Personal tools

FFCP PHASE1:Mm9::chr19:4397052..4397098,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|id=chr19:4397052..4397098,-
|id=chr19:4397052..4397098,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=
|phase1_expression=34.9124486688451,102.598769845972,106.469822017151,69.8692328118777,96.1719801496987,45.663161960034,25.9310031061034,27.2450212461726,21.6814632113567,15.2141942109296,11.6428218393343,12.3646846442771,28.5905218985114,26.4883819329562,17.9879271380458,24.0945568193893,22.3859801001007,27.4452083861667,34.5528372686462,30.9804445812562,23.7270779521485,20.751808800985,13.8435888243636,25.9187724925319,27.5291137280604,62.0170521244222,55.1375355083616,45.0334876313508,23.9429508515031,41.3329412806286,23.7251646401176,16.5107975099504,17.8368788399525,0,16.1756907060714,16.1247605997738,23.0711372576477,66.5465292871683,61.7254922173802,58.1111355810916,85.2935657644971,96.9924588640993,69.9134908364861,21.4024590558481,19.8698785190249,25.8800920547971,5.47673941043627,5.45062890951116,8.78744730937887,6.22175677037707,6.85933465964276,4.31257693094915,37.0799559387597,28.2891235384424,34.2815675125313,13.1202312378333,17.1920063963254,13.9231464914909,18.8154308599426,16.398720357433,5.07065122804943,9.82649143000483,7.11435836888911,9.89889689009539,12.8552627133707,11.3676818391376,10.1864037576258,5.76327457982332,25.611334240194,18.4958135514416,18.2982716375702,7.7125765789027,9.49734726091938,17.1487118900936,16.9646483702278,11.9498442259303,13.2139057199266,15.9609172606485,18.8936035905179,18.5959665699573,13.5401712531566,22.9201883044974,10.8881369610539,12.380777420697,16.8078072554491,13.258286346315,12.8134512719193,20.1311401491325,14.0093457666391,13.8295954995417,17.102004833399,12.0459342777394,17.6792546764015,13.4925797909454,9.09686984426737,13.4408066129201,17.555552516469,26.9279909673331,19.2241643406123,19.7870161725791,30.7038655113164,29.5150898052931,20.3844191765317,35.5533351576666,5.84525810730278,11.1478340809043,6.0662933401774,25.2346374179123,12.1700805314171,21.8209944425292,18.5629299639765,14.3098774806706,20.5247792557892,22.6083960828934,22.4594430629196,23.24831939599,25.7082766443749,22.2683009656664,14.153768831198,27.1768307911647,29.3719219552323,25.6983884161668,16.775258509631,31.9131068742586,41.0515545354372,36.0194447844114,22.7648736561249,9.59844369589452,23.1267813272978,17.5255048103643,11.8950156732843,24.6282530141214,17.5562563394199,23.7815375317207,15.1685272528479,17.6842976743856,28.005825058837,26.6230917105599,14.1524744722858,29.2514179682199,24.0722819481002,22.7603083389138,19.9868964083938,30.140963567143,37.4200745332303,38.4341160854549,44.4146174413115,29.4921842642478,16.5987354558289,24.9620025821521,28.5040821145597,22.3579647076126,30.8632446640414,31.6909471535172,28.6037169607041,25.8744546864041,7.02213187313235,6.69104558498259,14.4923384691752,22.9909607514407,17.5894544985822,18.1862682075625,24.8581972364471,26.7599355176469,25.1455394006427,21.8581908065383,29.2418007525585,22.068649707395,24.1902979372816,22.1626076506779,28.4551521505954,29.3861974724918,20.6377108373588,21.3388205828991,17.2437757822584,23.4622516224768,70.0487819925652,26.709507233018,21.1155368029882,28.3328739669735,22.5518057313663,22.5885547578144,22.0154263406422,26.0609107774206,41.758557415917,20.5873693405014,32.1709067264345,30.0424272782138,31.5841821132975,33.2563181202062,31.9884313814547,45.005927755487,13.0870851657626,23.0781995471652,22.5415471346161,23.6235540300565,26.9593957163,26.862019017992,30.6064839681405,23.6176236767363,21.8228231699511,21.1009150306279,12.4510103376603,20.6887931087957,21.6214894624523,18.2138311031732,25.3575151735629,27.4941962117755,27.4995919923933,26.1803485080238,21.0775794807546,18.1210532704134,35.9420516318386,27.9105710751378,24.3389385029357,19.1959947239805,18.298536179235,19.2977408545347,23.6484083413254,21.9810037653762,26.2373612071662,22.2366062365496,24.1730955737157,31.3236701416195,24.0424077294874,34.1483883751148,28.5319610832206,33.6626328266138,37.631325403167,33.4281162020105,31.9467216451907,32.5460381808401,15.0791283939272,14.6854534631052,19.6705709207614,24.0064969285117,14.9312048688647,19.4571399743057,24.9181116972547,28.2767438468898,16.0909191902291,15.6175497718655,26.2816545234015,19.5954414321093,24.9534514972281,26.6091938941502,19.4309136803949,21.0424217696145,22.9266911208984,27.6336332122754,20.0135520143659,25.6414469280848,29.1567657242901,23.7556977080451,18.5843193675948,18.9368896200886,16.3254720760966,19.2377181351016,14.4697927511579,22.1353306519628,34.6293912845416,22.9026249570828,19.9638531895444,28.1272714562876,24.2462799722497,17.5330423521918,20.0859367394735,26.10885863454,23.2845630808958,32.1505552547388,28.7291178500483,34.2468129795975,31.4288629350051,26.4884505729701,18.5390649370331,19.9122146611991,18.7449138346718,31.9879330706471,31.3240987790057,39.5049658279421,37.2441713289786,38.7372523398345,41.098797964809,15.9465759729038,22.8966980269123,29.9260958546673,32.0386532349601,31.4575323197834,28.4323993659732,35.2318386738045,21.5872606092196,25.8910186798767,24.1849954157742,10.5013767981662,21.5108475635172,27.4481280621246,28.0813886136683,30.317802922098,21.6178938108716,22.5223458462651,31.4083131756277,23.8197907205467,26.5710695248175,23.6108938973032,15.2197093444731,26.3149121037403,21.6750622498798,30.5288365700155,26.2194441659794,28.7225413334323,27.3442366044607,22.2649498083155,27.9974449616648,28.5069262574687,27.3628505944972,28.1249897359079,21.8943232513377,19.001527075493,22.2164607292029,25.9588708717848,28.0140710241584,32.4527713703916,34.5593493588511,34.0256936325258,38.7892645873949,35.8941219087152,40.6399362684768,48.1059208201647,51.776467666435,29.4749498699775,19.7567498502918,13.4570784914214,11.4161539127573,19.8985281853156,21.7711671523371,26.7401371430207,33.4414671363343,19.5613120573792,11.2950368523413,11.0478056761722,9.73922372846974,11.8578695817144,12.3314853558716,9.82012066606611,18.2256075062588,14.8605997063993,13.5942722695261,18.1216109113137,24.2862393346973,22.3453929104577,21.0002335077585,25.5262052921709,20.9613162627982,25.921934691452,17.335244768526,21.2216108956061,22.4643446714271,25.5224183881435,17.7435509923168,19.805765845538,25.8450560616875,23.0490548657529,27.0521058780939,25.719859329286,26.0739733375925,30.8654752741928,21.0163809409686,23.2574293812348,22.286501405052,24.1367096376699,30.5198323132571,23.1100802445402,21.927485636772,24.3690070728028,21.9513567447327,19.7302283578382,26.8892145414806,18.5176949647054,25.0319888242007,27.8767685122845,18.8246279858057,28.5083787782177,24.8849528165672,18.2361721894701,22.6913660192046,23.4209448912645,21.0417165275728,28.4562930664175,16.2307484934295
|phase1_expression=34.9124486688451,102.598769845972,106.469822017151,69.8692328118777,96.1719801496987,45.663161960034,25.9310031061034,27.2450212461726,21.6814632113567,15.2141942109296,11.6428218393343,12.3646846442771,28.5905218985114,26.4883819329562,17.9879271380458,24.0945568193893,22.3859801001007,27.4452083861667,34.5528372686462,30.9804445812562,23.7270779521485,20.751808800985,13.8435888243636,25.9187724925319,27.5291137280604,62.0170521244222,55.1375355083616,45.0334876313508,23.9429508515031,41.3329412806286,23.7251646401176,16.5107975099504,17.8368788399525,0,16.1756907060714,16.1247605997738,23.0711372576477,66.5465292871683,61.7254922173802,58.1111355810916,85.2935657644971,96.9924588640993,69.9134908364861,21.4024590558481,19.8698785190249,25.8800920547971,5.47673941043627,5.45062890951116,8.78744730937887,6.22175677037707,6.85933465964276,4.31257693094915,37.0799559387597,28.2891235384424,34.2815675125313,13.1202312378333,17.1920063963254,13.9231464914909,18.8154308599426,16.398720357433,5.07065122804943,9.82649143000483,7.11435836888911,9.89889689009539,12.8552627133707,11.3676818391376,10.1864037576258,5.76327457982332,25.611334240194,18.4958135514416,18.2982716375702,7.7125765789027,9.49734726091938,17.1487118900936,16.9646483702278,11.9498442259303,13.2139057199266,15.9609172606485,18.8936035905179,18.5959665699573,13.5401712531566,22.9201883044974,10.8881369610539,12.380777420697,16.8078072554491,13.258286346315,12.8134512719193,20.1311401491325,14.0093457666391,13.8295954995417,17.102004833399,12.0459342777394,17.6792546764015,13.4925797909454,9.09686984426737,13.4408066129201,17.555552516469,26.9279909673331,19.2241643406123,19.7870161725791,30.7038655113164,29.5150898052931,20.3844191765317,35.5533351576666,5.84525810730278,11.1478340809043,6.0662933401774,25.2346374179123,12.1700805314171,21.8209944425292,18.5629299639765,14.3098774806706,20.5247792557892,22.6083960828934,22.4594430629196,23.24831939599,25.7082766443749,22.2683009656664,14.153768831198,27.1768307911647,29.3719219552323,25.6983884161668,16.775258509631,31.9131068742586,41.0515545354372,36.0194447844114,22.7648736561249,9.59844369589452,23.1267813272978,17.5255048103643,11.8950156732843,24.6282530141214,17.5562563394199,23.7815375317207,15.1685272528479,17.6842976743856,28.005825058837,26.6230917105599,14.1524744722858,29.2514179682199,24.0722819481002,22.7603083389138,19.9868964083938,30.140963567143,37.4200745332303,38.4341160854549,44.4146174413115,29.4921842642478,16.5987354558289,24.9620025821521,28.5040821145597,22.3579647076126,30.8632446640414,31.6909471535172,28.6037169607041,25.8744546864041,7.02213187313235,6.69104558498259,14.4923384691752,22.9909607514407,17.5894544985822,18.1862682075625,24.8581972364471,26.7599355176469,25.1455394006427,21.8581908065383,29.2418007525585,22.068649707395,24.1902979372816,22.1626076506779,28.4551521505954,29.3861974724918,20.6377108373588,21.3388205828991,17.2437757822584,23.4622516224768,70.0487819925652,26.709507233018,21.1155368029882,28.3328739669735,22.5518057313663,22.5885547578144,22.0154263406422,26.0609107774206,41.758557415917,20.5873693405014,32.1709067264345,30.0424272782138,31.5841821132975,33.2563181202062,31.9884313814547,45.005927755487,13.0870851657626,23.0781995471652,22.5415471346161,23.6235540300565,26.9593957163,26.862019017992,30.6064839681405,23.6176236767363,21.8228231699511,21.1009150306279,12.4510103376603,20.6887931087957,21.6214894624523,18.2138311031732,25.3575151735629,27.4941962117755,27.4995919923933,26.1803485080238,21.0775794807546,18.1210532704134,35.9420516318386,27.9105710751378,24.3389385029357,19.1959947239805,18.298536179235,19.2977408545347,23.6484083413254,21.9810037653762,26.2373612071662,22.2366062365496,24.1730955737157,31.3236701416195,24.0424077294874,34.1483883751148,28.5319610832206,33.6626328266138,37.631325403167,33.4281162020105,31.9467216451907,32.5460381808401,15.0791283939272,14.6854534631052,19.6705709207614,24.0064969285117,14.9312048688647,19.4571399743057,24.9181116972547,28.2767438468898,16.0909191902291,15.6175497718655,26.2816545234015,19.5954414321093,24.9534514972281,26.6091938941502,19.4309136803949,21.0424217696145,22.9266911208984,27.6336332122754,20.0135520143659,25.6414469280848,29.1567657242901,23.7556977080451,18.5843193675948,18.9368896200886,16.3254720760966,19.2377181351016,14.4697927511579,22.1353306519628,34.6293912845416,22.9026249570828,19.9638531895444,28.1272714562876,24.2462799722497,17.5330423521918,20.0859367394735,26.10885863454,23.2845630808958,32.1505552547388,28.7291178500483,34.2468129795975,31.4288629350051,26.4884505729701,18.5390649370331,19.9122146611991,18.7449138346718,31.9879330706471,31.3240987790057,39.5049658279421,37.2441713289786,38.7372523398345,41.098797964809,15.9465759729038,22.8966980269123,29.9260958546673,32.0386532349601,31.4575323197834,28.4323993659732,35.2318386738045,21.5872606092196,25.8910186798767,24.1849954157742,10.5013767981662,21.5108475635172,27.4481280621246,28.0813886136683,30.317802922098,21.6178938108716,22.5223458462651,31.4083131756277,23.8197907205467,26.5710695248175,23.6108938973032,15.2197093444731,26.3149121037403,21.6750622498798,30.5288365700155,26.2194441659794,28.7225413334323,27.3442366044607,22.2649498083155,27.9974449616648,28.5069262574687,27.3628505944972,28.1249897359079,21.8943232513377,19.001527075493,22.2164607292029,25.9588708717848,28.0140710241584,32.4527713703916,34.5593493588511,34.0256936325258,38.7892645873949,35.8941219087152,40.6399362684768,48.1059208201647,51.776467666435,29.4749498699775,19.7567498502918,13.4570784914214,11.4161539127573,19.8985281853156,21.7711671523371,26.7401371430207,33.4414671363343,19.5613120573792,11.2950368523413,11.0478056761722,9.73922372846974,11.8578695817144,12.3314853558716,9.82012066606611,18.2256075062588,14.8605997063993,13.5942722695261,18.1216109113137,24.2862393346973,22.3453929104577,21.0002335077585,25.5262052921709,20.9613162627982,25.921934691452,17.335244768526,21.2216108956061,22.4643446714271,25.5224183881435,17.7435509923168,19.805765845538,25.8450560616875,23.0490548657529,27.0521058780939,25.719859329286,26.0739733375925,30.8654752741928,21.0163809409686,23.2574293812348,22.286501405052,24.1367096376699,30.5198323132571,23.1100802445402,21.927485636772,24.3690070728028,21.9513567447327,19.7302283578382,26.8892145414806,18.5176949647054,25.0319888242007,27.8767685122845,18.8246279858057,28.5083787782177,24.8849528165672,18.2361721894701,22.6913660192046,23.4209448912645,21.0417165275728,28.4562930664175,16.2307484934295
|short_description=p1@Kdm2a
|short_description=p1@Kdm2a
}}
}}

Revision as of 23:31, 14 November 2012

Short description:p1@Kdm2a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Kdm2a_5end
Coexpression cluster:MCL_coexpression_mm9:163
Association with transcript: 0bp_to_ENSMUST00000075856, NM_001001984, uc008fzw.1, uc008fzy.1, uc008fzz.1_5end
EntrezGene:Kdm2a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Kdm2a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G734.91
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5102.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6106.47
CD326+ enterocyte, pool1.CNhs13542.11848-124I369.87
CD326+ enterocyte, pool2.CNhs13197.11849-124I496.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I745.66
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I825.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E927.25
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E721.68
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F215.21
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E611.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F112.36
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E428.59
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E826.49
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A117.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A324.09
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A522.39
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A227.45
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A434.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A630.98
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A323.73
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H220.75
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I913.84
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D125.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D227.53
GP2+ M cell, pool1.CNhs13228.11845-124H962.02
GP2+ M cell, pool2.CNhs13231.11846-124I155.14
GP2+ M cell, pool3.CNhs13240.11847-124I245.03
Ileum epithelium, pool1.CNhs13199.10252-104B923.94
Ileum epithelium, pool2.CNhs13232.10253-104C141.33
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C823.73
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I316.51
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G617.84
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F516.18
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F616.12
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F723.07
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G866.55
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H161.73
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H358.11
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G985.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H296.99
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H469.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D821.40
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D919.87
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B325.88
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B75.48
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.45
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B88.79
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.22
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.86
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A237.08
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I928.29
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A134.28
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C113.12
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E117.19
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C513.92
Mouse Granule cells, donor1.CNhs12131.11713-123C318.82
Mouse Granule cells, donor2.CNhs12357.11731-123E316.40
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C69.83
Mouse Meningeal cells, donor3.CNhs12109.11639-122D17.11
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C79.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E712.86
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D211.37
Mouse Microglia, donor1.CNhs12629.11718-123C810.19
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D525.61
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F518.50
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D918.30
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.50
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D217.15
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F216.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.95
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D313.21
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F315.96
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D718.89
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D418.60
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F413.54
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D822.92
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.89
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I616.81
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D613.26
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.81
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E120.13
Mouse Schwann, donor1.CNhs12507.11728-123D914.01
Mouse Schwann, donor2.CNhs12573.11746-123F913.83
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G317.10
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F712.05
Mouse hepatocyte, donor1.CNhs13078.11714-123C417.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C813.49
Mouse hepatocyte, donor6.CNhs13090.11822-124F49.10
Mouse hepatocyte, donor8.CNhs13091.11824-124F613.44
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A717.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I726.93
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E319.22
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I819.79
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G630.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H129.52
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I820.38
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B635.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.85
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G211.15
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.07
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B625.23
accessory axillary lymph node, adult.CNhs10475.1063-29H912.17
adrenal gland, adult.CNhs10508.49-24D721.82
adrenal gland, embryo E14.CNhs11038.406-44C518.56
adrenal gland, embryo E16.CNhs11004.1254-43D614.31
adrenal gland, embryo E17.CNhs11043.1263-45I120.52
adrenal gland, embryo E18.CNhs11026.1262-18F522.61
adrenal gland, neonate N00.CNhs11191.1311-23C122.46
adrenal gland, neonate N25.CNhs11223.1377-27I323.25
amnion, adult pregnant day17.5.CNhs10488.583-22A825.71
aorta, adult.CNhs10498.46-23H122.27
bone (os femoris), adult.CNhs10483.56-12G214.15
bone (os femoris), neonate N02.CNhs11227.1985-43F527.18
bone (os femoris), neonate N16.CNhs11225.1525-43A629.37
bone (os femoris), neonate N20.CNhs11195.1350-25C325.70
cecum, adult.CNhs10467.37-13H416.78
cerebellum, adult.CNhs10494.15-8B231.91
cerebellum, neonate N30.CNhs11135.1395-42I241.05
colon, adult.CNhs10468.36-18H736.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C722.76
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D19.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D423.13
corpora quadrigemina, adult.CNhs10501.16-22A417.53
corpus striatum, adult.CNhs10487.19-21D811.90
corpus striatum, neonate N00.CNhs11226.630-43F124.63
cortex, adult.CNhs10473.12-14D517.56
cortex, neonate N30.CNhs11107.1392-42F223.78
diencephalon, adult.CNhs10482.20-12F215.17
diencephalon, neonate N30.CNhs11201.1388-42B217.68
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B128.01
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A226.62
epididymis, adult.CNhs10490.58-23B214.15
eyeball, adult.CNhs10484.31-12G429.25
eyeball, embryo E12.CNhs11016.345-16C624.07
eyeball, embryo E14.CNhs10521.399-16E222.76
eyeball, embryo E15.CNhs10593.426-16C919.99
eyeball, embryo E17.CNhs11023.1261-18D430.14
eyeball, neonate N00.CNhs11207.633-15C637.42
eyeball, neonate N01.CNhs11140.1532-43E738.43
eyeball, neonate N02.CNhs11205.1551-44G844.41
eyeball, neonate N16.CNhs11188.777-19A229.49
forelimb, embryo E11.CNhs10596.335-25E216.60
forelimb, embryo E12.CNhs10600.359-14H224.96
forelimb, embryo E13.CNhs10589.384-1E228.50
forelimb, embryo E14.CNhs10577.413-26A822.36
forelimb, embryo E15.CNhs11007.437-20E730.86
forelimb, embryo E17.CNhs10598.1517-43C431.69
forelimb, embryo E18.CNhs11008.1520-43B528.60
gonad, embryo E13.CNhs11044.1564-45I625.87
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C87.02
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.69
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D514.49
heart, embryo E11.CNhs10586.331-24E922.99
heart, embryo E12.CNhs11015.353-12F517.59
heart, embryo E13.CNhs11013.376-3I918.19
heart, embryo E14.CNhs10597.403-26D424.86
heart, embryo E15.CNhs11017.431-16C826.76
heart, embryo E16.CNhs11021.457-17C625.15
heart, embryo E17.CNhs11025.479-18E521.86
heart, embryo E18.CNhs11030.1283-20G329.24
heart, neonate N00.CNhs11213.639-21E322.07
heart, neonate N03.CNhs11221.1349-25I224.19
heart, neonate N10.CNhs11118.749-24G122.16
heart, neonate N16.CNhs11209.782-15G128.46
heart, neonate N20.CNhs11127.821-26I629.39
heart, neonate N25.CNhs11196.1351-25D320.64
heart, neonate N30.CNhs11202.1390-42D221.34
hippocampus, adult.CNhs10478.13-16E817.24
hippocampus, neonate N00.CNhs11228.627-43G123.46
intestinal mucosa, adult.CNhs10506.860-29I370.05
intestine, adult.CNhs10496.178-9A326.71
intestine, embryo E12.CNhs11019.1251-16I521.12
intestine, embryo E13.CNhs11010.381-16D528.33
intestine, embryo E15.CNhs10602.976-16D822.55
intestine, embryo E16.CNhs10585.463-22H422.59
intestine, embryo E17.CNhs10582.482-18D322.02
intestine, embryo E18.CNhs10526.1289-20F726.06
intestine, neonate N00.CNhs11126.644-26D141.76
intestine, neonate N01.CNhs11192.1322-23E920.59
intestine, neonate N06.CNhs11102.688-20B832.17
intestine, neonate N07.CNhs11095.720-20F230.04
intestine, neonate N10.CNhs11098.755-23A531.58
intestine, neonate N20.CNhs11187.827-18D133.26
intestine, neonate N25.CNhs11121.1352-25E331.99
intestine, neonate N30.CNhs11131.1384-42G145.01
kidney, embryo E14.CNhs10606.411-4I913.09
kidney, embryo E15.CNhs10997.434-16F823.08
kidney, embryo E16.CNhs10584.464-22A522.54
kidney, embryo E17.CNhs11028.483-18I223.62
kidney, embryo E18.CNhs11001.1288-20C726.96
kidney, neonate N00.CNhs11214.646-21G726.86
kidney, neonate N10.CNhs11206.758-6D530.61
kidney, neonate N20.CNhs11113.832-19I123.62
kidney, neonate N25.CNhs11122.1353-25F321.82
kidney, neonate N30.CNhs11203.1385-42H121.10
liver, adult pregnant day01.CNhs10466.508-5B212.45
liver, embryo E12.CNhs10601.355-15F820.69
liver, embryo E13.CNhs10524.378-3H621.62
liver, embryo E14.CNhs10594.409-16E118.21
liver, embryo E15.CNhs10520.433-16D725.36
liver, embryo E16.CNhs10523.462-17F527.49
liver, embryo E17.CNhs10510.481-18A327.50
liver, embryo E18.CNhs10579.499-43G426.18
liver, neonate N00.CNhs11117.641-24F421.08
liver, neonate N03.CNhs11123.1345-25G218.12
liver, neonate N06.CNhs11101.684-20A835.94
liver, neonate N07.CNhs11103.716-20H227.91
liver, neonate N10.CNhs11115.751-24B924.34
liver, neonate N20.CNhs11220.823-25A319.20
liver, neonate N25.CNhs11198.1368-26H118.30
liver, neonate N30.CNhs11106.1382-42D119.30
lung, adult.CNhs10474.28-22B123.65
lung, embryo E12.CNhs10522.354-16G221.98
lung, embryo E14.CNhs10604.404-26F826.24
lung, embryo E15.CNhs11020.432-17C522.24
lung, embryo E16.CNhs10998.458-17B624.17
lung, embryo E17.CNhs10605.480-44A631.32
lung, embryo E18.CNhs10583.1287-20I624.04
lung, neonate N00.CNhs11224.640-42C634.15
lung, neonate N06.CNhs11212.683-20E528.53
lung, neonate N07.CNhs11111.715-19A333.66
lung, neonate N10.CNhs11219.750-23E637.63
lung, neonate N20.CNhs11109.822-18A433.43
lung, neonate N25.CNhs11119.1359-25C731.95
lung, neonate N30.CNhs11133.1394-42H232.55
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A115.08
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A114.69
mammary gland, adult lactating day02.CNhs10480.595-22B619.67
mammary gland, adult pregnant day19.CNhs10476.588-5H224.01
medulla oblongata, adult.CNhs10477.17-12C214.93
medulla oblongata, neonate N30.CNhs11200.1396-42A319.46
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C724.92
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C228.28
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E116.09
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E215.62
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E326.28
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D719.60
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D824.95
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D926.61
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D419.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D521.04
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D622.93
olfactory brain, adult.CNhs10489.18-22I927.63
ovary, adult.CNhs10507.91-2I720.01
ovary, embryo E18.CNhs11040.505-44H725.64
ovary, neonate N00.CNhs11217.1299-22I429.16
oviduct, adult pregnant day01.CNhs10500.988-6G623.76
pancreas, adult.CNhs10486.34-16E418.58
pancreas, embryo E14.CNhs11012.405-44F418.94
pancreas, embryo E15.CNhs11042.1556-45F216.33
pancreas, embryo E16.CNhs11003.460-26E519.24
pancreas, embryo E17.CNhs10599.1558-45G314.47
pancreas, embryo E18.CNhs10580.1535-43I722.14
pancreas, neonate N00.CNhs11105.645-26G934.63
pancreas, neonate N01.CNhs11138.1531-43D722.90
pancreas, neonate N02.CNhs11139.1539-43D819.96
pancreas, neonate N16.CNhs11136.787-43B628.13
pancreas, neonate N25.CNhs11094.1555-45E224.25
pancreas, neonate N30.CNhs11182.1548-44H517.53
pituitary gland, adult.CNhs10493.21-1G820.09
pituitary gland, embryo E12.CNhs11018.346-16E626.11
pituitary gland, embryo E13.CNhs11009.370-44C723.28
pituitary gland, embryo E14.CNhs11037.398-44A532.15
pituitary gland, embryo E15.CNhs10592.427-16B928.73
pituitary gland, embryo E16.CNhs11036.449-43F634.25
pituitary gland, embryo E17.CNhs11039.1265-44F531.43
pituitary gland, neonate N00.CNhs11190.1308-22E926.49
placenta, adult pregnant day10.CNhs10472.539-13I718.54
placenta, adult pregnant day17.CNhs10464.577-18G319.91
prostate, adult.CNhs10470.859-1F818.74
skin, adult.CNhs10492.30-1C331.99
skin, neonate N00.CNhs11124.650-25G431.32
skin, neonate N03.CNhs11215.662-22H339.50
skin, neonate N06.CNhs11097.693-20I537.24
skin, neonate N10.CNhs11108.762-6C438.74
small intestine, neonate N16.CNhs11114.790-21I141.10
spinal cord, adult.CNhs10505.24-13C915.95
spleen, adult.CNhs10465.25-2G222.90
spleen, embryo E16.CNhs11035.461-43C129.93
spleen, embryo E18.CNhs11011.1271-21F232.04
spleen, neonate N10.CNhs11116.752-24D131.46
spleen, neonate N20.CNhs11112.824-19H128.43
spleen, neonate N25.CNhs11099.1354-25G335.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C621.59
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C925.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D324.18
stomach, adult.CNhs10503.33-1H610.50
stomach, embryo E12.CNhs10588.356-43E321.51
stomach, embryo E15.CNhs10603.1252-16G827.45
stomach, embryo E16.CNhs11022.459-17D428.08
stomach, embryo E17.CNhs11006.1035-18D530.32
stomach, embryo E18.CNhs10999.1286-20C621.62
stomach, neonate N03.CNhs11193.1340-24B822.52
stomach, neonate N07.CNhs11210.718-18A931.41
stomach, neonate N25.CNhs11104.1355-25E423.82
stomach, neonate N30.CNhs11134.1386-42I126.57
submandibular gland, adult.CNhs10469.59-29C123.61
testis, adult.CNhs10504.57-7G515.22
testis, embryo E13.CNhs11031.389-23F526.31
testis, embryo E15.CNhs11034.443-27C521.68
testis, embryo E16.CNhs11033.470-26G530.53
testis, embryo E17.CNhs11029.486-18I526.22
testis, embryo E18.CNhs11027.503-18G528.72
testis, neonate N00.CNhs11189.1300-22B727.34
testis, neonate N07.CNhs11222.726-26I422.26
testis, neonate N10.CNhs11204.763-44D928.00
testis, neonate N20.CNhs11110.839-18H328.51
testis, neonate N30.CNhs11130.1391-42E227.36
thymus, adult.CNhs10471.38-12B528.12
thymus, embryo E14.CNhs11041.402-44I421.89
thymus, embryo E15.CNhs11005.430-45I219.00
thymus, embryo E16.CNhs11002.456-26C522.22
thymus, embryo E17.CNhs10581.478-18C125.96
thymus, embryo E18.CNhs10595.1273-19G428.01
thymus, neonate N02.CNhs11181.1541-43F832.45
thymus, neonate N03.CNhs11137.2104-43C734.56
thymus, neonate N06.CNhs11197.681-26C434.03
thymus, neonate N07.CNhs11211.713-19D338.79
thymus, neonate N10.CNhs11194.748-24E435.89
thymus, neonate N20.CNhs11186.820-7A240.64
thymus, neonate N25.CNhs11125.1362-25G748.11
thymus, neonate N30.CNhs11132.1393-42G251.78
tongue, adult.CNhs10499.32-1B429.47
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H319.76
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F713.46
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G511.42
urinary bladder, adult.CNhs10481.879-12E419.90
uterus, adult pregnant day19.CNhs10497.590-15F521.77
uterus, adult.CNhs10509.92-27E526.74
vagina, adult.CNhs10502.89-27D533.44
vesicular gland, adult.CNhs10491.51-27F819.56
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.30
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.05
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.74
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D711.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A412.33
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A618.23
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A714.86
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A813.59
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A918.12
whole body, embryo E11.CNhs11014.324-5I824.29
whole body, embryo E12.CNhs10587.857-27C922.35
whole body, embryo E13.CNhs10512.372-23H221.00
whole body, embryo E14.5.CNhs10578.420-27D225.53
whole body, embryo E14.CNhs10519.395-14B120.96
whole body, embryo E16.CNhs10514.453-14F225.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G517.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G521.22
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G522.46
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G525.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G517.74
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G519.81
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G525.85
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G523.05
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G527.05
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G525.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G526.07
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G530.87
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G521.02
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G523.26
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G522.29
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G524.14
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G530.52
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G523.11
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G521.93
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G524.37
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G521.95
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G519.73
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G526.89
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G518.52
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G525.03
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G527.88
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G518.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G528.51
whole body, embryo E17.5.CNhs10513.490-9F924.88
whole body, embryo E17.CNhs10517.475-3I518.24
whole body, embryo E18.CNhs10516.493-3B322.69
whole body, neonate N00.CNhs10525.657-19C223.42
whole body, neonate N01.CNhs10576.659-23C621.04
whole body, neonate N06.CNhs10515.692-21D128.46
whole body, neonate N10.CNhs10518.761-6B416.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr19:4397052..4397098,-&oldid=2348398"