0605752179982,9.30217066446903,8.84628175904108,9.05376304440939,8.23175877927476,6.83981249738391,8.82726739998101,11.2228454331548,10.5585166130515,10.5399796141853,11.0492381655816,7.90177890048427,8.68079749415136,10.4920442733937,12.3983752476066,11.1732948105115,7.65153328275374,10.8089795368563,11.5933917810211
|short_description=p1@Snx30
|short_description=p1@Snx30
}}
}}

Revision as of 15:24, 14 November 2012

Short description:p1@Snx30
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Snx30_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000030080, ENSMUST00000123665_5end
EntrezGene:Snx30
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Snx30

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.20
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.80
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.46
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.53
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.92
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.56
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.99
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E88.30
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A112.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A311.14
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A510.49
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A250.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A459.23
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A650.50
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.84
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H222.44
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I915.67
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.72
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.28
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I12.58
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B93.42
Ileum epithelium, pool2.CNhs13232.10253-104C12.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.60
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H17.81
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D87.30
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.97
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.05
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.42
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.69
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.06
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A254.53
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I98.70
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.73
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C114.66
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E116.91
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C510.83
Mouse Granule cells, donor1.CNhs12131.11713-123C313.15
Mouse Granule cells, donor2.CNhs12357.11731-123E315.34
Mouse Granule cells, donor3.CNhs12108.11636-122C713.31
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.12
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C718.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E712.86
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D221.31
Mouse Microglia, donor1.CNhs12629.11718-123C813.78
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.50
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F117.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D518.11
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.90
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.70
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D320.92
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F318.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D717.51
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D413.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.52
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.46
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E417.03
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E516.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I619.41
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D622.39
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F616.80
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E118.08
Mouse Schwann, donor1.CNhs12507.11728-123D915.90
Mouse Schwann, donor2.CNhs12573.11746-123F913.83
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G310.72
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.02
Mouse hepatocyte, donor1.CNhs13078.11714-123C46.12
Mouse hepatocyte, donor3.CNhs12615.11637-122C87.56
Mouse hepatocyte, donor6.CNhs13090.11822-124F46.50
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.48
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.48
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.89
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.07
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.73
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.71
accessory axillary lymph node, adult.CNhs10475.1063-29H939.10
adrenal gland, adult.CNhs10508.49-24D77.87
adrenal gland, embryo E14.CNhs11038.406-44C55.03
adrenal gland, embryo E16.CNhs11004.1254-43D64.26
adrenal gland, embryo E17.CNhs11043.1263-45I13.92
adrenal gland, embryo E18.CNhs11026.1262-18F53.47
adrenal gland, neonate N00.CNhs11191.1311-23C14.82
adrenal gland, neonate N25.CNhs11223.1377-27I32.64
amnion, adult pregnant day17.5.CNhs10488.583-22A824.23
aorta, adult.CNhs10498.46-23H16.36
bone (os femoris), adult.CNhs10483.56-12G27.96
bone (os femoris), neonate N02.CNhs11227.1985-43F511.81
bone (os femoris), neonate N16.CNhs11225.1525-43A617.23
bone (os femoris), neonate N20.CNhs11195.1350-25C312.61
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B229.28
cerebellum, neonate N30.CNhs11135.1395-42I236.02
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C710.54
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D16.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D410.67
corpora quadrigemina, adult.CNhs10501.16-22A423.22
corpus striatum, adult.CNhs10487.19-21D825.62
corpus striatum, neonate N00.CNhs11226.630-43F110.05
cortex, adult.CNhs10473.12-14D515.64
cortex, neonate N30.CNhs11107.1392-42F216.88
diencephalon, adult.CNhs10482.20-12F212.47
diencephalon, neonate N30.CNhs11201.1388-42B219.79
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B111.30
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A215.18
epididymis, adult.CNhs10490.58-23B216.43
eyeball, adult.CNhs10484.31-12G49.47
eyeball, embryo E12.CNhs11016.345-16C68.33
eyeball, embryo E14.CNhs10521.399-16E27.82
eyeball, embryo E15.CNhs10593.426-16C95.58
eyeball, embryo E17.CNhs11023.1261-18D47.54
eyeball, neonate N00.CNhs11207.633-15C66.40
eyeball, neonate N01.CNhs11140.1532-43E76.53
eyeball, neonate N02.CNhs11205.1551-44G85.25
eyeball, neonate N16.CNhs11188.777-19A211.12
forelimb, embryo E11.CNhs10596.335-25E24.10
forelimb, embryo E12.CNhs10600.359-14H26.62
forelimb, embryo E13.CNhs10589.384-1E27.21
forelimb, embryo E14.CNhs10577.413-26A86.14
forelimb, embryo E15.CNhs11007.437-20E77.79
forelimb, embryo E17.CNhs10598.1517-43C45.57
forelimb, embryo E18.CNhs11008.1520-43B57.61
gonad, embryo E13.CNhs11044.1564-45I66.17
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C88.43
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D28.24
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D510.23
heart, embryo E11.CNhs10586.331-24E98.91
heart, embryo E12.CNhs11015.353-12F57.27
heart, embryo E13.CNhs11013.376-3I93.78
heart, embryo E14.CNhs10597.403-26D46.39
heart, embryo E15.CNhs11017.431-16C85.90
heart, embryo E16.CNhs11021.457-17C65.25
heart, embryo E17.CNhs11025.479-18E58.14
heart, embryo E18.CNhs11030.1283-20G36.17
heart, neonate N00.CNhs11213.639-21E36.42
heart, neonate N03.CNhs11221.1349-25I25.60
heart, neonate N10.CNhs11118.749-24G16.73
heart, neonate N16.CNhs11209.782-15G15.67
heart, neonate N20.CNhs11127.821-26I66.87
heart, neonate N25.CNhs11196.1351-25D37.90
heart, neonate N30.CNhs11202.1390-42D27.38
hippocampus, adult.CNhs10478.13-16E819.35
hippocampus, neonate N00.CNhs11228.627-43G18.54
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I53.20
intestine, embryo E13.CNhs11010.381-16D55.57
intestine, embryo E15.CNhs10602.976-16D86.96
intestine, embryo E16.CNhs10585.463-22H47.87
intestine, embryo E17.CNhs10582.482-18D35.34
intestine, embryo E18.CNhs10526.1289-20F73.99
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E95.93
intestine, neonate N06.CNhs11102.688-20B87.79
intestine, neonate N07.CNhs11095.720-20F28.95
intestine, neonate N10.CNhs11098.755-23A57.02
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E34.76
intestine, neonate N30.CNhs11131.1384-42G12.79
kidney, embryo E14.CNhs10606.411-4I95.31
kidney, embryo E15.CNhs10997.434-16F85.83
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I27.54
kidney, embryo E18.CNhs11001.1288-20C78.15
kidney, neonate N00.CNhs11214.646-21G78.14
kidney, neonate N10.CNhs11206.758-6D510.56
kidney, neonate N20.CNhs11113.832-19I18.41
kidney, neonate N25.CNhs11122.1353-25F38.32
kidney, neonate N30.CNhs11203.1385-42H110.00
liver, adult pregnant day01.CNhs10466.508-5B23.85
liver, embryo E12.CNhs10601.355-15F86.84
liver, embryo E13.CNhs10524.378-3H66.49
liver, embryo E14.CNhs10594.409-16E15.17
liver, embryo E15.CNhs10520.433-16D78.32
liver, embryo E16.CNhs10523.462-17F58.92
liver, embryo E17.CNhs10510.481-18A39.17
liver, embryo E18.CNhs10579.499-43G412.37
liver, neonate N00.CNhs11117.641-24F410.38
liver, neonate N03.CNhs11123.1345-25G27.69
liver, neonate N06.CNhs11101.684-20A814.38
liver, neonate N07.CNhs11103.716-20H214.14
liver, neonate N10.CNhs11115.751-24B99.36
liver, neonate N20.CNhs11220.823-25A39.85
liver, neonate N25.CNhs11198.1368-26H15.56
liver, neonate N30.CNhs11106.1382-42D17.72
lung, adult.CNhs10474.28-22B114.97
lung, embryo E12.CNhs10522.354-16G25.87
lung, embryo E14.CNhs10604.404-26F85.38
lung, embryo E15.CNhs11020.432-17C54.92
lung, embryo E16.CNhs10998.458-17B69.62
lung, embryo E17.CNhs10605.480-44A612.56
lung, embryo E18.CNhs10583.1287-20I621.66
lung, neonate N00.CNhs11224.640-42C622.25
lung, neonate N06.CNhs11212.683-20E514.34
lung, neonate N07.CNhs11111.715-19A38.42
lung, neonate N10.CNhs11219.750-23E614.35
lung, neonate N20.CNhs11109.822-18A414.26
lung, neonate N25.CNhs11119.1359-25C714.85
lung, neonate N30.CNhs11133.1394-42H217.79
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A137.70
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A123.39
mammary gland, adult lactating day02.CNhs10480.595-22B69.34
mammary gland, adult pregnant day19.CNhs10476.588-5H24.97
medulla oblongata, adult.CNhs10477.17-12C221.51
medulla oblongata, neonate N30.CNhs11200.1396-42A324.61
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C79.84
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.32
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.57
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E29.76
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.54
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D79.56
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D810.25
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D910.19
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D414.98
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D512.27
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D613.44
olfactory brain, adult.CNhs10489.18-22I912.85
ovary, adult.CNhs10507.91-2I77.66
ovary, embryo E18.CNhs11040.505-44H79.08
ovary, neonate N00.CNhs11217.1299-22I411.08
oviduct, adult pregnant day01.CNhs10500.988-6G68.25
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F46.56
pancreas, embryo E15.CNhs11042.1556-45F22.72
pancreas, embryo E16.CNhs11003.460-26E55.85
pancreas, embryo E17.CNhs10599.1558-45G34.13
pancreas, embryo E18.CNhs10580.1535-43I711.99
pancreas, neonate N00.CNhs11105.645-26G98.01
pancreas, neonate N01.CNhs11138.1531-43D78.72
pancreas, neonate N02.CNhs11139.1539-43D89.63
pancreas, neonate N16.CNhs11136.787-43B611.06
pancreas, neonate N25.CNhs11094.1555-45E29.49
pancreas, neonate N30.CNhs11182.1548-44H58.25
pituitary gland, adult.CNhs10493.21-1G820.77
pituitary gland, embryo E12.CNhs11018.346-16E67.56
pituitary gland, embryo E13.CNhs11009.370-44C77.11
pituitary gland, embryo E14.CNhs11037.398-44A510.29
pituitary gland, embryo E15.CNhs10592.427-16B914.90
pituitary gland, embryo E16.CNhs11036.449-43F616.59
pituitary gland, embryo E17.CNhs11039.1265-44F516.78
pituitary gland, neonate N00.CNhs11190.1308-22E914.01
placenta, adult pregnant day10.CNhs10472.539-13I724.64
placenta, adult pregnant day17.CNhs10464.577-18G324.57
prostate, adult.CNhs10470.859-1F85.07
skin, adult.CNhs10492.30-1C38.74
skin, neonate N00.CNhs11124.650-25G48.72
skin, neonate N03.CNhs11215.662-22H37.72
skin, neonate N06.CNhs11097.693-20I510.98
skin, neonate N10.CNhs11108.762-6C410.34
small intestine, neonate N16.CNhs11114.790-21I14.96
spinal cord, adult.CNhs10505.24-13C922.44
spleen, adult.CNhs10465.25-2G215.89
spleen, embryo E16.CNhs11035.461-43C19.08
spleen, embryo E18.CNhs11011.1271-21F29.26
spleen, neonate N10.CNhs11116.752-24D18.10
spleen, neonate N20.CNhs11112.824-19H114.35
spleen, neonate N25.CNhs11099.1354-25G316.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C610.03
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C98.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D312.99
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E37.12
stomach, embryo E15.CNhs10603.1252-16G86.30
stomach, embryo E16.CNhs11022.459-17D45.51
stomach, embryo E17.CNhs11006.1035-18D54.60
stomach, embryo E18.CNhs10999.1286-20C65.02
stomach, neonate N03.CNhs11193.1340-24B86.34
stomach, neonate N07.CNhs11210.718-18A98.18
stomach, neonate N25.CNhs11104.1355-25E44.19
stomach, neonate N30.CNhs11134.1386-42I17.91
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F56.13
testis, embryo E15.CNhs11034.443-27C56.12
testis, embryo E16.CNhs11033.470-26G58.17
testis, embryo E17.CNhs11029.486-18I58.52
testis, embryo E18.CNhs11027.503-18G57.60
testis, neonate N00.CNhs11189.1300-22B76.69
testis, neonate N07.CNhs11222.726-26I47.03
testis, neonate N10.CNhs11204.763-44D96.08
testis, neonate N20.CNhs11110.839-18H34.35
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B510.11
thymus, embryo E14.CNhs11041.402-44I415.41
thymus, embryo E15.CNhs11005.430-45I217.97
thymus, embryo E16.CNhs11002.456-26C518.58
thymus, embryo E17.CNhs10581.478-18C118.80
thymus, embryo E18.CNhs10595.1273-19G414.90
thymus, neonate N02.CNhs11181.1541-43F813.10
thymus, neonate N03.CNhs11137.2104-43C712.11
thymus, neonate N06.CNhs11197.681-26C49.39
thymus, neonate N07.CNhs11211.713-19D312.80
thymus, neonate N10.CNhs11194.748-24E411.60
thymus, neonate N20.CNhs11186.820-7A29.94
thymus, neonate N25.CNhs11125.1362-25G712.51
thymus, neonate N30.CNhs11132.1393-42G212.74
tongue, adult.CNhs10499.32-1B43.85
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H326.64
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F714.17
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G526.36
urinary bladder, adult.CNhs10481.879-12E412.36
uterus, adult pregnant day19.CNhs10497.590-15F58.07
uterus, adult.CNhs10509.92-27E55.13
vagina, adult.CNhs10502.89-27D54.93
vesicular gland, adult.CNhs10491.51-27F86.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.99
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.67
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A311.46
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.48
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A412.33
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.11
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.18
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A715.31
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A812.23
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.43
whole body, embryo E11.CNhs11014.324-5I86.33
whole body, embryo E12.CNhs10587.857-27C96.38
whole body, embryo E13.CNhs10512.372-23H26.49
whole body, embryo E14.5.CNhs10578.420-27D29.72
whole body, embryo E14.CNhs10519.395-14B18.17
whole body, embryo E16.CNhs10514.453-14F211.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G510.59
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.10
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.13
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.02
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G510.05
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.19
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.30
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G513.19
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G510.01
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.51
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G59.06
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.30
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.05
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.23
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.83
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G511.22
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G510.56
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G510.54
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.90
whole body, embryo E17.5.CNhs10513.490-9F98.68
whole body, embryo E17.CNhs10517.475-3I510.49
whole body, embryo E18.CNhs10516.493-3B312.40
whole body, neonate N00.CNhs10525.657-19C211.17
whole body, neonate N01.CNhs10576.659-23C67.65
whole body, neonate N06.CNhs10515.692-21D110.81
whole body, neonate N10.CNhs10518.761-6B411.59





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system2.66e-1075
central nervous system1.21e-0973
regional part of nervous system7.20e-0954
neural tube4.59e-0852
neural rod4.59e-0852
future spinal cord4.59e-0852
neural keel4.59e-0852
ectoderm-derived structure6.28e-0895
ectoderm6.28e-0895
presumptive ectoderm6.28e-0895







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:59818701..59818786,%2B&oldid=2327063"