FFCP PHASE1:Mm9::chr3:135359806..135359811,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr3:135359806..135359811,- | |id=chr3:135359806..135359811,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!8.82e-38!23;UBERON:0000974!8.82e-38!23;UBERON:0004807!8.82e-38!23;UBERON:0005058!8.82e-38!23;UBERON:0003351!8.82e-38!23;UBERON:0009113!8.82e-38!23;UBERON:0003295!8.82e-38!23;UBERON:0009722!8.82e-38!23;UBERON:0005562!8.82e-38!23;UBERON:0007690!8.82e-38!23;UBERON:0006562!3.53e-36!24;UBERON:0003408!3.53e-36!24;UBERON:0001557!3.53e-36!24;UBERON:0001042!3.53e-36!24;UBERON:0008814!3.53e-36!24;UBERON:0009145!3.53e-36!24;UBERON:0000072!4.40e-32!27;UBERON:0004177!8.02e-30!29;UBERON:0000063!1.39e-24!35;UBERON:0000065!7.16e-21!41;UBERON:0001004!2.35e-20!42;UBERON:0002390!6.06e-19!45;UBERON:0003061!6.06e-19!45;UBERON:0002193!1.04e-17!48;UBERON:0002368!9.70e-17!60;UBERON:0005057!1.29e-16!51;UBERON:0002530!2.20e-15!65;UBERON:0003929!2.41e-15!55;UBERON:0000949!8.48e-14!72;UBERON:0000490!1.23e-12!66;UBERON:0005911!4.81e-12!69;UBERON:0002405!7.37e-12!70;UBERON:0007811!1.81e-09!86;UBERON:0003081!3.14e-09!88;UBERON:0001041!8.77e-09!92;UBERON:0000153!1.42e-08!94;UBERON:0000077!2.82e-08!97;UBERON:0000064!4.35e-08!99;UBERON:0003104!4.12e-07!131;UBERON:0009142!4.12e-07!131 | |ontology_enrichment_uberon=UBERON:0002370!8.82e-38!23;UBERON:0000974!8.82e-38!23;UBERON:0004807!8.82e-38!23;UBERON:0005058!8.82e-38!23;UBERON:0003351!8.82e-38!23;UBERON:0009113!8.82e-38!23;UBERON:0003295!8.82e-38!23;UBERON:0009722!8.82e-38!23;UBERON:0005562!8.82e-38!23;UBERON:0007690!8.82e-38!23;UBERON:0006562!3.53e-36!24;UBERON:0003408!3.53e-36!24;UBERON:0001557!3.53e-36!24;UBERON:0001042!3.53e-36!24;UBERON:0008814!3.53e-36!24;UBERON:0009145!3.53e-36!24;UBERON:0000072!4.40e-32!27;UBERON:0004177!8.02e-30!29;UBERON:0000063!1.39e-24!35;UBERON:0000065!7.16e-21!41;UBERON:0001004!2.35e-20!42;UBERON:0002390!6.06e-19!45;UBERON:0003061!6.06e-19!45;UBERON:0002193!1.04e-17!48;UBERON:0002368!9.70e-17!60;UBERON:0005057!1.29e-16!51;UBERON:0002530!2.20e-15!65;UBERON:0003929!2.41e-15!55;UBERON:0000949!8.48e-14!72;UBERON:0000490!1.23e-12!66;UBERON:0005911!4.81e-12!69;UBERON:0002405!7.37e-12!70;UBERON:0007811!1.81e-09!86;UBERON:0003081!3.14e-09!88;UBERON:0001041!8.77e-09!92;UBERON:0000153!1.42e-08!94;UBERON:0000077!2.82e-08!97;UBERON:0000064!4.35e-08!99;UBERON:0003104!4.12e-07!131;UBERON:0009142!4.12e-07!131 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.45e-09,23;UBERON:0000974,8.45e-09,23;UBERON:0004807,8.45e-09,23;UBERON:0005058,8.45e-09,23;UBERON:0003351,8.45e-09,23;UBERON:0009113,8.45e-09,23;UBERON:0003295,8.45e-09,23;UBERON:0009722,8.45e-09,23;UBERON:0005562,8.45e-09,23;UBERON:0007690,8.45e-09,23;UBERON:0006562,1.75e-08,24;UBERON:0003408,1.75e-08,24;UBERON:0001557,1.75e-08,24;UBERON:0001042,1.75e-08,24;UBERON:0008814,1.75e-08,24;UBERON:0009145,1.75e-08,24;UBERON:0000072,1.12e-07,27;UBERON:0004177,3.14e-07,29;UBERON:0005057,3.14e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,1.62180172232131,1.95150818613172,0.649604114888975,0.895133478337407,0,0.240390899039938,0.147689527174577,0.201932899896295,0.228620419965,0,0.0974578807397524,0.192423683280659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,1.62180172232131,1.95150818613172,0.649604114888975,0.895133478337407,0,0.240390899039938,0.147689527174577,0.201932899896295,0.228620419965,0,0.0974578807397524,0.192423683280659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:135359806..135359811,- | |short_description=p@chr3:135359806..135359811,- | ||
}} | }} |
Revision as of 04:39, 15 November 2012
Short description: | p@chr3:135359806..135359811, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:135359806..135359811, - |
Coexpression cluster: | MCL_coexpression_mm9:129 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 8.45e-09 | 23 |
neck | 8.45e-09 | 23 |
respiratory system epithelium | 8.45e-09 | 23 |
hemolymphoid system gland | 8.45e-09 | 23 |
pharyngeal epithelium | 8.45e-09 | 23 |
thymic region | 8.45e-09 | 23 |
pharyngeal gland | 8.45e-09 | 23 |
entire pharyngeal arch endoderm | 8.45e-09 | 23 |
thymus primordium | 8.45e-09 | 23 |
early pharyngeal endoderm | 8.45e-09 | 23 |
pharynx | 1.75e-08 | 24 |
gland of gut | 1.75e-08 | 24 |
upper respiratory tract | 1.75e-08 | 24 |
chordate pharynx | 1.75e-08 | 24 |
pharyngeal arch system | 1.75e-08 | 24 |
pharyngeal region of foregut | 1.75e-08 | 24 |
segment of respiratory tract | 1.12e-07 | 27 |
hemopoietic organ | 3.14e-07 | 29 |
immune organ | 3.14e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.