FFCP PHASE1:Mm9::chr17:88049772..88049788,+: Difference between revisions
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|id=chr17:88049772..88049788,+ | |id=chr17:88049772..88049788,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.38e-10!25;CL:0002563!3.94e-10!9;CL:0002251!3.94e-10!9;CL:0002076!6.02e-10!15;CL:0000075!6.67e-08!7;CL:0000239!5.30e-07!6;CL:0000677!5.30e-07!6;CL:0000212!5.30e-07!6;CL:0000584!5.30e-07!6 | |ontology_enrichment_celltype=CL:0000066!1.38e-10!25;CL:0002563!3.94e-10!9;CL:0002251!3.94e-10!9;CL:0002076!6.02e-10!15;CL:0000075!6.67e-08!7;CL:0000239!5.30e-07!6;CL:0000677!5.30e-07!6;CL:0000212!5.30e-07!6;CL:0000584!5.30e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.86e-11,15;CL:0000066,1.38e-10,25;CL:0002563,8.15e-10,9;CL:0002251,8.15e-10,9;CL:0000223,3.02e-08,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.88e-24!43;UBERON:0005409!6.35e-23!59;UBERON:0000344!2.21e-17!15;UBERON:0001242!6.88e-15!13;UBERON:0000060!6.88e-15!13;UBERON:0001262!6.88e-15!13;UBERON:0004786!6.88e-15!13;UBERON:0000485!7.67e-12!11;UBERON:0004923!2.23e-11!24;UBERON:0004119!4.38e-11!130;UBERON:0000925!4.38e-11!130;UBERON:0006595!4.38e-11!130;UBERON:0001007!7.55e-11!128;UBERON:0001555!7.55e-11!128;UBERON:0007026!7.55e-11!128;UBERON:0003350!3.94e-10!9;UBERON:0004808!3.94e-10!9;UBERON:0001277!3.94e-10!9;UBERON:0004921!1.51e-09!126;UBERON:0004185!1.51e-09!126 | |ontology_enrichment_uberon=UBERON:0000160!1.88e-24!43;UBERON:0005409!6.35e-23!59;UBERON:0000344!2.21e-17!15;UBERON:0001242!6.88e-15!13;UBERON:0000060!6.88e-15!13;UBERON:0001262!6.88e-15!13;UBERON:0004786!6.88e-15!13;UBERON:0000485!7.67e-12!11;UBERON:0004923!2.23e-11!24;UBERON:0004119!4.38e-11!130;UBERON:0000925!4.38e-11!130;UBERON:0006595!4.38e-11!130;UBERON:0001007!7.55e-11!128;UBERON:0001555!7.55e-11!128;UBERON:0007026!7.55e-11!128;UBERON:0003350!3.94e-10!9;UBERON:0004808!3.94e-10!9;UBERON:0001277!3.94e-10!9;UBERON:0004921!1.51e-09!126;UBERON:0004185!1.51e-09!126 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.22e-31,31;UBERON:0000344,5.20e-29,15;UBERON:0005409,2.39e-22,47;UBERON:0001242,4.27e-22,13;UBERON:0001262,4.27e-22,13;UBERON:0004786,4.27e-22,13;UBERON:0004923,2.04e-17,24;UBERON:0002108,4.34e-16,4;UBERON:0000331,7.39e-13,3;UBERON:0002116,7.39e-13,3;UBERON:0001204,7.39e-13,3;UBERON:0001168,7.39e-13,3;UBERON:0001007,4.18e-12,116;UBERON:0001555,4.18e-12,116;UBERON:0007026,4.18e-12,116;UBERON:0004119,7.78e-12,118;UBERON:0000925,7.78e-12,118;UBERON:0006595,7.78e-12,118;UBERON:0003350,8.15e-10,9;UBERON:0004808,8.15e-10,9;UBERON:0001277,8.15e-10,9;UBERON:0004921,1.32e-09,114;UBERON:0001962,3.06e-09,2;UBERON:0001961,3.06e-09,2;UBERON:0001744,3.06e-09,2;UBERON:0001155,1.78e-08,2;UBERON:0000059,1.78e-08,2;UBERON:0000485,5.39e-08,11 | |||
|phase1_expression=0.480446541314382,0.348975407639361,0.454999239389536,1.20985684522732,1.00179145989269,0.671517087647559,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.71968175732308,6.65286915094793,1.14846392823004,0.86152399231815,3.01659725760245,10.2612646506442,4.78857246543868,2.88249663851896,0,0,0,1.44425809875637,0.997407872150954,2.04169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704217098883403,0,0,0,2.38140145112336,0.760079596425296,3.53867111510348,0.5709193985953,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,1.86391761218122,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.758168275301024,0,0,0.229902104433473,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,0.264450566663544,0,0,0.128867461322093,0.403367049246685,0.22237804384487,0,1.42358718463353,1.97638745668813,1.50801125280162,0.397912944082302,0.779856348476481,0.898819408654221,2.59365659849633,1.39398891278057,0.569003702859245,0,0,0,0,0.140271639780637,0.0632365371242573,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339490171550376,0.234690248288502,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0.485561272309963,0.604647113929502,0.377210159511796,0.295301892880773,0.307435147943927,0,0.363533729477506,0,0,0,0,0,0.36012218806262,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0.328281799490123,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0.436725127492355,0.134864346384821,0,0.26175594198403,1.16653475962614,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0.100826185136841,0.0974578807397524,0,0,0,0.221985953374065,0,0.335769232728157,0,0,0.183151624267265,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0.342869252385415,0,0.238436189947321,0,0.0941093804153306,0,0,0,0,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0 | |phase1_expression=0.480446541314382,0.348975407639361,0.454999239389536,1.20985684522732,1.00179145989269,0.671517087647559,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.71968175732308,6.65286915094793,1.14846392823004,0.86152399231815,3.01659725760245,10.2612646506442,4.78857246543868,2.88249663851896,0,0,0,1.44425809875637,0.997407872150954,2.04169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704217098883403,0,0,0,2.38140145112336,0.760079596425296,3.53867111510348,0.5709193985953,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,1.86391761218122,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.758168275301024,0,0,0.229902104433473,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,0.264450566663544,0,0,0.128867461322093,0.403367049246685,0.22237804384487,0,1.42358718463353,1.97638745668813,1.50801125280162,0.397912944082302,0.779856348476481,0.898819408654221,2.59365659849633,1.39398891278057,0.569003702859245,0,0,0,0,0.140271639780637,0.0632365371242573,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339490171550376,0.234690248288502,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0.485561272309963,0.604647113929502,0.377210159511796,0.295301892880773,0.307435147943927,0,0.363533729477506,0,0,0,0,0,0.36012218806262,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0.328281799490123,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0.436725127492355,0.134864346384821,0,0.26175594198403,1.16653475962614,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0.100826185136841,0.0974578807397524,0,0,0,0.221985953374065,0,0.335769232728157,0,0,0.183151624267265,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0.342869252385415,0,0.238436189947321,0,0.0941093804153306,0,0,0,0,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:88049772..88049788,+ | |short_description=p@chr17:88049772..88049788,+ | ||
}} | }} |
Revision as of 01:34, 15 November 2012
Short description: | p@chr17:88049772..88049788, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:88049772..88049788, + |
Coexpression cluster: | MCL_coexpression_mm9:358 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.86e-11 | 15 |
epithelial cell | 1.38e-10 | 25 |
intestinal epithelial cell | 8.15e-10 | 9 |
epithelial cell of alimentary canal | 8.15e-10 | 9 |
endodermal cell | 3.02e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.22e-31 | 31 |
mucosa | 5.20e-29 | 15 |
gastrointestinal system | 2.39e-22 | 47 |
intestinal mucosa | 4.27e-22 | 13 |
wall of intestine | 4.27e-22 | 13 |
gastrointestinal system mucosa | 4.27e-22 | 13 |
organ component layer | 2.04e-17 | 24 |
small intestine | 4.34e-16 | 4 |
ileal mucosa | 7.39e-13 | 3 |
ileum | 7.39e-13 | 3 |
mucosa of small intestine | 7.39e-13 | 3 |
wall of small intestine | 7.39e-13 | 3 |
digestive system | 4.18e-12 | 116 |
digestive tract | 4.18e-12 | 116 |
primitive gut | 4.18e-12 | 116 |
endoderm-derived structure | 7.78e-12 | 118 |
endoderm | 7.78e-12 | 118 |
presumptive endoderm | 7.78e-12 | 118 |
epithelium of mucosa | 8.15e-10 | 9 |
gastrointestinal system epithelium | 8.15e-10 | 9 |
intestinal epithelium | 8.15e-10 | 9 |
subdivision of digestive tract | 1.32e-09 | 114 |
gut-associated lymphoid tissue | 3.06e-09 | 2 |
mucosa-associated lymphoid tissue | 3.06e-09 | 2 |
lymphoid tissue | 3.06e-09 | 2 |
colon | 1.78e-08 | 2 |
large intestine | 1.78e-08 | 2 |
simple columnar epithelium | 5.39e-08 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.